mRNA_H-paniculata_contig2608.7122.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2608.7122.1
Unique NamemRNA_H-paniculata_contig2608.7122.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: D7FM85_ECTSI (KH_dom_type_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM85_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 6.210e-19
Identity = 41/58 (70.69%), Postives = 52/58 (89.66%), Query Frame = 3 
Query:  492 SGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTI 665
            SGD+++Q QV +PD++VGVILGK GATVI++QN +GARIQVSQRGEY+PGT NRAV +
Sbjct:    3 SGDMVSQMQVAIPDHLVGVILGKGGATVIDMQNQTGARIQVSQRGEYIPGTTNRAVWV 60
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BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: A0A6H5KV61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV61_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 6.290e-16
Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 3 
Query:  393 TGMPSMFP--FTPEIPIMATGSHQGQLSEHGYADVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNR 653
            TGM SM+P  +  E+ I+     QG   E      SGD+++Q QV +PD++VGVILGK GATVI++QN +GARIQVSQRGEY+PGT NR
Sbjct: 1022 TGMTSMYPSPYGGEVAIV-----QGHAPE--VVMDSGDMVSQMQVAIPDHLVGVILGKRGATVIDMQNQTGARIQVSQRGEYIPGTTNR 1103
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BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: A0A2G8L9G0_STIJA (Nova n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8L9G0_STIJA)

HSP 1 Score: 78.6 bits (192), Expect = 6.790e-14
Identity = 47/115 (40.87%), Postives = 68/115 (59.13%), Query Frame = 3 
Query:  330 SVSPMQHQRGYGDLPYPHGALTGMPSMFPFTPEIPIMATGSHQG-QLSEHGYADVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISG 671
            + +P+    G G +P  H AL      +PFT            G  LS    + V+ + + +  V+VP+ +VG ILGKSG T++E QN+SGA+IQ+S++GE+VPGT NR VTI G
Sbjct:   42 AATPVTIPMGTGHVPSGHEALM---QGYPFTSTFTAAPIQQFPGVALSTESPSHVAKENVVE--VEVPESLVGAILGKSGKTLVEFQNYSGAKIQISKKGEFVPGTRNRKVTIKG 151
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BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: UPI0014552079 (RNA-binding protein Nova-1-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014552079)

HSP 1 Score: 82.0 bits (201), Expect = 1.000e-13
Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 3 
Query:  378 PHGALTGMPSMFPFTPEIPIMATGSHQGQLSEHGYADVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISGTQQAVHHAQMMLHNLCTQAAQFEQRQA 752
            P G+LTGM +         + A    Q  +  H   D+S D + +  + VP+ +VG ILGK G T++E Q  SGA+IQ+S++GEYVPGT NR VTI+G   A + AQ+    +  + AQ EQ +A
Sbjct:  428 PMGSLTGMGAG--------LGAFSLQQDSIPTHSIKDISRDTILE--IDVPENLVGAILGKRGQTLVEFQTTSGAKIQISKKGEYVPGTRNRKVTITG---APNQAQLAHFFVTQKVAQEEQNRA 539
