|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 2204 |
| Cds size | 2130 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1108.700.1 >prot_H-paniculata_contig1108.700.1 ID=prot_H-paniculata_contig1108.700.1|Name=mRNA_H-paniculata_contig1108.700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=710bp
MSESDRNEMGPVGGSGDDDEEDDDILVGLTDDCTKHVSEGALEGKWNRKR
QLEMDILEAKEWVKGQVSCLPPLLGDTEIDDGSHPSSAGDPHGDHHATGD
GPGGRDSVEGACSGGGVVPILELAAGAAAADNSGGGSKRRVKSSSGPMRS
RRQCVEFTCPAFPRWGNSSRDVFGCDKHKLLGMVDLRRRTCEAPGCGKGA
GFGFEGDTTRFCSLHKEAGMVNFRGKRCESRGCRRHPLYGHEGRGRQFCK
SHRVEGMIYKVGNNCQVAGCSRPARFGMVGEEVKSCVEHKTDDMVDAHHR
FCEAPQCKVTPSFGFEGGKARFCQAHKQEMMVNVSQRRCEHEKCHRQPLW
GWPVEQRARMCGAHKAPGMDNIHVKRCEAVECRKQPNFGNPADRVRRFCK
DHKTLVCVNVSTKPCEYPGCGATARCGYDDQAAVFCRVHRAEGMRVVQRR
VCRELGCDKMPSYGFEADRKRLYCAQHRLHGMTSLARKCQRDGCQTEPQF
NCPGIRSPKFCLKHKDDGMMDVVSRKCQMERCMKRPWYSYDGARPVLCAE
HKAPGMIGYRPAQRDVNCRAGAGEGANIAGIDGGVEAVGSMIDGGVGGGE
EGFVESGRKRTYADMGMLDSDHSSNVHEQQQHHHHDSHHPSDAIGGGEHC
VGGGDTGVGGGEPDLVVSEGLHTVGLEAMGMGEVEVGLEDVRALELDDIS
GGVLEPSRME back to topmRNA from alignment at H-paniculata_contig1108:21324..24428- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1108.700.1 ID=mRNA_H-paniculata_contig1108.700.1|Name=mRNA_H-paniculata_contig1108.700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3105bp|location=Sequence derived from alignment at H-paniculata_contig1108:21324..24428- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCTGGTTCGTCGTGACATCTCCGCGCGCCGAGCAGGCACTGAGAAGACA
AGGGATGCTGAGACAAACAGCAGATGTCAGAGTCAGACCGAAATGAGATG
GGGCCGGTGGGCGGGAGTGGAGACGATGATGAGGAAGATGATGATATACT
GGTCGGTCTGACCGACGACTGTACCAAGCACGTGTCTGAGGGTGCCCTTG
AGGGTAAATGGAACAGGAAGAGGCAGCTGGAGATGGACATCCTCGAGGCC
AAGGAGTGGGTAAAAGGGCAGGTCTCTTGCCTGCCTCCCCTGTTGGGTGA
CACAGAAATTGACGACGGGAGTCATCCCAGCAGCGCGGGCGACCCACATG
GAGATCATCATGCCACGGGTGATGGGCCCGGCGGCCGCGATTCGGTCGAA
GGCGCTTGTTCAGGCGGCGGTGTTGTACCGATCCTCGAGCTCGCAGCGGG
GGCGGCGGCGGCGGACAACAGTGGAGGCGGCAGCAAGAGAAGAGTAAAAT
CGTCCTCGGGACCCATGCGATCGCGGAGGCAGTGCGTGGAGTTCACGTGC
CCCGCGTTTCCACGCTGGGGTAATTCGTCTCGAGACGTGTTTGGGTGTGA
CAAGCACAAGCTGTTGGGTATGGTGGATTTGAGGCGGCGGACCTGCGAAG
CCCCAGGGTGTGGGAAAGGTGCCGGCTTCGGGTTCGAGGGGGATACGACG
CGTTTTTGCTCGCTCCATAAGGAGGCGGGCATGGTGAACTTCAGAGGAAA
