mRNA_H-paniculata_contig26062.7117.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26062.7117.1 vs. uniprot
Match: D8LF80_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF80_ECTSI) HSP 1 Score: 133 bits (335), Expect = 1.650e-32 Identity = 75/127 (59.06%), Postives = 91/127 (71.65%), Query Frame = 1
Query: 1 QMTATAFLRQFADEMEMTTASTASLLVVVFWLVITVGRLISLRDQRTLTLARLYRHLTIVAALGAVTMLILLIAFWKDLVLWFTVLTFGLFNGPTLGYCYDLSTRVSPNPSTSTAVAMFGLTLGDSL 381
++ ATAFLRQFAD AS +LL+V WL IT+GR++ LRDQ TLTLARLYRH ++ GA M +LL++ +LW TVL FGLFNGP LGY YDLSTRVSPNP+TS+ VA FG+T G L
Sbjct: 273 RIAATAFLRQFADNTS--DASRRTLLIVCLWLAITLGRVLGLRDQLTLTLARLYRHAAVLCLGGAGAMFVLLVSSRSTAMLWVTVLAFGLFNGPVLGYGYDLSTRVSPNPATSSTVAEFGITAGARL 397
BLAST of mRNA_H-paniculata_contig26062.7117.1 vs. uniprot
Match: D7FZ10_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ10_ECTSI) HSP 1 Score: 122 bits (306), Expect = 4.790e-28 Identity = 70/166 (42.17%), Postives = 98/166 (59.04%), Query Frame = 1
Query: 10 ATAFLRQFADEMEMTTASTASLLVVVFWLVITVGRLISLRDQRTLTLARLYRHLTIVAALGAVTMLILLIAFWKDLVLWFTVLTFGLFNGPTLGYCYDLSTRVSPNPSTSTAVAMFGLTLGDSLVPFLASSFWWVTGGAFFLPVFLVASHAIPWFLVRETVQMHAA 507
ATA+L + D+ ++ S A LL+VV W IT+GRL L+DQR LTL RLYRH TI+ GA +L+ VLW + +GL+NGPT+GYCYDL+ RV+ +V MFGL G S+VP++ S W T L V ++ SH +P+ L+ ++ A
Sbjct: 288 ATAYLESYVDDTDVIDESHAELLIVVLWTAITIGRLAGLQDQRHLTLPRLYRHSTILFLCGAAAAAAILVFQSSAFVLWTGIAAYGLYNGPTVGYCYDLNNRVTMPSEMGMSVVMFGLNFGASIVPYVISWVWDYTDWPETLIVIIMLSHLLPYPLMLNAKRIDEA 453
BLAST of mRNA_H-paniculata_contig26062.7117.1 vs. uniprot
Match: D7G4N2_ECTSI (Similar to sodium-dependent glucose transporter 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4N2_ECTSI) HSP 1 Score: 109 bits (273), Expect = 1.070e-23 Identity = 62/154 (40.26%), Postives = 91/154 (59.09%), Query Frame = 1
Query: 10 ATAFLRQFADEMEMTTASTASLLVVVFWLVITVGRLISLRDQRTLTLARLYRHLTIVAALGAVTMLILLIAFWKDLVLWFTVLTFGLFNGPTLGYCYDLSTRVSPNPSTSTAVAMFGLTLGDSLVPFLASSFWWVTGGAFFLPVFLVASHAIPW 471
A +L+++ DE E+ S A LLVVV W+ I +GRL ++DQR LTL+RLYRH TI+ G +L+ VLW + +GL +GPT+GYCYDL+ R++ T+VAM G G S+ P++ S W T L + ++ SH +P+
Sbjct: 234 AAGYLKRYVDETEVIGESHAELLVVVLWMAIIIGRLAGIQDQRHLTLSRLYRHSTILFLGGTTAATAILVFQNSAFVLWTGIAAYGLCDGPTVGYCYDLNNRMATPSEMGTSVAMLGQNFGASIAPYVISWVWDYTDWPQILILVILLSHLLPY 387
BLAST of mRNA_H-paniculata_contig26062.7117.1 vs. uniprot
Match: A0A7S2UZ78_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ78_9STRA) HSP 1 Score: 108 bits (269), Expect = 6.770e-23 Identity = 64/156 (41.03%), Postives = 90/156 (57.69%), Query Frame = 1
Query: 1 QMTATAFLRQFADEMEMTTASTASLLVVVFWLVITVGRLISLRDQRTLTLARLYRHLTIVAALGAVTMLILLIAFWKDLVLWFTVLTFGLFNGPTLGYCYDLSTRVSPNPSTSTAVAMFGLTLGDSLVPFLASSFWWVTGGAFFLPVFLVASHAIP 468