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BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: A0A835ZEM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEM4_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.890e-13
Identity = 53/122 (43.44%), Postives = 72/122 (59.02%), Query Frame = 3 
Query:  375 YPHGAL-TGMPSMFPFTPEIPIMATGSHQGQLSEHGYADVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISGTQQAVHHAQ-MMLHNLCTQAAQ 734
            YP G +  GMP + P  P++P+         + +H   DVS  V     V +PD ++GVILG+ G TV ELQ  +GARI VS+RG  +PGT +R VTI+G+  A H AQ MM+H +    AQ
Sbjct:  598 YPGGGMMVGMPVLAPVVPQMPM--------PMVQH--PDVSA-VATTIMVSIPDALIGVILGRGGVTVNELQMITGARISVSRRGNALPGTTDRVVTITGSAAAAHAAQYMMMHRVQEACAQ 708
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BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: UPI000A2A8354 (RNA-binding protein Nova-1 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8354)

HSP 1 Score: 79.3 bits (194), Expect = 4.680e-13
Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 3 
Query:  507 AQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISGTQQAVHHAQMMLHNLCTQAAQFEQRQAQGMMYPQQP 779
            A  ++ VPD ++G ILGK G T+ EL  +SGARIQVSQ+GE+VPGT+NR V I+G  QA      + H L TQ  Q  Q +A+ ++ PQ P
Sbjct:  278 ATLEITVPDELIGAILGKGGKTINELMQYSGARIQVSQKGEFVPGTNNRKVVITGDVQAA----QLAHFLITQRLQ--QVEAERLVNPQPP 362
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BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: A0A670XVA5_PSETE (KH domain-containing protein n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=A0A670XVA5_PSETE)

HSP 1 Score: 75.1 bits (183), Expect = 7.200e-13
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 3 
Query:  486 DVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISGTQQAVHHAQMMLHNLCTQAAQFEQ 743
            D S DV+   ++ VP+ +VG ILGK G T++E Q  +GARIQ+S++GE+VPGT NR VTI+GT  A   AQ ++    TQ   +EQ
Sbjct:   56 DGSKDVV---EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLI----TQRITYEQ 134
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BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: A0A3Q4HM21_NEOBR (Uncharacterized protein n=1 Tax=Neolamprologus brichardi TaxID=32507 RepID=A0A3Q4HM21_NEOBR)

HSP 1 Score: 75.9 bits (185), Expect = 1.010e-12
Identity = 36/70 (51.43%), Postives = 51/70 (72.86%), Query Frame = 3 
Query:  519 VQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISGTQQAVHHAQMMLHNLCTQA 728
            + VP+ +VG ILGK G T++E Q  +GARIQ+S++GE++PGT NR VTI+G+Q A   AQ ++  L T A
Sbjct:   97 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAAQYLISQLQTSA 166
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BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: A0A8C6YYB6_NOTPE (KH domain-containing protein n=1 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C6YYB6_NOTPE)