GCGTTGCGAGTCGCGCGGATGCCGGAGGCATCCTCTGTATGGGCACGAGG
GCAGAGGACGGCAGTTTTGCAAAAGCCATCGGGTGGAAGGTATGATATAC
AAGGTCGGGAACAACTGTCAGGTGGCAGGGTGCTCGCGGCCCGCACGCTT
TGGCATGGTCGGCGAAGAAGTGAAGTCCTGCGTTGAGCACAAGACGGATG
ACATGGTAGACGCGCACCACCGTTTTTGCGAGGCGCCACAATGCAAGGTG
CCTACACTACTGTAACTATATCTACTGTATAGTACAGAGATAGAATTAGG
CTGCGTCGGTGAAGGAGTACTCATCGTACAAATACCCGTTAAGGCTTTGC
AACACTTACGTTCTCTGTGGCGGTATTTTTGGTATTTCATGCTTCGATAC
GACTGCAAAAAAATCAGCCTTGCTGCGCGATTGCCTTTGTTTGAAAACTG
GGCTGTCCTTATGAAGCCTAACTTGTGGTCCTGCGATGGACTTGTACTGG
ATTGCGGCGCTACTTTACCTCAACTAAAGAATGTATATCCTTGAAGCAGC
ATAACATTGGAATATGGAGAGCGCGACCGGGTAGCTCTTCGCTTCGCGAT
TACCAAGAGAAAATAAACTACTGCATGTTCGTTTTGTTTTGCCTTTCTTT
TCGTTTCCGGTCGGAAAACTAAAAATCGTTCGTCGCCAATTAGGTGACTC
CAAGCTTTGGCTTCGAGGGAGGAAAGGCGCGCTTCTGCCAGGCCCACAAG
CAAGAAATGATGGTCAACGTTTCCCAGCGCCGCTGCGAGCACGAGAAGTG
CCACCGTCAGCCGCTTTGGGGCTGGCCCGTAGAACAGCGAGCGCGAATGT
GCGGGGCGCACAAAGCCCCCGGCATGGACAACATCCACGTCAAACGATGC
GAGGCGGTCGAGTGTCGGAAGCAACCAAACTTTGGGAATCCGGCGGATCG
CGTGCGGCGCTTTTGCAAAGACCACAAGACACTGGTCTGTGTCAATGTGT
CCACAAAGCCGTGCGAGTATCCCGGTTGCGGCGCCACTGCGCGTTGCGGG
TACGACGACCAGGCGGCTGTCTTCTGCCGGGTGCACCGAGCCGAGGGTAT
GCGCGTGGTCCAGCGGAGGGTATGCCGCGAGCTTGGGTGCGACAAGATGC
CTAGCTACGGTTTCGAAGCGGACCGCAAGAGACTCTATTGCGCACAGCAC
CGCCTCCACGGAATGACTAGCCTGGCTCGTAAGTGTCAGAGGGACGGCTG
CCAGACAGAGCCTCAGTTCAACTGTCCTGGTATACGGTCACCGAAGTTTT
GCCTGGTGAGTGGAATGGAAACTGCAAATATTTTGAGGCACTCACACTGC
TTTCTCTACTTCCCCGTTCTTATCCCGGACCTGCGCTGTGCGATTATACT
TATTATCTCTCTCACATGGCGTCACGACTCGTGTCGCGTAATGGCTTTAC
TGCGTCCAAGGGAGTCTTACCTTTCCCGCATCCCGTGCTGTAGGGGTTGG
GTTTGCTCCATCCTCGTCACCTACTCCAAATGTTGTAGCGACGCCCTGAC
GAGATGAAGTGGCACCTAACATTTACCGTGGGGACATATCCATGCGCAGT
ACGATGTGCCACCATTTGATTCTACAAAACCTCGCTGTCCTTACCCTTAA
TCGAAACCGACTCTAACTGATCTCATATCGAAATCTTGGCTTTGCGATTC
CCGCGCCTCTTGTCACCGCTTTGCTTCCTATTCACAATCTCACGATGCCT
GCGGATCGTAGAAGCACAAAGATGACGGAATGATGGACGTGGTGTCCCGC
AAGTGCCAGATGGAAAGATGCATGAAGCGCCCGTGGTACAGCTACGATGG
CGCACGGCCCGTCCTCTGCGCGGAGCACAAGGCGCCCGGGATGATCGGGT
ACCGGCCAGCCCAAAGAGATGTGAACTGCCGAGCGGGCGCAGGAGAGGGG
GCCAACATAGCCGGTATTGACGGCGGTGTGGAAGCTGTAGGATCCATGAT
AGATGGTGGCGTTGGCGGCGGTGAGGAAGGGTTTGTGGAGTCAGGTCGCA
AACGAACATATGCAGATATGGGCATGCTCGACAGTGACCACAGCAGCAAC
GTTCATGAACAGCAGCAGCACCATCATCATGATTCCCATCACCCAAGTGA
