prot_H-paniculata_contig25964.7080.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig25964.7080.1
Unique Name	prot_H-paniculata_contig25964.7080.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	195

Homology

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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: D7FTL9_ECTSI (Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL9_ECTSI)

HSP 1 Score: 371 bits (952), Expect = 3.680e-118
Identity = 171/187 (91.44%), Postives = 180/187 (96.26%), Query Frame = 0

Query:    8 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 194
            GTIKD+VTRYAHQSGH+VSRRAGWDCHGLPVEYEIDQSL I HRDQV+EMGI+TYN+HCRSIVTRYS+EWE TIKRLGRWIDFENDYKTMDPWFMESVWWVFK+L EK LVYRGYKVMPFSTACATPLSNFEAGLNYKDV DPAVVV+FPLK+DPEVSLLAWTTTPWTLPSNLALCVNK FDYVKLR
Sbjct:   74 GTIKDAVTRYAHQSGHHVSRRAGWDCHGLPVEYEIDQSLGIKHRDQVLEMGIETYNKHCRSIVTRYSKEWERTIKRLGRWIDFENDYKTMDPWFMESVWWVFKSLVEKNLVYRGYKVMPFSTACATPLSNFEAGLNYKDVQDPAVVVAFPLKDDPEVSLLAWTTTPWTLPSNLALCVNKAFDYVKLR 260

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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A812UNE2_SYMMI (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UNE2_SYMMI)

HSP 1 Score: 329 bits (843), Expect = 7.480e-112
Identity = 148/187 (79.14%), Postives = 169/187 (90.37%), Query Frame = 0

Query:    8 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 194
            GTIKD+VTRYAHQ+GH+VSRR GWDCHGLP+EYEID++L IT R+QV+EMG+ TYN  CR+IV RY++EWE T+ RLGRWIDF+NDYKTMD  FMESVWWVFK L +KGLVYRGYKVMP+STACATPLSNFEAG NYKDVSDPA VVSFPL+NDP VSL+AWTTTPWTLPSNLALCVN  F+YVK++
Sbjct:   65 GTIKDTVTRYAHQTGHFVSRRFGWDCHGLPIEYEIDKTLGITDRNQVLEMGVGTYNDACRAIVQRYTKEWEKTVTRLGRWIDFKNDYKTMDKDFMESVWWVFKCLFDKGLVYRGYKVMPYSTACATPLSNFEAGQNYKDVSDPACVVSFPLENDPSVSLVAWTTTPWTLPSNLALCVNPTFEYVKIK 251

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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A7S2XPF3_9STRA (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPF3_9STRA)

HSP 1 Score: 323 bits (827), Expect = 8.060e-107
Identity = 149/187 (79.68%), Postives = 162/187 (86.63%), Query Frame = 0

Query:    8 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 194
            GTIKD VTRYA  SG  V RRAGWDCHGLPVEYEIDQ L ITHRDQV+EMGI  YN  CRSIVTRY++EWE T+ RLGRWIDFENDYKTMDP FMESVWWVF  L EKGLVY+GYKVMPFSTACATPLSNFEAGLNYKDV DPAVVVSFPL +DPEVS +AWTTTPWTLPSNL+LCV+   +Y+ ++
Sbjct:   63 GTIKDVVTRYAAMSGKQVERRAGWDCHGLPVEYEIDQKLNITHRDQVLEMGIDKYNATCRSIVTRYTKEWESTVTRLGRWIDFENDYKTMDPNFMESVWWVFSQLFEKGLVYQGYKVMPFSTACATPLSNFEAGLNYKDVRDPAVVVSFPLVDDPEVSFVAWTTTPWTLPSNLSLCVHPKLEYIHIQ 249

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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A7S2WSX5_9STRA (Isoleucine--tRNA ligase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSX5_9STRA)

HSP 1 Score: 334 bits (856), Expect = 2.090e-104
Identity = 150/187 (80.21%), Postives = 169/187 (90.37%), Query Frame = 0

Query:    8 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 194
            GTIKD+VTRYA Q+GH+V RR GWDCHGLPVE+EID++L IT+RDQV EMGI  YN  CRSIV+RY++EWE T+KRLGRWIDFENDYKTM+PWFMESVWWVFK L  KGLVY+GYKVMP+STAC TPLSNFEAGLNYK+V DPAVVVSFPL+ DP VSLLAWTTTPWTLPSNLALCVN +FDYVK++
Sbjct:   72 GTIKDTVTRYASQTGHFVERRFGWDCHGLPVEFEIDKTLGITNRDQVFEMGIDKYNAECRSIVSRYTKEWESTVKRLGRWIDFENDYKTMNPWFMESVWWVFKQLFAKGLVYQGYKVMPYSTACGTPLSNFEAGLNYKEVEDPAVVVSFPLEEDPSVSLLAWTTTPWTLPSNLALCVNVEFDYVKIQ 258