++TATA+ +F + + +LL++V W+ IT GR+ ++DQR L RLY HL + GA+ ML+LL LVLW V +G FNGPT+GYCYDL+ R++ ++ M GL G SLVP+ +S W G F L L+ SH IP
Sbjct: 276 KVTATAYFTEFIQDTRILPFEDCALLIMVLWVAITFGRIAGIQDQRFLNRPRLYNHLCLFCLAGAIAMLLLLAFPSSRLVLWVGVGLYGFFNGPTVGYCYDLNNRLTVPSEVGMSIVMLGLNSGTSLVPY-GTSLVWEYLGPFTLMWALLVSHLIP 430
BLAST of mRNA_H-paniculata_contig26062.7117.1 vs. uniprot
Match: A0A836CPE2_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPE2_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.220e-22 Identity = 60/164 (36.59%), Postives = 91/164 (55.49%), Query Frame = 1
Query: 10 ATAFLRQFADEMEMTTASTASLLVVVFWLVITVGRLISLRDQRTLTLARLYRHLTIVAALGAVTMLILLIAFWKDLVLWFTVLTFGLFNGPTLGYCYDLSTRVSPNPSTSTAVAMFGLTLGDSLVPFLASSFWWVTGGAFFLPVFLVASHAIPWFLVRETVQMH 501
ATA+L Q+ + + + A LL+ V WL ITVGR++ ++ QRT+TL++L++ + GA + L+ LW V +G NGP +GYCYDL+ R++ T ++ MFGL G S +PF S W T L VFLV SH +P+ + ++H
Sbjct: 274 ATAYLTQYVADTGIIPDARAPLLIAVLWLAITVGRILGIQAQRTITLSKLHKQCAGLFIGGAAAAALPLVLLHSAAALWIAVALYGTLNGPCVGYCYDLNNRITFPSETGMSIVMFGLNCGSSFIPFAISGLWDATQWPSILFVFLVVSHLLPFPALLTARRLH 437
BLAST of mRNA_H-paniculata_contig26062.7117.1 vs. uniprot
Match: A0A7S3UYE2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYE2_HETAK) HSP 1 Score: 97.8 bits (242), Expect = 2.740e-20 Identity = 58/156 (37.18%), Postives = 89/156 (57.05%), Query Frame = 1
Query: 1 QMTATAFLRQFADEMEMTTASTASLLVVVFWLVITVGRLISLRDQRTLTLARLYRHLTIVAALGAVTMLILLIAFWKDLVLWFTVLTFGLFNGPTLGYCYDLSTRVSPNPSTSTAVAMFGLTLGDSLVPFLASSFWWVTGGAFFLPVFLVASHAIP 468
++T+TA+ +F +E ++ A+LL+ V W IT+GR+ ++D R L L++LY HL I G + M ++ + L LW V +G FNGPT+GY YDL+ R + ++ M GL G SLVP+ S W TG A+ L ++ SH +P
Sbjct: 76 KVTSTAYFTEFVEETDLIPYDDATLLICVLWTAITLGRVAGIQDMRFLDLSKLYNHLLIFLVGGIIGMGMIALFPSLPLALWVGVGLYGFFNGPTVGYIYDLNNRATVPSELGMSIVMLGLNCGASLVPYGTSLLWEYTG-AYSLIYIIMFSHIVP 230
BLAST of mRNA_H-paniculata_contig26062.7117.1 vs. uniprot
Match: A0A7S3UWT4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWT4_HETAK) HSP 1 Score: 97.8 bits (242), Expect = 2.830e-19 Identity = 58/156 (37.18%), Postives = 89/156 (57.05%), Query Frame = 1
Query: 1 QMTATAFLRQFADEMEMTTASTASLLVVVFWLVITVGRLISLRDQRTLTLARLYRHLTIVAALGAVTMLILLIAFWKDLVLWFTVLTFGLFNGPTLGYCYDLSTRVSPNPSTSTAVAMFGLTLGDSLVPFLASSFWWVTGGAFFLPVFLVASHAIP 468
++T+TA+ +F +E ++ A+LL+ V W IT+GR+ ++D R L L++LY HL I G + M ++ + L LW V +G FNGPT+GY YDL+ R + ++ M GL G SLVP+ S W TG A+ L ++ SH +P
Sbjct: 289 KVTSTAYFTEFVEETDLIPYDDATLLICVLWTAITLGRVAGIQDMRFLDLSKLYNHLLIFLVGGIIGMGMIALFPSLPLALWVGVGLYGFFNGPTVGYIYDLNNRATVPSELGMSIVMLGLNCGASLVPYGTSLLWEYTG-AYSLIYIIMFSHIVP 443
