mRNA_H-paniculata_contig25964.7080.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig25964.7080.1
Unique NamemRNA_H-paniculata_contig25964.7080.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: D7FTL9_ECTSI (Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL9_ECTSI)

HSP 1 Score: 371 bits (952), Expect = 3.680e-118
Identity = 171/187 (91.44%), Postives = 180/187 (96.26%), Query Frame = 1 
Query:   22 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 582
            GTIKD+VTRYAHQSGH+VSRRAGWDCHGLPVEYEIDQSL I HRDQV+EMGI+TYN+HCRSIVTRYS+EWE TIKRLGRWIDFENDYKTMDPWFMESVWWVFK+L EK LVYRGYKVMPFSTACATPLSNFEAGLNYKDV DPAVVV+FPLK+DPEVSLLAWTTTPWTLPSNLALCVNK FDYVKLR
Sbjct:   74 GTIKDAVTRYAHQSGHHVSRRAGWDCHGLPVEYEIDQSLGIKHRDQVLEMGIETYNKHCRSIVTRYSKEWERTIKRLGRWIDFENDYKTMDPWFMESVWWVFKSLVEKNLVYRGYKVMPFSTACATPLSNFEAGLNYKDVQDPAVVVAFPLKDDPEVSLLAWTTTPWTLPSNLALCVNKAFDYVKLR 260
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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A812UNE2_SYMMI (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UNE2_SYMMI)

HSP 1 Score: 329 bits (843), Expect = 7.480e-112
Identity = 148/187 (79.14%), Postives = 169/187 (90.37%), Query Frame = 1 
Query:   22 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 582
            GTIKD+VTRYAHQ+GH+VSRR GWDCHGLP+EYEID++L IT R+QV+EMG+ TYN  CR+IV RY++EWE T+ RLGRWIDF+NDYKTMD  FMESVWWVFK L +KGLVYRGYKVMP+STACATPLSNFEAG NYKDVSDPA VVSFPL+NDP VSL+AWTTTPWTLPSNLALCVN  F+YVK++
Sbjct:   65 GTIKDTVTRYAHQTGHFVSRRFGWDCHGLPIEYEIDKTLGITDRNQVLEMGVGTYNDACRAIVQRYTKEWEKTVTRLGRWIDFKNDYKTMDKDFMESVWWVFKCLFDKGLVYRGYKVMPYSTACATPLSNFEAGQNYKDVSDPACVVSFPLENDPSVSLVAWTTTPWTLPSNLALCVNPTFEYVKIK 251
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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A7S2XPF3_9STRA (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPF3_9STRA)

HSP 1 Score: 323 bits (827), Expect = 8.060e-107
Identity = 149/187 (79.68%), Postives = 162/187 (86.63%), Query Frame = 1 
Query:   22 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 582
            GTIKD VTRYA  SG  V RRAGWDCHGLPVEYEIDQ L ITHRDQV+EMGI  YN  CRSIVTRY++EWE T+ RLGRWIDFENDYKTMDP FMESVWWVF  L EKGLVY+GYKVMPFSTACATPLSNFEAGLNYKDV DPAVVVSFPL +DPEVS +AWTTTPWTLPSNL+LCV+   +Y+ ++
Sbjct:   63 GTIKDVVTRYAAMSGKQVERRAGWDCHGLPVEYEIDQKLNITHRDQVLEMGIDKYNATCRSIVTRYTKEWESTVTRLGRWIDFENDYKTMDPNFMESVWWVFSQLFEKGLVYQGYKVMPFSTACATPLSNFEAGLNYKDVRDPAVVVSFPLVDDPEVSFVAWTTTPWTLPSNLSLCVHPKLEYIHIQ 249
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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A7S2WSX5_9STRA (Isoleucine--tRNA ligase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSX5_9STRA)

HSP 1 Score: 334 bits (856), Expect = 2.090e-104
Identity = 150/187 (80.21%), Postives = 169/187 (90.37%), Query Frame = 1 
Query:   22 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 582
            GTIKD+VTRYA Q+GH+V RR GWDCHGLPVE+EID++L IT+RDQV EMGI  YN  CRSIV+RY++EWE T+KRLGRWIDFENDYKTM+PWFMESVWWVFK L  KGLVY+GYKVMP+STAC TPLSNFEAGLNYK+V DPAVVVSFPL+ DP VSLLAWTTTPWTLPSNLALCVN +FDYVK++
Sbjct:   72 GTIKDTVTRYASQTGHFVERRFGWDCHGLPVEFEIDKTLGITNRDQVFEMGIDKYNAECRSIVSRYTKEWESTVKRLGRWIDFENDYKTMNPWFMESVWWVFKQLFAKGLVYQGYKVMPYSTACGTPLSNFEAGLNYKEVEDPAVVVSFPLEEDPSVSLLAWTTTPWTLPSNLALCVNVEFDYVKIQ 258
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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A482S0Q8_9ARCH (Isoleucine--tRNA ligase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S0Q8_9ARCH)

