prot_H-paniculata_contig26031.7106.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26031.7106.1
Unique Nameprot_H-paniculata_contig26031.7106.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length208
Homology
BLAST of mRNA_H-paniculata_contig26031.7106.1 vs. uniprot
Match: A0A6H5KNI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI2_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 9.180e-58
Identity = 104/182 (57.14%), Postives = 131/182 (71.98%), Query Frame = 0
Query:    1 MRWTGGLRMISVVIEDARGGQGLPGIGMTEGPAKLVLEALGAKVTIASPPEMDNKDGFAAACS-TPGVNSVRHLREHLLKLSGHLEEHERRGDDGLKWVDNLHEKRLVLRQVGEILNECDWRFSPALGGSWIAVFHHPKVGRNPNVWRTGSATPTIEFRVLMRGARLDKANGVTAVEDAAYA 181
            MRW GGL M++ VI+DA GG+ +P I +T+ P+ + +EALG KV IA+PPE  N DGF+AAC    GVNS+R LR H+  L GH++EH R GD+GL+WVDNL +KR VLRQVG IL + ++R+ PALGG W+ V H P      +VW TGSATPTIE+RVLMR ARL    G+T  EDA YA
Sbjct: 2821 MRWDGGLVMVTAVIKDAVGGKAIPHIDLTQSPSGMTIEALGVKVRIAAPPEAKNMDGFSAACGGAVGVNSMRRLRGHVQNLDGHIDEHARGGDEGLRWVDNLKQKRTVLRQVGAILED-EFRYLPALGGLWMRVRHLPSAKTASDVWNTGSATPTIEYRVLMRRARLADEGGLTVEEDAGYA 3001          
BLAST of mRNA_H-paniculata_contig26031.7106.1 vs. uniprot
Match: D7FWI3_ECTSI (Global transcription factor group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI3_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 2.290e-57
Identity = 101/182 (55.49%), Postives = 131/182 (71.98%), Query Frame = 0
Query:    1 MRWTGGLRMISVVIEDARGGQGLPGIGMTEGPAKLVLEALGAKVTIASPPEMDNKDGFAAACS-TPGVNSVRHLREHLLKLSGHLEEHERRGDDGLKWVDNLHEKRLVLRQVGEILNECDWRFSPALGGSWIAVFHHPKVGRNPNVWRTGSATPTIEFRVLMRGARLDKANGVTAVEDAAYA 181
            M+W GGL M++ V++DA+GG+ +P I +T+ P+ + +EALG K+ IA+PPE  N DGF+AAC    GVNS+R LR  L KL GH++EH R GD+GL+WVDNL++KR VLRQVG IL + ++R+ PALGG W+ V H P       VW TGSATPTIEFRVLMR A L    G+T  ED+ YA
Sbjct: 2095 MQWDGGLVMVTAVVKDAKGGKAIPDIDLTQSPSGMTMEALGVKIRIAAPPEAKNNDGFSAACGGAVGVNSMRRLRGQLQKLDGHIDEHARGGDEGLRWVDNLNQKRTVLRQVGAILED-EFRYLPALGGLWMRVRHLPSAKSGSGVWNTGSATPTIEFRVLMRRALLADEGGLTVEEDSGYA 2275          
BLAST of mRNA_H-paniculata_contig26031.7106.1 vs. uniprot
Match: D8LBS6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS6_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 6.030e-42
Identity = 79/182 (43.41%), Postives = 106/182 (58.24%), Query Frame = 0
Query:    1 MRWTGGLRMISVVIEDARGGQGLPGIGMTEGPAKLVLEALGAKVTIASPPEMDNKDGFAAACSTP-GVNSVRHLREHLLKLSGHLEEHERRGDDGLKWVDNLHEKRLVLRQVGEILNECDWRFSPALGGSWIAVFHHPKVGRNPNVWRTGSATPTIEFRVLMRGARLDKANGVTAVEDAAYA 181
            M W GGL M+S ++EDA G  GLPG+  T    KL +EAL  K+ I +P +  N+ GF A C    GVN ++ L  HL +L+ H++ + R   D L+WVDNL +KR VLRQ   IL E D+ F+PALGG W+   H P        W TG ATP+I+  VLM   RL   +G+   ++  YA
Sbjct:   10 MWWDGGLVMVSAIVEDAAGVTGLPGVTFTHSRWKLTIEALETKIDITAPADAKNQAGFVAGCGGDVGVNRIKRLGHHLQRLNDHIDPNARGSYDSLRWVDNLEQKRTVLRQTDGILGEGDFVFNPALGGIWMRFRHCPSTMNGSGEWNTGFATPSIKLHVLMFRERLANTDGLVVEQNHEYA 191          
BLAST of mRNA_H-paniculata_contig26031.7106.1 vs. uniprot
Match: A0A6H5JFX2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFX2_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 1.280e-26
Identity = 67/181 (37.02%), Postives = 91/181 (50.28%), Query Frame = 0
Query:    1 MRWTGGLRMISVVIEDARGGQGLPGIGMTEGPAKLVLEALGAKVTIASPPEMDNKDGFAAACSTPGVNSVRHLREHLLKLSGHLEEHERRGDDGLKWVDNLHEKRLVLRQVGEILNECDWRFSPALGGSWIAVFHHPKVGRNPNVWRTGSATPTIEFRVLMRGARLDKANGVTAVEDAAYA 181
            M W G L M++ ++EDA G  GLPG+  T GP KL +EAL  ++T                     +  +R  +  L  ++G +        D L+WVDNL +KR VLRQ+ +IL   D+ F+PALGG W+   H P        W TG ATPTI+  VLM   RL    G+   E+  YA
Sbjct:   21 MWWDGDLVMVTAIVEDAAGVTGLPGVTFTHGPWKLTIEALKTRLT-------------------SQLQRMRRTKMDLSLVAGGML-------DSLRWVDNLEQKRDVLRQMDDILEGGDFIFNPALGGIWMKFRHCPSTMIGSGEWNTGFATPTIKLHVLMCRERLANTGGLVVQENHEYA 175          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26031.7106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KNI2_9PHAE9.180e-5857.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWI3_ECTSI2.290e-5755.49Global transcription factor group n=1 Tax=Ectocarp... [more]
D8LBS6_ECTSI6.030e-4243.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFX2_9PHAE1.280e-2637.02Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26031contigH-paniculata_contig26031:1365..1988 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26031.7106.1mRNA_H-paniculata_contig26031.7106.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26031 1344..1988 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26031.7106.1 ID=prot_H-paniculata_contig26031.7106.1|Name=mRNA_H-paniculata_contig26031.7106.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=208bp
MRWTGGLRMISVVIEDARGGQGLPGIGMTEGPAKLVLEALGAKVTIASPP
EMDNKDGFAAACSTPGVNSVRHLREHLLKLSGHLEEHERRGDDGLKWVDN
LHEKRLVLRQVGEILNECDWRFSPALGGSWIAVFHHPKVGRNPNVWRTGS
ATPTIEFRVLMRGARLDKANGVTAVEDAAYAARASEARVQAEAEAEATAG
GAEDGEDE
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