TGCTATTGGTGGCGGCGAGCACTGTGTAGGTGGCGGTGATACAGGTGTCG
GAGGCGGCGAACCGGACTTGGTTGTTTCCGAAGGTCTACACACCGTGGGC
CTGGAGGCGATGGGCATGGGTGAGGTTGAAGTAGGACTTGAAGACGTCAG
GGCCCTAGAGCTGGACGATATAAGCGGAGGGGTTTTGGAACCGTCGAGGA
TGGAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1108:21324..24428- >mRNA_H-paniculata_contig1108.700.1 ID=mRNA_H-paniculata_contig1108.700.1|Name=mRNA_H-paniculata_contig1108.700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4260bp|location=Sequence derived from alignment at H-paniculata_contig1108:21324..24428- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCAGAGTCAGACCGAAATGAGATGGGGCCGGTGGGCGGGAGTGGAGA
CGATGATGAGGAAGATGATGATATACTGGTCGGTCTGACCGACGACTGTA
CCAAGCACGTGTCTGAGGGTGCCCTTGAGGGTAAATGGAACAGGAAGAGG
CAGCTGGAGATGGACATCCTCGAGGCCAAGGAGTGGGTAAAAGGGCAGGT
CTCTTGCCTGCCTCCCCTGTTGGGTGACACAGAAATTGACGACGGGAGTC
ATCCCAGCAGCGCGGGCGACCCACATGGAGATCATCATGCCACGGGTGAT
GGGCCCGGCGGCCGCGATTCGGTCGAAGGCGCTTGTTCAGGCGGCGGTGT
TGTACCGATCCTCGAGCTCGCAGCGGGGGCGGCGGCGGCGGACAACAGTG
GAGGCGGCAGCAAGAGAAGAGTAAAATCGTCCTCGGGACCCATGCGATCG
CGGAGGCAGTGCGTGGAGTTCACGTGCCCCGCGTTTCCACGCTGGGGTAA
TTCGTCTCGAGACGTGTTTGGGTGTGACAAGCACAAGCTGTTGGGTATGG
TGGATTTGAGGCGGCGGACCTGCGAAGCCCCAGGGTGTGGGAAAGGTGCC
GGCTTCGGGTTCGAGGGGGATACGACGCGTTTTTGCTCGCTCCATAAGGA
GGCGGGCATGGTGAACTTCAGAGGAAAGCGTTGCGAGTCGCGCGGATGCC
GGAGGCATCCTCTGTATGGGCACGAGGGCAGAGGACGGCAGTTTTGCAAA
AGCCATCGGGTGGAAGGTATGATATACAAGGTCGGGAACAACTGTCAGGT
GGCAGGGTGCTCGCGGCCCGCACGCTTTGGCATGGTCGGCGAAGAAGTGA
AGTCCTGCGTTGAGCACAAGACGGATGACATGGTAGACGCGCACCACCGT
TTTTGCGAGGCGCCACAATGCAAGATGTCAGAGTCAGACCGAAATGAGAT
GGGGCCGGTGGGCGGGAGTGGAGACGATGATGAGGAAGATGATGATATAC
TGGTCGGTCTGACCGACGACTGTACCAAGCACGTGTCTGAGGGTGCCCTT
GAGGGTAAATGGAACAGGAAGAGGCAGCTGGAGATGGACATCCTCGAGGC
CAAGGAGTGGGTAAAAGGGCAGGTCTCTTGCCTGCCTCCCCTGTTGGGTG
ACACAGAAATTGACGACGGGAGTCATCCCAGCAGCGCGGGCGACCCACAT
GGAGATCATCATGCCACGGGTGATGGGCCCGGCGGCCGCGATTCGGTCGA
AGGCGCTTGTTCAGGCGGCGGTGTTGTACCGATCCTCGAGCTCGCAGCGG
GGGCGGCGGCGGCGGACAACAGTGGAGGCGGCAGCAAGAGAAGAGTAAAA
TCGTCCTCGGGACCCATGCGATCGCGGAGGCAGTGCGTGGAGTTCACGTG
CCCCGCGTTTCCACGCTGGGGTAATTCGTCTCGAGACGTGTTTGGGTGTG
ACAAGCACAAGCTGTTGGGTATGGTGGATTTGAGGCGGCGGACCTGCGAA
GCCCCAGGGTGTGGGAAAGGTGCCGGCTTCGGGTTCGAGGGGGATACGAC
GCGTTTTTGCTCGCTCCATAAGGAGGCGGGCATGGTGAACTTCAGAGGAA