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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A482S0Q8_9ARCH (Isoleucine--tRNA ligase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0Q8_9ARCH)

HSP 1 Score: 332 bits (850), Expect = 6.450e-104
Identity = 151/187 (80.75%), Postives = 164/187 (87.70%), Query Frame = 0

Query:    8 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 194
            GTIKD+VTRYAHQ+GHYVSRR GWDCHGLPVEYEID+ L IT R  V+EMG+  YN  CR IV RY+ EWE T+ RLGRWIDF+NDYKTMDP FMESVWWVFKT+ EKGLVYRGYKVMP+ST C TPLSNFEAGLNYK+V+DPA VVSFPL NDPEVSLLAWTTTPWTLPSNLALCVN  FDYVK+R
Sbjct:    4 GTIKDTVTRYAHQTGHYVSRRFGWDCHGLPVEYEIDKKLNITGRAMVLEMGVDKYNAECRGIVQRYTGEWEKTVTRLGRWIDFKNDYKTMDPQFMESVWWVFKTMFEKGLVYRGYKVMPYSTFCGTPLSNFEAGLNYKEVNDPAAVVSFPLVNDPEVSLLAWTTTPWTLPSNLALCVNPTFDYVKIR 190

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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: W7U130_9STRA (Isoleucine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U130_9STRA)

HSP 1 Score: 331 bits (849), Expect = 3.040e-103
Identity = 147/187 (78.61%), Postives = 164/187 (87.70%), Query Frame = 0

Query:    8 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 194
            GTIKD+VTR+AHQ GH+V RR GWDCHGLPVE+EIDQ L I  RDQV  MGI  YNQHCRSIVTRY++EWE T+ R+GRWIDF+NDYKT+DPWFMESVWWVF  LH+KGLVY+GYKVMPFSTAC TPLSNFEAGLNYKDV DPAV+VSFPL +DP  SLLAWTTTPWTLPSNLALCVN +  Y+K+R
Sbjct:   60 GTIKDTVTRFAHQKGHHVVRRFGWDCHGLPVEFEIDQELGIKDRDQVFAMGIAKYNQHCRSIVTRYTKEWERTVTRIGRWIDFKNDYKTLDPWFMESVWWVFSALHKKGLVYQGYKVMPFSTACGTPLSNFEAGLNYKDVQDPAVIVSFPLLSDPSTSLLAWTTTPWTLPSNLALCVNPEIRYIKVR 246

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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A7S3GN89_9STRA (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GN89_9STRA)

HSP 1 Score: 325 bits (832), Expect = 2.750e-102
Identity = 145/186 (77.96%), Postives = 165/186 (88.71%), Query Frame = 0

Query:    8 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKL 193
            GTIKD+VTR+AHQ+GH+VSRR GWDCHGLPVEYEIDQ L+IT R  V++MG+  YN  CR IVTRY+ EWE T+ RLGRWIDF+NDYKTMDP FMESVWWVF T+ +KGLVYRGYKVMP+ST C TPLSNFEAGLNYKDV+DPA VVSFPL++DP VSLLAWTTTPWTLPSNLALCVN+ F+YVK+
Sbjct:   74 GTIKDTVTRFAHQTGHHVSRRFGWDCHGLPVEYEIDQKLKITGRQMVLDMGVANYNAECRGIVTRYTAEWEKTVNRLGRWIDFKNDYKTMDPEFMESVWWVFDTMFKKGLVYRGYKVMPYSTYCGTPLSNFEAGLNYKDVNDPAAVVSFPLESDPNVSLLAWTTTPWTLPSNLALCVNEKFEYVKI 259

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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A7S3GDZ8_9EUKA (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GDZ8_9EUKA)

HSP 1 Score: 304 bits (779), Expect = 4.970e-102
Identity = 139/187 (74.33%), Postives = 157/187 (83.96%), Query Frame = 0

Query:    8 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 194
            GTIKD VTRYAHQ+GH+V RR GWDCHGLPVEYEIDQ L I   D V++MGI  YN  CRSIV RYS EW V ++RLGRWIDF+NDYKTM   FMESVWWVFK L +KGLVY+GYKVMP+S  CATPLSNFEA L+Y+DVSDPA+VV+FP+  D EVSLLAWTTTPWTLPSNLALCVN + DYVK++
Sbjct:   75 GTIKDIVTRYAHQTGHHVERRFGWDCHGLPVEYEIDQKLGIKSSDDVMKMGIDKYNAECRSIVMRYSTEWRVVVERLGRWIDFDNDYKTMHLSFMESVWWVFKQLFDKGLVYQGYKVMPYSMKCATPLSNFEANLDYRDVSDPAIVVNFPIIGDEEVSLLAWTTTPWTLPSNLALCVNPELDYVKVK 261

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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A7S3ZMQ5_9STRA (Isoleucine--tRNA ligase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMQ5_9STRA)