HSP 1 Score: 75.1 bits (183), Expect = 1.850e-12
Identity = 42/86 (48.84%), Postives = 58/86 (67.44%), Query Frame = 3 
Query:  486 DVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISGTQQAVHHAQMMLHNLCTQAAQFEQ 743
            D S DV+   ++ VP+ +VG ILGK G T++E Q  +GARIQ+S++GE+VPGT NR VTI+GT  A   AQ ++    TQ   +EQ
Sbjct:   82 DGSKDVV---EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLI----TQRITYEQ 160
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BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Match: UPI000695E587 (RNA-binding protein Nova-2 n=1 Tax=Chinchilla lanigera TaxID=34839 RepID=UPI000695E587)

HSP 1 Score: 72.4 bits (176), Expect = 2.390e-12
Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 3 
Query:  441 ATGSHQGQLSEHGYADVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARIQVSQRGEYVPGTHNRAVTISGTQQAVHHAQMMLHNLCT 722
            A G+  G L+    A  S   L +  + VP+ +VG ILGK G T++E Q  +GARIQ+S++GE++PGT NR VTI+G+  A   AQ ++    T
Sbjct:    6 AAGAAGGFLTAEKLAAESAKELVE--IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVT 97
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2608.7122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM85_ECTSI6.210e-1970.69KH_dom_type_1 domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KV61_9PHAE6.290e-1656.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2G8L9G0_STIJA6.790e-1440.87Nova n=1 Tax=Stichopus japonicus TaxID=307972 RepI... [more]
UPI00145520791.000e-1340.80RNA-binding protein Nova-1-like n=1 Tax=Asterias r... [more]
A0A835ZEM4_9STRA2.890e-1343.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI000A2A83544.680e-1349.45RNA-binding protein Nova-1 n=1 Tax=Exaiptasia diap... [more]
A0A670XVA5_PSETE7.200e-1348.84KH domain-containing protein n=1 Tax=Pseudonaja te... [more]
A0A3Q4HM21_NEOBR1.010e-1251.43Uncharacterized protein n=1 Tax=Neolamprologus bri... [more]
A0A8C6YYB6_NOTPE1.850e-1248.84KH domain-containing protein n=1 Tax=Nothoprocta p... [more]
UPI000695E5872.390e-1242.55RNA-binding protein Nova-2 n=1 Tax=Chinchilla lani... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2608contigH-paniculata_contig2608:6962..14066 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score89.7
Seed ortholog evalue2.1e-15
Seed eggNOG ortholog2880.D7FM85
KEGG koko:K14944
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009719,GO:0009725,GO:0009735,GO:0009987,GO:0010033,GO:0010467,GO:0016070,GO:0034641,GO:0042221,GO:0042592,GO:0043170,GO:0043900,GO:0043903,GO:0044237,GO:0044238,GO:0046483,GO:0046719,GO:0048878,GO:0050789,GO:0050792,GO:0050896,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363
EggNOG free text desc.RNA splicing