HSP 1 Score: 332 bits (850), Expect = 6.450e-104
Identity = 151/187 (80.75%), Postives = 164/187 (87.70%), Query Frame = 1 
Query:   22 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 582
            GTIKD+VTRYAHQ+GHYVSRR GWDCHGLPVEYEID+ L IT R  V+EMG+  YN  CR IV RY+ EWE T+ RLGRWIDF+NDYKTMDP FMESVWWVFKT+ EKGLVYRGYKVMP+ST C TPLSNFEAGLNYK+V+DPA VVSFPL NDPEVSLLAWTTTPWTLPSNLALCVN  FDYVK+R
Sbjct:    4 GTIKDTVTRYAHQTGHYVSRRFGWDCHGLPVEYEIDKKLNITGRAMVLEMGVDKYNAECRGIVQRYTGEWEKTVTRLGRWIDFKNDYKTMDPQFMESVWWVFKTMFEKGLVYRGYKVMPYSTFCGTPLSNFEAGLNYKEVNDPAAVVSFPLVNDPEVSLLAWTTTPWTLPSNLALCVNPTFDYVKIR 190
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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: W7U130_9STRA (Isoleucine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U130_9STRA)

HSP 1 Score: 331 bits (849), Expect = 3.040e-103
Identity = 147/187 (78.61%), Postives = 164/187 (87.70%), Query Frame = 1 
Query:   22 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 582
            GTIKD+VTR+AHQ GH+V RR GWDCHGLPVE+EIDQ L I  RDQV  MGI  YNQHCRSIVTRY++EWE T+ R+GRWIDF+NDYKT+DPWFMESVWWVF  LH+KGLVY+GYKVMPFSTAC TPLSNFEAGLNYKDV DPAV+VSFPL +DP  SLLAWTTTPWTLPSNLALCVN +  Y+K+R
Sbjct:   60 GTIKDTVTRFAHQKGHHVVRRFGWDCHGLPVEFEIDQELGIKDRDQVFAMGIAKYNQHCRSIVTRYTKEWERTVTRIGRWIDFKNDYKTLDPWFMESVWWVFSALHKKGLVYQGYKVMPFSTACGTPLSNFEAGLNYKDVQDPAVIVSFPLLSDPSTSLLAWTTTPWTLPSNLALCVNPEIRYIKVR 246
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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A7S3GN89_9STRA (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GN89_9STRA)

HSP 1 Score: 325 bits (832), Expect = 2.750e-102
Identity = 145/186 (77.96%), Postives = 165/186 (88.71%), Query Frame = 1 
Query:   22 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKL 579
            GTIKD+VTR+AHQ+GH+VSRR GWDCHGLPVEYEIDQ L+IT R  V++MG+  YN  CR IVTRY+ EWE T+ RLGRWIDF+NDYKTMDP FMESVWWVF T+ +KGLVYRGYKVMP+ST C TPLSNFEAGLNYKDV+DPA VVSFPL++DP VSLLAWTTTPWTLPSNLALCVN+ F+YVK+
Sbjct:   74 GTIKDTVTRFAHQTGHHVSRRFGWDCHGLPVEYEIDQKLKITGRQMVLDMGVANYNAECRGIVTRYTAEWEKTVNRLGRWIDFKNDYKTMDPEFMESVWWVFDTMFKKGLVYRGYKVMPYSTYCGTPLSNFEAGLNYKDVNDPAAVVSFPLESDPNVSLLAWTTTPWTLPSNLALCVNEKFEYVKI 259
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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A7S3GDZ8_9EUKA (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GDZ8_9EUKA)

HSP 1 Score: 304 bits (779), Expect = 4.970e-102
Identity = 139/187 (74.33%), Postives = 157/187 (83.96%), Query Frame = 1 
Query:   22 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 582
            GTIKD VTRYAHQ+GH+V RR GWDCHGLPVEYEIDQ L I   D V++MGI  YN  CRSIV RYS EW V ++RLGRWIDF+NDYKTM   FMESVWWVFK L +KGLVY+GYKVMP+S  CATPLSNFEA L+Y+DVSDPA+VV+FP+  D EVSLLAWTTTPWTLPSNLALCVN + DYVK++
Sbjct:   75 GTIKDIVTRYAHQTGHHVERRFGWDCHGLPVEYEIDQKLGIKSSDDVMKMGIDKYNAECRSIVMRYSTEWRVVVERLGRWIDFDNDYKTMHLSFMESVWWVFKQLFDKGLVYQGYKVMPYSMKCATPLSNFEANLDYRDVSDPAIVVNFPIIGDEEVSLLAWTTTPWTLPSNLALCVNPELDYVKVK 261
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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A7S3ZMQ5_9STRA (Isoleucine--tRNA ligase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMQ5_9STRA)

HSP 1 Score: 318 bits (816), Expect = 1.790e-101
Identity = 144/187 (77.01%), Postives = 165/187 (88.24%), Query Frame = 1 
Query:   22 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR 582
            GTIKD+VTRYAHQ+GH VSRR GWDCHGLPVEYEID++L +  R++V+ MGI  YN HCRSIV RY+REWE  + RLGRWIDFENDY+TMD  FMESVWWVFKTL +KGLVYRGYKVMP+ST CATPLSNFEAGLNYKDV+D AVVVSFPL+++P VSL+AWTTTPWTLPSNLALCVN   +YV++R
Sbjct:   73 GTIKDTVTRYAHQTGHKVSRRFGWDCHGLPVEYEIDKALGLNSREEVLAMGIGVYNSHCRSIVQRYTREWETVVTRLGRWIDFENDYRTMDLSFMESVWWVFKTLFDKGLVYRGYKVMPYSTTCATPLSNFEAGLNYKDVTDIAVVVSFPLRDEPNVSLVAWTTTPWTLPSNLALCVNAHLNYVQVR 259
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BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Match: A0A7S1XPX7_9STRA (Isoleucine--tRNA ligase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPX7_9STRA)

HSP 1 Score: 302 bits (774), Expect = 2.670e-101
Identity = 133/186 (71.51%), Postives = 157/186 (84.41%), Query Frame = 1 
Query:   22 GTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITHRDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPWFMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDPAVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKL 579
            GTIKD+VTRYAHQ+GHYV RR GWDCHGLPVE+EID+ L I  R+QV+EMGI+ YN  CRSIV RY+ EW   ++RLGRWIDF+NDYKTMD  FME++WWVF  LH++ LVY G+KVMP+ST C+TPLSNFEAG NYKDV DPAV VSFPL ++P V+ LAWTTTPWTLPSNLALCVN + +YVK+
Sbjct:   67 GTIKDTVTRYAHQTGHYVERRFGWDCHGLPVEHEIDKKLNIKTREQVLEMGIENYNNECRSIVQRYTGEWRTMVERLGRWIDFDNDYKTMDVTFMETIWWVFSELHKRNLVYYGFKVMPYSTGCSTPLSNFEAGQNYKDVKDPAVTVSFPLVDEPGVAFLAWTTTPWTLPSNLALCVNPELEYVKI 252
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25964.7080.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTL9_ECTSI3.680e-11891.44Isoleucine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A812UNE2_SYMMI7.480e-11279.14Isoleucine--tRNA ligase (Fragment) n=1 Tax=Symbiod... [more]
A0A7S2XPF3_9STRA8.060e-10779.68Isoleucine--tRNA ligase (Fragment) n=1 Tax=Attheya... [more]
A0A7S2WSX5_9STRA2.090e-10480.21Isoleucine--tRNA ligase n=2 Tax=Rhizochromulina ma... [more]
A0A482S0Q8_9ARCH6.450e-10480.75Isoleucine--tRNA ligase n=1 Tax=archaeon TaxID=190... [more]
W7U130_9STRA3.040e-10378.61Isoleucine--tRNA ligase n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S3GN89_9STRA2.750e-10277.96Isoleucine--tRNA ligase (Fragment) n=1 Tax=Spumell... [more]
A0A7S3GDZ8_9EUKA4.970e-10274.33Isoleucine--tRNA ligase (Fragment) n=1 Tax=Palpito... [more]
A0A7S3ZMQ5_9STRA1.790e-10177.01Isoleucine--tRNA ligase n=2 Tax=Pelagomonas calceo... [more]
A0A7S1XPX7_9STRA2.670e-10171.51Isoleucine--tRNA ligase n=1 Tax=Phaeomonas parva T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25964contigH-paniculata_contig25964:1824..3022 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score373.6
Seed ortholog evalue5.5e-101
Seed eggNOG ortholog2880.D7FTL9
Preferred nameILERS
KEGG rclassRC00055,RC00523
KEGG koko:K01870
KEGG ReactionR03656
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010035,GO:0010038,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0019899,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0042221,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046686,GO:0050896,GO:0051020,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Belongs to the class-I aminoacyl-tRNA synthetase family
EggNOG OGsCOG0060@1,KOG0434@2759
EC6.1.1.5
COG Functional cat.J
BiGG ReactioniRC1080.CRv4_Au5_s16_g6096_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons3
Model size585
Cds size585
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25964.7080.1prot_H-paniculata_contig25964.7080.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig25964 1824..3022 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929773.4825506-CDS-H-paniculata_contig25964:1823..19191622929773.4825506-CDS-H-paniculata_contig25964:1823..1919Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig25964 1824..1919 -
1691481004.9109206-CDS-H-paniculata_contig25964:1823..19191691481004.9109206-CDS-H-paniculata_contig25964:1823..1919Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig25964 1824..1919 -
1622929773.5123181-CDS-H-paniculata_contig25964:2319..25171622929773.5123181-CDS-H-paniculata_contig25964:2319..2517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig25964 2320..2517 -
1691481004.9249823-CDS-H-paniculata_contig25964:2319..25171691481004.9249823-CDS-H-paniculata_contig25964:2319..2517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig25964 2320..2517 -
1622929773.526927-CDS-H-paniculata_contig25964:2731..30221622929773.526927-CDS-H-paniculata_contig25964:2731..3022Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig25964 2732..3022 -
1691481004.9329503-CDS-H-paniculata_contig25964:2731..30221691481004.9329503-CDS-H-paniculata_contig25964:2731..3022Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig25964 2732..3022 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig25964.7080.1

>prot_H-paniculata_contig25964.7080.1 ID=prot_H-paniculata_contig25964.7080.1|Name=mRNA_H-paniculata_contig25964.7080.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
MFIFFSPGTIKDSVTRYAHQSGHYVSRRAGWDCHGLPVEYEIDQSLQITH
RDQVIEMGIKTYNQHCRSIVTRYSREWEVTIKRLGRWIDFENDYKTMDPW
FMESVWWVFKTLHEKGLVYRGYKVMPFSTACATPLSNFEAGLNYKDVSDP
AVVVSFPLKNDPEVSLLAWTTTPWTLPSNLALCVNKDFDYVKLR*
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mRNA from alignment at H-paniculata_contig25964:1824..3022-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig25964.7080.1 ID=mRNA_H-paniculata_contig25964.7080.1|Name=mRNA_H-paniculata_contig25964.7080.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1199bp|location=Sequence derived from alignment at H-paniculata_contig25964:1824..3022- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTTATATTTTTTTCACCAGGCACTATCAAGGACAGTGTGACCCGATA
CGCACATCAGTCCGGCCACTACGTCTCTCGACGGGCGGGCTGGGACTGTC
ATGGGTTGCCGGTGGAGTATGAGATTGATCAGTCGTTGCAAATCACCCAC
CGAGACCAGGTGATCGAGATGGGGATCAAAACCTACAACCAGCACTGTCG
GAGTATCGTGACGCGCTACTCGAGGGAGTGGGAGGTTACGATTAAGCGCC
TGGGACGCTGGATCGATTTCGAGAACGACTACAAGACCATGGTGAGGATC
TGTACGAAGAATCAAAGTATCCTTGGTCATGAAACCGTCTTGTGAAATAC
GAGACGTAGCAGCTGTGAAGAAGAGATGACTAACACCTACAGAGTGGTTC
TGGGAAAGCTGTCACGACTGCTCCATTTTCATGAACAGAGTCACGAGTTG
TGTAAGGTGATGAGGGCTAATTAACCGGTGTCTCGAATGAGAAACACTCG
CGCAGGATCCCTGGTTCATGGAAAGCGTATGGTGGGTCTTCAAAACCCTG
CATGAGAAGGGGCTAGTATATCGTGGCTACAAGGTGATGCCGTTCTCTAC
AGCATGCGCTACTCCACTCAGTAACTTCGAGGCCGGACTAAACTACAAGG
ACGTATCCGACCCAGCTGTGGTTGTTTCTTTCCCTCTCAAGAATGATCCA
GAGGTATGTTTTGCTTTTTTAGGGATAAGCGCCTTAGTGCTTACGGCCGT
CTATTAGAGTCACTGCCTCGCCCCAAAGCCCCTGTACAGTCATGTGATTG
GTACAGGGGAAATGGCGTTCGCGGCGCACAAGGTGGCCAATATAAACTAT
ACAAAAGCGGGTGCGATGAAGAGCATGCCTTTCGACGGTATATGGTTGTC
ATAACTGTTCCGTCTATATTCAGGTGTGTAAACCACACCCGACATGGAAT
ACTTGGGTGTCCGATTGGGGTATTTTATGGAGATTCGCGTTTTTCGTGTG
AATACACAACGCGAGGATCTCCTTTTGGATTTTCGATAACCGTGATATGT
CTCGCATGTTGCCCTTTATTCGACATGTCTTCCGCGCAATTCGACTTCTC
AAGGTGAGTTTACTGGCGTGGACAACCACCCCTTGGACTTTACCGTCCAA
CCTGGCGCTCTGTGTCAACAAGGACTTCGATTATGTCAAGCTCAGGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig25964:1824..3022-

>mRNA_H-paniculata_contig25964.7080.1 ID=mRNA_H-paniculata_contig25964.7080.1|Name=mRNA_H-paniculata_contig25964.7080.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig25964:1824..3022- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTTATATTTTTTTCACCAGGCACTATCAAGGACAGTGTGACCCGATA
CGCACATCAGTCCGGCCACTACGTCTCTCGACGGGCGGGCTGGGACTGTC
ATGGGTTGCCGGTGGAGTATGAGATTGATCAGTCGTTGCAAATCACCCAC
CGAGACCAGGTGATCGAGATGGGGATCAAAACCTACAACCAGCACTGTCG
GAGTATCGTGACGCGCTACTCGAGGGAGTGGGAGGTTACGATTAAGCGCC
TGGGACGCTGGATCGATTTCGAGAACGACTACAAGACCATGATGTTTATA
TTTTTTTCACCAGGCACTATCAAGGACAGTGTGACCCGATACGCACATCA
GTCCGGCCACTACGTCTCTCGACGGGCGGGCTGGGACTGTCATGGGTTGC
CGGTGGAGTATGAGATTGATCAGTCGTTGCAAATCACCCACCGAGACCAG
GTGATCGAGATGGGGATCAAAACCTACAACCAGCACTGTCGGAGTATCGT
GACGCGCTACTCGAGGGAGTGGGAGGTTACGATTAAGCGCCTGGGACGCT
GGATCGATTTCGAGAACGACTACAAGACCATGGATCCCTGGTTCATGGAA
AGCGTATGGTGGGTCTTCAAAACCCTGCATGAGAAGGGGCTAGTATATCG
TGGCTACAAGGTGATGCCGTTCTCTACAGCATGCGCTACTCCACTCAGTA
ACTTCGAGGCCGGACTAAACTACAAGGACGTATCCGACCCAGCTGTGGTT
GTTTCTTTCCCTCTCAAGAATGATCCAGAGGATCCCTGGTTCATGGAAAG
CGTATGGTGGGTCTTCAAAACCCTGCATGAGAAGGGGCTAGTATATCGTG
GCTACAAGGTGATGCCGTTCTCTACAGCATGCGCTACTCCACTCAGTAAC
TTCGAGGCCGGACTAAACTACAAGGACGTATCCGACCCAGCTGTGGTTGT
TTCTTTCCCTCTCAAGAATGATCCAGAGGTGAGTTTACTGGCGTGGACAA
CCACCCCTTGGACTTTACCGTCCAACCTGGCGCTCTGTGTCAACAAGGAC
TTCGATTATGTCAAGCTCAGGTAAGTGAGTTTACTGGCGTGGACAACCAC
CCCTTGGACTTTACCGTCCAACCTGGCGCTCTGTGTCAACAAGGACTTCG
ATTATGTCAAGCTCAGGTAA
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