HSP 1 Score: 318 bits (816), Expect = 1.790e-101
Identity = 144/187 (77.01%), Postives = 165/187 (88.24%), Query Frame = 0

Query:    8 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 194
            GTIKD+VTRYAHQ+GH VSRR GWDCHGLPVEYEID++L +  R++V+ MGI  YN HCRSIV RY+REWE  + RLGRWIDFENDY+TMD  FMESVWWVFKTL +KGLVYRGYKVMP+ST CATPLSNFEAGLNYKDV+D AVVVSFPL+++P VSL+AWTTTPWTLPSNLALCVN   +YV++R
Sbjct:   73 GTIKDTVTRYAHQTGHKVSRRFGWDCHGLPVEYEIDKALGLNSREEVLAMGIGVYNSHCRSIVQRYTREWETVVTRLGRWIDFENDYRTMDLSFMESVWWVFKTLFDKGLVYRGYKVMPYSTTCATPLSNFEAGLNYKDVTDIAVVVSFPLRDEPNVSLVAWTTTPWTLPSNLALCVNAHLNYVQVR 259

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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A7S1XPX7_9STRA (Isoleucine--tRNA ligase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPX7_9STRA)

HSP 1 Score: 302 bits (774), Expect = 2.670e-101
Identity = 133/186 (71.51%), Postives = 157/186 (84.41%), Query Frame = 0

Query:    8 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKL 193
            GTIKD+VTRYAHQ+GHYV RR GWDCHGLPVE+EID+ L I  R+QV+EMGI+ YN  CRSIV RY+ EW   ++RLGRWIDF+NDYKTMD  FME++WWVF  LH++ LVY G+KVMP+ST C+TPLSNFEAG NYKDV DPAV VSFPL ++P V+ LAWTTTPWTLPSNLALCVN + +YVK+
Sbjct:   67 GTIKDTVTRYAHQTGHYVERRFGWDCHGLPVEHEIDKKLNIKTREQVLEMGIENYNNECRSIVQRYTGEWRTMVERLGRWIDFDNDYKTMDVTFMETIWWVFSELHKRNLVYYGFKVMPYSTGCSTPLSNFEAGQNYKDVKDPAVTVSFPLVDEPGVAFLAWTTTPWTLPSNLALCVNPELEYVKI 252

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FTL9_ECTSI	3.680e-118	91.44	Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A812UNE2_SYMMI	7.480e-112	79.14	Isoleucine--tRNA ligase (Fragment) n=1 Tax=Symbiod...	[more]
A0A7S2XPF3_9STRA	8.060e-107	79.68	Isoleucine--tRNA ligase (Fragment) n=1 Tax=Attheya...	[more]
A0A7S2WSX5_9STRA	2.090e-104	80.21	Isoleucine--tRNA ligase n=2 Tax=Rhizochromulina ma...	[more]
A0A482S0Q8_9ARCH	6.450e-104	80.75	Isoleucine--tRNA ligase n=1 Tax=archaeon TaxID=190...	[more]
W7U130_9STRA	3.040e-103	78.61	Isoleucine--tRNA ligase n=2 Tax=Monodopsidaceae Ta...	[more]
A0A7S3GN89_9STRA	2.750e-102	77.96	Isoleucine--tRNA ligase (Fragment) n=1 Tax=Spumell...	[more]
A0A7S3GDZ8_9EUKA	4.970e-102	74.33	Isoleucine--tRNA ligase (Fragment) n=1 Tax=Palpito...	[more]
A0A7S3ZMQ5_9STRA	1.790e-101	77.01	Isoleucine--tRNA ligase n=2 Tax=Pelagomonas calceo...	[more]
A0A7S1XPX7_9STRA	2.670e-101	71.51	Isoleucine--tRNA ligase n=1 Tax=Phaeomonas parva T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	GENE3D	3.90.740.10		coord: 153..194 e-value: 9.8E-11 score: 43.7
IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	SUPERFAMILY	50677	ValRS/IleRS/LeuRS editing domain	coord: 145..191
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 5..152 e-value: 3.2E-42 score: 146.7
IPR002300	Aminoacyl-tRNA synthetase, class Ia	PFAM	PF00133	tRNA-synt_1	coord: 8..192 e-value: 5.6E-72 score: 242.9
None	No IPR available	PANTHER	PTHR42780	FAMILY NOT NAMED	coord: 7..193
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 8..144

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig25964	contig	H-paniculata_contig25964:1824..3022 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig25964.7080.1	mRNA_H-paniculata_contig25964.7080.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig25964 1824..3022 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig25964.7080.1 ID=prot_H-paniculata_contig25964.7080.1|Name=mRNA_H-paniculata_contig25964.7080.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
MFIFFSPGTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITH
RDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPW
FMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDP
AVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009008	Val/Leu/Ile-tRNA-synth_edit
IPR014729	Rossmann-like_a/b/a_fold
IPR002300	aa-tRNA-synth_Ia