EggNOG OGsKOG2191@1,KOG2191@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Exons6
Model size925
Cds size783
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2608.7122.1prot_H-paniculata_contig2608.7122.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2608 7096..14058 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929778.2227058-UTR-H-paniculata_contig2608:6961..70951622929778.2227058-UTR-H-paniculata_contig2608:6961..7095Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2608 6962..7095 -
1691481006.783241-UTR-H-paniculata_contig2608:6961..70951691481006.783241-UTR-H-paniculata_contig2608:6961..7095Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2608 6962..7095 -
1622929778.3522766-UTR-H-paniculata_contig2608:14058..140661622929778.3522766-UTR-H-paniculata_contig2608:14058..14066Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2608 14059..14066 -
1691481006.8494055-UTR-H-paniculata_contig2608:14058..140661691481006.8494055-UTR-H-paniculata_contig2608:14058..14066Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2608 14059..14066 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929778.2368119-CDS-H-paniculata_contig2608:7095..72341622929778.2368119-CDS-H-paniculata_contig2608:7095..7234Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2608 7096..7234 -
1691481006.797089-CDS-H-paniculata_contig2608:7095..72341691481006.797089-CDS-H-paniculata_contig2608:7095..7234Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2608 7096..7234 -
1622929778.2547383-CDS-H-paniculata_contig2608:8329..84631622929778.2547383-CDS-H-paniculata_contig2608:8329..8463Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2608 8330..8463 -
1691481006.8050563-CDS-H-paniculata_contig2608:8329..84631691481006.8050563-CDS-H-paniculata_contig2608:8329..8463Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2608 8330..8463 -
1622929778.270509-CDS-H-paniculata_contig2608:10454..105321622929778.270509-CDS-H-paniculata_contig2608:10454..10532Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2608 10455..10532 -
1691481006.8136086-CDS-H-paniculata_contig2608:10454..105321691481006.8136086-CDS-H-paniculata_contig2608:10454..10532Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2608 10455..10532 -
1622929778.2859318-CDS-H-paniculata_contig2608:11309..114161622929778.2859318-CDS-H-paniculata_contig2608:11309..11416Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2608 11310..11416 -
1691481006.82205-CDS-H-paniculata_contig2608:11309..114161691481006.82205-CDS-H-paniculata_contig2608:11309..11416Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2608 11310..11416 -
1622929778.3226671-CDS-H-paniculata_contig2608:12769..130361622929778.3226671-CDS-H-paniculata_contig2608:12769..13036Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2608 12770..13036 -
1691481006.8307755-CDS-H-paniculata_contig2608:12769..130361691481006.8307755-CDS-H-paniculata_contig2608:12769..13036Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2608 12770..13036 -
1622929778.3373623-CDS-H-paniculata_contig2608:14000..140581622929778.3373623-CDS-H-paniculata_contig2608:14000..14058Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2608 14001..14058 -
1691481006.8400383-CDS-H-paniculata_contig2608:14000..140581691481006.8400383-CDS-H-paniculata_contig2608:14000..14058Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2608 14001..14058 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2608.7122.1

>prot_H-paniculata_contig2608.7122.1 ID=prot_H-paniculata_contig2608.7122.1|Name=mRNA_H-paniculata_contig2608.7122.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=261bp
MSGLGGSGLGGMVGGPGVPGWPVAHGHTNTWGGVPEVETGPSNSNSRHGQ
AKGSGANCGAAAGGGSGSGAGGGGANAMGMAAQQQQLQHQQGMMAPGSMV
YPGYHPYSVSPMQHQRGYGDLPYPHGALTGMPSMFPFTPEIPIMATGSHQ
GQLSEHGYADVSGDVLAQTQVQVPDYMVGVILGKSGATVIELQNHSGARI
QVSQRGEYVPGTHNRAVTISGTQQAVHHAQMMLHNLCTQAAQFEQRQAQG
MMYPQQPPFY*
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mRNA from alignment at H-paniculata_contig2608:6962..14066-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2608.7122.1 ID=mRNA_H-paniculata_contig2608.7122.1|Name=mRNA_H-paniculata_contig2608.7122.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7105bp|location=Sequence derived from alignment at H-paniculata_contig2608:6962..14066- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGGGTGATATGAGCGGCCTTGGCGGGTCGGGGCTCGGGGGCATGGTAGGA
GGGCCCGGGGTACCAGGTAAGAAAATTCGGGGTTGAGCTTAAGGGATAAG
TGTGCAGGGGTGACCAAGGACCTATTGAATGATATTGTTTACGACTCACG
CAACAAATTCAACATGGATTGTAACATTAACTTGATCGCTCACGTGTACT
AATAAAGCACGTAACACTGCTCATGCTAACTATGTGATGTAGAAATGCAA
CGAGCAGAACACACGCCTATACCTAGGAAGAAAACATCGACAAACAGTTC
GCTCACCTGGCAACTTGTATTTTTGTTCGAGGTATGTGTTGTTATCACAC
TGGGGTTGTGCAAGTTTGCATTCATAGCTACATCTCTTTGTCAGCAGTGG
TGGGCATCTGGTGCGTCATCTACGCACAGCGCATTTTTTATGGTATATGC
TATCGATCACTGAGATTTGTCACTCTTCTTTGCAATCAATGATCAGGGGG
GGCAGGTCTAGCTGGTGCTCGTCATGATCCAAACGTTTCTTGCTATCGAC
AGCAATTATTGTTCCCAAATATGGTGTGTTCTTCCCTTGAAGACGCCTTG
CCCTTTCAAAGACGCCTTGCCCTTTCAAAGACTTCATTTTATTGACAAGC
ACTTCTAGACATTACCTTGCCCCTCCCACAAACCCACCCCGCGCGGACCC
CGCCCCAATCCCCCTGGAGGCAATGCCCCGTCCCTTCGACGAGGCGTAGT
CATACTCCAACAGCCAAGGCGTACACAGAATTAGCACCCTCCTTTGCCTC
AGTCTTGAGACTGGTGACCGGTTTCAAGTATGCACGAGACCGCTTTCGAA
CAAATTGTAATATGTGTTGAACTTTCATCACAGTTGGAATTCATGGTGAT
CTATTTAATTTTTATACGAACAGACGTTCAAACGTTTTTTCATGCTTACT
ACTAAATATTCCACCACGGAGAGTTAGAACCCACCCATCCAATCAACCGC
CTCCGCGCCTACCGTCGCCCCCGAGAATAGGTTGGCCAGTGGCCCACGGA
CACACCAACACCTGGGGAGGCGTGCCGGAAGTTGAGACTGGCCCATCCAA