BLAST of mRNA_H-paniculata_contig26062.7117.1 vs. uniprot
Match: A0A835ZG03_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG03_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.290e-18 Identity = 60/162 (37.04%), Postives = 85/162 (52.47%), Query Frame = 1
Query: 10 ATAFLRQFADEMEMTTASTASLLVVVFWLVITVGRLISLRDQRTLTLARLYRHLTIVAALGAVTMLILLIAFWKDLVLWFTVLTFGLFNGPTLGYCYDLSTRVSPNPSTSTAVAMFGLTLGDSLVPFLASSFWWVTGGAF---------FLPVFLVASHAIP 468
ATA+L Q+ ++ + + ASLL+VV W IT+GR + + QR T LY T++ GA + L+ VLW V +GLFNGP++GYCYDL+ R + +V MFGL G SLVP+ ++ W A L F + SHA+P
Sbjct: 242 ATAYLTQYVEDTGVIAPACASLLIVVLWAAITLGRCVGIHLQRDATPRALYAQTTLLCVAGAAAAALPLLFPSSAAVLWIAVALWGLFNGPSIGYCYDLNNRATAPSEVGMSVVMFGLNSGASLVPYALAAAWRGAAAAAGXXXXXXXRALFAFALVSHALP 403
BLAST of mRNA_H-paniculata_contig26062.7117.1 vs. uniprot
Match: A0A7S3XQ09_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ09_HETAK) HSP 1 Score: 73.6 bits (179), Expect = 5.500e-11 Identity = 57/165 (34.55%), Postives = 84/165 (50.91%), Query Frame = 1
Query: 1 QMTATAFLRQFADEMEMTTASTASLLVVVFWLVITVGRLISLRDQRTL-TLARLYRHLTIVAALGAVTMLILLIAFWKDLVLWFTVLTFGLFNGPTLGYCYDLSTRVSPNPSTSTAVAMFGLTLGDSLVPFLASSFWWVTGGAF---FLPVFLVASHAIPWFLVR 483
++T+TA+ + E + S L+++ W IT GR ++ QR ++A L + GA M ++ A LW V +GLFNGPT+G+ YDL+ R++ S T+V M GL G SLVP+ S+ W GA L + L ASH P L+R
Sbjct: 323 KVTSTAYFTNYVLETKAIKESQVHFLLMLLWGGITAGRFAGIQQQRKFDSVASLGKTFRFNLMAGAAAMALIGGAPRCAAALWAGVGLYGLFNGPTVGFAYDLNNRLTVATSLGTSVVMLGLNTGASLVPYATSALWHRFPGALGPRALLLVLAASHLAPLALLR 487 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26062.7117.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26062.7117.1 >prot_H-paniculata_contig26062.7117.1 ID=prot_H-paniculata_contig26062.7117.1|Name=mRNA_H-paniculata_contig26062.7117.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=260bp MTATAFLRQFADEMEMTTASTASLLVVVFWLVITVGRLISLRDQRTLTLAback to top mRNA from alignment at H-paniculata_contig26062:191..1077+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26062.7117.1 ID=mRNA_H-paniculata_contig26062.7117.1|Name=mRNA_H-paniculata_contig26062.7117.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=887bp|location=Sequence derived from alignment at H-paniculata_contig26062:191..1077+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26062:191..1077+ >mRNA_H-paniculata_contig26062.7117.1 ID=mRNA_H-paniculata_contig26062.7117.1|Name=mRNA_H-paniculata_contig26062.7117.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1560bp|location=Sequence derived from alignment at H-paniculata_contig26062:191..1077+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |