prot_H-paniculata_contig2580.7034.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2580.7034.1
Unique Nameprot_H-paniculata_contig2580.7034.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length274
Homology
BLAST of mRNA_H-paniculata_contig2580.7034.1 vs. uniprot
Match: D7G5S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S9_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 7.080e-16
Identity = 52/133 (39.10%), Postives = 70/133 (52.63%), Query Frame = 0
Query:   25 SFMEVDELGDGQSVSGGKGGKMDAYGPYGSPLGRLENFPNMPPLLVIATGSGAGLLLAFSAHVTSRLSTAAAACTNNDRSRQGEHQQEHEVVAEVSFRPVTVCFASDSEPLLRFVTNALLVRKPEGVRVRTAL 157
            S  +V+E  D +++       +  YGPY S  GRLE FPN+PPLL+IATG+GAGL+L F   V ++  T                            RPV VC++S S  LL+FVTN LL  +  G++V TAL
Sbjct:   37 SIADVEETNDLETIP------LRVYGPYRSEYGRLEEFPNLPPLLIIATGAGAGLVLDFVGFVRAKKITPK--------------------------RPVKVCYSSASLALLQFVTNTLLAERTPGIQVETAL 137          
BLAST of mRNA_H-paniculata_contig2580.7034.1 vs. uniprot
Match: D7G5T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T0_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 7.390e-13
Identity = 46/118 (38.98%), Postives = 65/118 (55.08%), Query Frame = 0
Query:   45 KMDAYGPYGSPLGRLENFPNMPPLLVIATGSGAGLLLAFSAHVTSRLSTAAAACTNNDRSRQGEHQQEHEVVAEVSFRPVTVCFASDSEPLLRFVTNALLVRKPEGVRVRTALLLGDD 162
            ++  YGPY S  GRL  FP++PPLL++ATG+GA L+L F  +V +          NN                 V  RPV+VC++S S  LL+FVTN LL  +  G+ ++TAL   +D
Sbjct:  697 QLRTYGPYRSEYGRLAEFPHLPPLLIVATGAGAALVLDFIGYVRA----------NNI----------------VPLRPVSVCYSSASLALLQFVTNTLLAERSPGIHIQTALTRHED 788          
BLAST of mRNA_H-paniculata_contig2580.7034.1 vs. uniprot
Match: D8LCP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP9_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 2.400e-11
Identity = 45/118 (38.14%), Postives = 64/118 (54.24%), Query Frame = 0
Query:   45 KMDAYGPYGSPLGRLENFPNMPPLLVIATGSGAGLLLAFSAHVTSRLSTAAAACTNNDRSRQGEHQQEHEVVAEVSFRPVTVCFASDSEPLLRFVTNALLVRKPEGVRVRTALLLGDD 162
            ++  YGPY S  GRL  FP++PPLL++ATG+GA L+L F  +V +          NN                 V  RPV+V ++S S  LL+FVTN LL  +  G+ ++TAL   +D
Sbjct:  473 ELRTYGPYRSEYGRLVEFPHLPPLLIVATGAGAALVLDFIGYVRA----------NNI----------------VPLRPVSVYYSSASLALLQFVTNTLLAERSPGIHIQTALTRHED 564          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2580.7034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G5S9_ECTSI7.080e-1639.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5T0_ECTSI7.390e-1338.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCP9_ECTSI2.400e-1138.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2580contigH-paniculata_contig2580:10538..17829 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2580.7034.1mRNA_H-paniculata_contig2580.7034.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2580 10470..20718 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2580.7034.1 ID=prot_H-paniculata_contig2580.7034.1|Name=mRNA_H-paniculata_contig2580.7034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=274bp
MAPTEANSSVAETRRSTARGLMGSSFMEVDELGDGQSVSGGKGGKMDAYG
PYGSPLGRLENFPNMPPLLVIATGSGAGLLLAFSAHVTSRLSTAAAACTN
NDRSRQGEHQQEHEVVAEVSFRPVTVCFASDSEPLLRFVTNALLVRKPEG
VRVRTALLLGDDEAVASFAKRRGAKGAAGATKGQCLGPGESDVTKAGGME
DPAGGGGNGSDHQSGGEGHREKEPILGRLDVEGLIARSSSDTEIFFCGER
RFGGKIRRMCSRACLKYSGTYVE*
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