TAGCAATTCAAGACACGGGCAAGCGAAGGGCAGTGGCGCAAATTGCGGGG
CCGCAGCCGGCGGAGGCAGCGGTAGCGGAGCGGGGGGTGGTGGAGCGAAT
GCAATGGGAATGGCAGCACAACAGCAACAGCTCCAGCACCAGCAAGGCAT
GATGGCCCCTGGAAGCATGGTGTACCCGGGCTACCATCCGTATTCTGGTA
AGTACTGCAGCGGAGGCGGTACTGCGTGCTCATTTTCGAGCGTTTACGTT
TGCTTTTACGTACCGTTGTGAAATATTTGTTGTGTCTGCATCGAAGCGAG
GGCGTCGTGAAGGATAGTGTAGTCTGCGTGAAGACTGTTGCGCGCAGGGT
GTGTTCGGACACGCTCGATCTTGATACACGTGGGGTGAGTGTGGGAGATC
GGCAGGGTGCGGGAGGGGGGGCTGACGGGCGGACGAGTCATTCCCATACT
GTACTACACTCAATTGTATTTAACGGCGCGCAAACGTAGAGATAAATAGC
GATTTGATAGGGGGGGGTCTATGTGAGACACATGCAGCTGCCTTCCAAAA
TGTGTGAAGGTCTGCATGCACGTGTCAAGCAAACAACTGAACTGACGCGG
GTAGGCAACGAGGCGAAAATATGAATTATCGAGCCGTTTTGCAACTATAC
AGTGATGACTACACCTTTAGCGGCCGGAGGATGTTCGGTGTCCACCGTAG
GCGGCGCCAAGCCTCCCAGAGGGGAACATTTTGAGGTTATAGCCCTACTA
CATTCCCTTTTCCTTGATTTCCGAAGCCCCCAGGTCTCTAAAAAGAATGG
ATTTTGTATCATCGCCACATGGATTAAAAATTCGTTGTTATCGCAGTATT
GTACTCGAAACAACGGGACCCTTTTTCGGCATTACGAACTGACTGGTACA
ATCAATACACCGTTACTCAGTCCAGTCACGACACAGCTCGCGACTTTTCG
AGCCGAACACCACGCGAATGAGTCGGTCTATGTTGTAGTTATTTCTTCTT
TGATCGCGAGGATTCCAGGGCAAAATTTTCTCTGGCGCTTGAAGTGGGGA
TGTTTCGTCCAGCTCGATCGTCAGTTCTCTTATGATATGTATTGGTGTTT
CATGTATATTGTGAAGGTTATTCCATTTTTAAGTCATATTGATTGTGCAC
TGTTTGACAGTCGTCGGGATCGGCCCAGCACCTTCGACTTTGCGCCGATT
CAGCGACCGCACGTCCCAGTACGTTTGGCGCCCTGAAGCCAGTGGAGCCG
CAAGTCCGTTATCTCCCATTTGTTTTCAGCGCTTGGGCAAGGTGCCGACG
CTTGCCCTCTTATCATTGTGCATGCACACCTAGTACGTCGCTTTTTTACG
ATTTGCTGGGCTCAGTAATCACGACTTCACGGGGGCATTGCAACGATTTG
CAAACAATATAGAAGAGACTCCTTACTTTCGTGACAGCGTGAAAATCAGA
TCACCATATCCGGAGCATCCCTGCTGCCGCTGTTTGTTGCTGTCTGCTGT
TCTCGACGTCGCCCCACCCCGGACTCAACGGATACACCTTGTGCATCCAG
TGTCTCCGATGCAGCACCAACGTGGGTACGGAGATTTGCCATACCCTCAT
GGTGCCTTGACAGGAATGCCTTCTATGTTTCCTTTTACTCCGGAGATACC
CATTATGGTGAGGCTGTGTTTTGGGTACACTCTTGGTATGTCGACAGTGT
GGAGTTCATTTCAGAAGCTACTAGTTACACTTCAAGTACCTCTCCCCGCT
TTTACGACTTCTTAGGTGTCAAACTCTCTTACTGGGGCTCTCACCGCATT
TTGGCACTTGCTATGTTAGCGTATCTGTTGCTGGGAAGAATTAAAGTAAT
CTAAGGCAGCTCTGTACTCACAGGGAAATTTACCCCTGCTCTTTGGAGCT
TGTGGAGGGTTAGCAGCTGTGTTTTCCAAGCGCAAGTATTTCCGCCTTGA
CAATATAGATTGCTGGAGAAGTTGTTGTACCGCAAAATGAAATGGCTATG
TCGGCTTCGTTGTCTAGCGCAGCACGGCATGGGTGTTTGGTAAACTCGAG
TTACACCTGTTGCTGGAGACCGCGAATTGGCGCGCAAAGAGTTGGCAAGA
TTGACGCTGTGCGAAAAAGCTGTCCGCGCTTTGAACAGCAGATACGATCG
TGTACCTAGCATTGGCTTGGAATCGTAGATGGGATTGACCAATGCCGGTT
ATCGTCCAGCGTGGCTTCATGAAGTTACCAAGAGGGGATAACGTATGAAG
CTCTTGACATGCACACATTGAACGACAATAGTAGCTGTCACATCAACCGC
ATCAACAGTAATCGTAAGAGTGACATTTCCCATTGCGTTCGTTTTTACGT
GTCCACCTTGTTACCAAAATATACCAAAATGTAATGTTGCATCGACCGTG
TCAACTTGTTTTTTCGTGCCGGTTTGCTCTGAAGGCGACGGGCTCACACC
AAGGCCAGCTGTCTGAACATGGCTACGCTGATGTTAGTGGAGATGTGCTT
GCACAGACGCAGGTAGGTGTGAATCCATTTAACATGCACACCATTTTCGG
GGAGGACAAAGGTCACGTCCTGCTGAAAAATAAACTGAATATCGAGAACT
GCAGTGTGAATAAATTTGAGCTTTTGCCGAGAAAATGGCCTCTCAAATAC
GAAAATACTATCGCAGCGTCGAATGGGTTATCTATTGGCAAGCATCAACG
ATGTCGTGTTCCTTTTTCATCGGCGTATGTTTTAGGCACATTCCACGCTC
GAGTATTGACGTACTGATAGTTGAATGATGAAAATGTTATGTGTAAGTTT
GATCAGACAATCATTAATTATTTATCAATACACATAACATTTTCAATACA
CTAATGTTATAATTTTCCAATATCACATCACTTACCAACGATGAATATGA
TGAGGTGTTTGCGGAACCAAATGTCTGTTTTTTAGTTTCCATCCCGTCCT
GCATGGCTCATAGTGAGTTGCAGGTCCCGGACTATAGAGTCATCCTACGG
TAAGGGGGAGGGCTCAAGTGTTTAACGAAGGCCGCTTCGCAAAAGCGGTG
CAAAATAACGCGAAACAAAACCATATCAATTGCATGTGTTTGTGCACCCC
TAAAGGTGGACACTTCATGGATTGAAAATGAACTTCTGTTCAAGGTGGGG
GCAACAAATACAAAAACAACGAATAAAGAAATGCAAAAATGCCCGATCCC
TGCTCAAAGCGGCTCCTTCGTTAAACAAAGCGTCTCAACCCCCCCCCCCC
TACCGTAGGATGACTCTAGTCCATCTGCACAAACGTCTCGCTACAAAATA
AAAACTTTTTCATGATCCGTCAGATTCTCTAAAACTTGCGTAACTTGCAA
AATTTTGAAGAGAAAGTAGAATTTCGTTTTGTAGTAAGACATGGATTTAG
GTGGACTGAAGTTCGGGACCTGGAGTTCATTATGAGCCATTCAGGACCAA
ATGGATTTTCTTCAATCATATATTTGTTTTGCGAACACTATTGAGAAATT
TTGTCTCCGAATTCACAGCTCTACAATGTTCCTATCTCTTCCTGGCCTAC
CCGCTTCTCAATGTTGTTGATGTTGTGTCGATTGTTCTCACCTTGTATAA
AACATTTTATAATATACGCTGCCCACACAAGACATCCTGCAGCACTGCAT
GCAGCATTTATGGGTAGGAAAAATACGTCGGTTCAGGAGGCGGTCGGTGT
ATATTGGCCCAACAGAACTCAGGGCATGGCAGTACTTGATACGCATTGGT
CACAAAATAGGTCATCTCACACAAAATATAATATATAGTGCTTGGCATAC
TAGACTGTTGGCAGCAGTGCGGAATACGTCTTTTTTGTACAATATTTCGA
CCTGAAACATGCTCAACATTTATTTTGGCTGTACAACACAGGAGTCATCG
TTTTACGCAATAGTTATGGATCAATCATCACGTTGGGTATAAATGGCGCA
ACACATGTTGGACGTACGTATATATTGAACAGCAATATGTGTTGCGGATT
CAATACATGGAGCTCCAGTAGTGTGAAGCCCTTGTCAATTGGTGCATATT
TACGGAACAGGCTGCCACCTGCACGTGATATACTCTCTATAATGGCTTTA
CCCCATATTTACTCCAAATGGTCGAATATGCTTTGATCACTTCACCCCCG
ACGATTACACACAACACGTGTTGTTTGCACAATATGTCGCCCCTAAATGG
GTGCAACAAATATCGACTGCACAATACACCCCGCTCTTTTGAATTAAAAT
ATTTCGAGTTATTCAATAGATCCACGTACACGGTGGCAATATATTGAATG
CAATATGTGAGCGTCTGTAAACATTATCGCGACTACGTAATGTCTTTATT
TTGTATTTTCCGAGGTGTGTATTTGTTGTACTGCAGTACGGTGTACGTAA
AGTGTATCTTTCGGCTGTGTCGTTTACGAGGAGAAAATTGATTGATTTAT
TCTCGAACCTTGCAGGTAGCCTCATTCGTTCATTGATTCGTTCATTAATA
CAGGTGCAGGTGCCAGACTATATGGTCGGGGTGATCCTGGGTAAATCTGG
CGCCACGGTGATAGAACTGCAAAACCACTCTGGAGCGCGCATCCAAGTCA
GCCAGCGGGGCGAGTACGTCCCCGGGACACACAACAGGTAGTCGTTGGGG
CTAGGTGCGGGGGCAGGAAGGGTGGGTCCCGTGGTAGTTTACGATGAATA
CAAGACACGAACGAAGACGAGAGATCTGGAATGAATACAGTATCTGTTTG
AGTTGGAGAGGATGCCCATGTGACGCGACTAGTATGCAAGTGTACTCGAA
ACACCATGGAGCATCGAAAAGCTCGGGCAGATCGACTATTCCATCTGTAC
ACTGCCACCCGGAAAATAAACAGGACCTGCATATGTGACTGTTCGCCGGG
TATATTACCACCTGGTGACAATCTGTAGAGTGACTGTTCATAGACCTGTG
AACGAATAAATATTTTTTTACCCAGGACAAATAATGATAGTTCGAGATAG
CTGTGAATGCCCCATTCGTATTTGCCTGGGGGGTGAAATGTTTTGAACAT
GGTCATTTTTCGCTGCGCTTTTGAAAACTTGACTCAGTCCTTCCTCACCG
TGGCTTACAAAATTGAACTCAACTTAAACTGTGTTGTAAGGGAAGAAGGC
TTGAACACTGGGATAATGATACGTTTTGGGTATTTTGAACCCGGCAAACC
ATTCGCTCGAAACCTTGCGCTGTATTTCACGGCATTCATAACGATAGGGA
GCTAGCTGTAAGGAGAAGGGTACGTAGGTTTGTGACAGTCGACATACAAA
TCCTGGAACAACCTTCCCAACAACCGTTTGGATTACTCACGGATGCGTTA
CGTGCGACACTTGTTCCTGCCAAGTTCCATGCGTGCTGCAGTTGTAGGAG
AGTACTGTGAGTCTGCCGCAACCCTCTCCCCCACCCTATTTGCGTACATT
TACTCAATTTGATGAAAAGTAAATGGGTATGACAAATATTACACACAACC
CCCTCCTCATGTCACCCTAATTTTGCCGGCTGTGGAATCAGTCACTCAGC
ATTACAAAATTCCCGAGCATGCCTTCAGTTCGAATGAATTGTTATGGCTA
TGTTTTGTGCTGTACTACTTGTACATGTCTCAAACCGAGTACCCCATGTT
TTGTTGATATTGTCTTGTTTTTGAAGTCCCCCCCCCCCTCCTCTCATTAC
CATTCTCATTGGTTTCTCTTGTCTCCCGGTAGAGCCGTGACAATTTCGGG
CACACAACAAGCTGTGCACCACGCGCAGATGATGCTCCACAACTTGTGCA
CGCAAGCCGCGCAGTTTGAACAGCGTCAGGCGCAGGGGATGATGTATCCG
CAGCAGCCCCCGTTCTACTGATAACGCGACACCGAAGAAAACGTCGGCCA
GGTGCTGACTGATCGGTGCCAAGTTGAAACTGAGGGAAAAGAGGTGGGAG
TCGTTACCGCAGTCGAAAATACTCTCAAACTTGGCAGGAATGCAGTGTAC
GACAC
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Coding sequence (CDS) from alignment at H-paniculata_contig2608:6962..14066-

>mRNA_H-paniculata_contig2608.7122.1 ID=mRNA_H-paniculata_contig2608.7122.1|Name=mRNA_H-paniculata_contig2608.7122.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1566bp|location=Sequence derived from alignment at H-paniculata_contig2608:6962..14066- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCGGCCTTGGCGGGTCGGGGCTCGGGGGCATGGTAGGAGGGCCCGG
GGTACCAGATGAGCGGCCTTGGCGGGTCGGGGCTCGGGGGCATGGTAGGA
GGGCCCGGGGTACCAGGTTGGCCAGTGGCCCACGGACACACCAACACCTG
GGGAGGCGTGCCGGAAGTTGAGACTGGCCCATCCAATAGCAATTCAAGAC
ACGGGCAAGCGAAGGGCAGTGGCGCAAATTGCGGGGCCGCAGCCGGCGGA
GGCAGCGGTAGCGGAGCGGGGGGTGGTGGAGCGAATGCAATGGGAATGGC
AGCACAACAGCAACAGCTCCAGCACCAGCAAGGCATGATGGCCCCTGGAA
GCATGGTGTACCCGGGCTACCATCCGTATTCTGGTTGGCCAGTGGCCCAC
GGACACACCAACACCTGGGGAGGCGTGCCGGAAGTTGAGACTGGCCCATC
CAATAGCAATTCAAGACACGGGCAAGCGAAGGGCAGTGGCGCAAATTGCG
GGGCCGCAGCCGGCGGAGGCAGCGGTAGCGGAGCGGGGGGTGGTGGAGCG
AATGCAATGGGAATGGCAGCACAACAGCAACAGCTCCAGCACCAGCAAGG
CATGATGGCCCCTGGAAGCATGGTGTACCCGGGCTACCATCCGTATTCTG
TGTCTCCGATGCAGCACCAACGTGGGTACGGAGATTTGCCATACCCTCAT
GGTGCCTTGACAGGAATGCCTTCTATGTTTCCTTTTACTCCGGAGATACC
CATTATGTGTCTCCGATGCAGCACCAACGTGGGTACGGAGATTTGCCATA
CCCTCATGGTGCCTTGACAGGAATGCCTTCTATGTTTCCTTTTACTCCGG
AGATACCCATTATGGCGACGGGCTCACACCAAGGCCAGCTGTCTGAACAT
GGCTACGCTGATGTTAGTGGAGATGTGCTTGCACAGACGCAGGCGACGGG
CTCACACCAAGGCCAGCTGTCTGAACATGGCTACGCTGATGTTAGTGGAG
ATGTGCTTGCACAGACGCAGGTGCAGGTGCCAGACTATATGGTCGGGGTG
ATCCTGGGTAAATCTGGCGCCACGGTGATAGAACTGCAAAACCACTCTGG
AGCGCGCATCCAAGTCAGCCAGCGGGGCGAGTACGTCCCCGGGACACACA
ACAGGTGCAGGTGCCAGACTATATGGTCGGGGTGATCCTGGGTAAATCTG
GCGCCACGGTGATAGAACTGCAAAACCACTCTGGAGCGCGCATCCAAGTC
AGCCAGCGGGGCGAGTACGTCCCCGGGACACACAACAGAGCCGTGACAAT
TTCGGGCACACAACAAGCTGTGCACCACGCGCAGATGATGCTCCACAACT
TGTGCACGCAAGCCGCGCAGTTTGAACAGCGTCAGGCGCAGGGGATGATG
TATCCGCAGCAGCCCCCGTTCTACTGAAGCCGTGACAATTTCGGGCACAC
AACAAGCTGTGCACCACGCGCAGATGATGCTCCACAACTTGTGCACGCAA
GCCGCGCAGTTTGAACAGCGTCAGGCGCAGGGGATGATGTATCCGCAGCA
GCCCCCGTTCTACTGA
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