AGCGTTGCGAGTCGCGCGGATGCCGGAGGCATCCTCTGTATGGGCACGAG
GGCAGAGGACGGCAGTTTTGCAAAAGCCATCGGGTGGAAGGTATGATATA
CAAGGTCGGGAACAACTGTCAGGTGGCAGGGTGCTCGCGGCCCGCACGCT
TTGGCATGGTCGGCGAAGAAGTGAAGTCCTGCGTTGAGCACAAGACGGAT
GACATGGTAGACGCGCACCACCGTTTTTGCGAGGCGCCACAATGCAAGGT
GACTCCAAGCTTTGGCTTCGAGGGAGGAAAGGCGCGCTTCTGCCAGGCCC
ACAAGCAAGAAATGATGGTCAACGTTTCCCAGCGCCGCTGCGAGCACGAG
AAGTGCCACCGTCAGCCGCTTTGGGGCTGGCCCGTAGAACAGCGAGCGCG
AATGTGCGGGGCGCACAAAGCCCCCGGCATGGACAACATCCACGTCAAAC
GATGCGAGGCGGTCGAGTGTCGGAAGCAACCAAACTTTGGGAATCCGGCG
GATCGCGTGCGGCGCTTTTGCAAAGACCACAAGACACTGGTCTGTGTCAA
TGTGTCCACAAAGCCGTGCGAGTATCCCGGTTGCGGCGCCACTGCGCGTT
GCGGGTACGACGACCAGGCGGCTGTCTTCTGCCGGGTGCACCGAGCCGAG
GGTATGCGCGTGGTCCAGCGGAGGGTATGCCGCGAGCTTGGGTGCGACAA
GATGCCTAGCTACGGTTTCGAAGCGGACCGCAAGAGACTCTATTGCGCAC
AGCACCGCCTCCACGGAATGACTAGCCTGGCTCGTAAGTGTCAGAGGGAC
GGCTGCCAGACAGAGCCTCAGTTCAACTGTCCTGGTATACGGTCACCGAA
GTTTTGCCTGGTGACTCCAAGCTTTGGCTTCGAGGGAGGAAAGGCGCGCT
TCTGCCAGGCCCACAAGCAAGAAATGATGGTCAACGTTTCCCAGCGCCGC
TGCGAGCACGAGAAGTGCCACCGTCAGCCGCTTTGGGGCTGGCCCGTAGA
ACAGCGAGCGCGAATGTGCGGGGCGCACAAAGCCCCCGGCATGGACAACA
TCCACGTCAAACGATGCGAGGCGGTCGAGTGTCGGAAGCAACCAAACTTT
GGGAATCCGGCGGATCGCGTGCGGCGCTTTTGCAAAGACCACAAGACACT
GGTCTGTGTCAATGTGTCCACAAAGCCGTGCGAGTATCCCGGTTGCGGCG
CCACTGCGCGTTGCGGGTACGACGACCAGGCGGCTGTCTTCTGCCGGGTG
CACCGAGCCGAGGGTATGCGCGTGGTCCAGCGGAGGGTATGCCGCGAGCT
TGGGTGCGACAAGATGCCTAGCTACGGTTTCGAAGCGGACCGCAAGAGAC
TCTATTGCGCACAGCACCGCCTCCACGGAATGACTAGCCTGGCTCGTAAG
TGTCAGAGGGACGGCTGCCAGACAGAGCCTCAGTTCAACTGTCCTGGTAT
ACGGTCACCGAAGTTTTGCCTGAAGCACAAAGATGACGGAATGATGGACG
TGGTGTCCCGCAAGTGCCAGATGGAAAGATGCATGAAGCGCCCGTGGTAC
AGCTACGATGGCGCACGGCCCGTCCTCTGCGCGGAGCACAAGGCGCCCGG
GATGATCGGGTACCGGCCAGCCCAAAGAGATGTGAACTGCCGAGCGGGCG
CAGGAGAGGGGGCCAACATAGCCGGTATTGACGGCGGTGTGGAAGCTGTA
GGATCCATGATAGATGGTGGCGTTGGCGGCGGTGAGGAAGGGTTTGTGGA
GTCAGGTCGCAAACGAACATATGCAGATATGGGCATGCTCGACAGTGACC
ACAGCAGCAACGTTCATGAACAGCAGCAGCACCATCATCATGATTCCCAT
CACCCAAGTGATGCTATTGGTGGCGGCGAGCACTGTGTAGGTGGCGGTGA
TACAGGTGTCGGAGGCGGCGAACCGGACTTGGTTGTTTCCGAAGGTCTAC
ACACCGTGGGCCTGGAGGCGATGGGCATGGGTGAGGTTGAAGTAGGACTT
GAAGACGTCAGGGCCCTAGAGCTGGACGATATAAGCGGAGGGGTTTTGGA
ACCGTCGAGGATGGAGAAGCACAAAGATGACGGAATGATGGACGTGGTGT
CCCGCAAGTGCCAGATGGAAAGATGCATGAAGCGCCCGTGGTACAGCTAC
GATGGCGCACGGCCCGTCCTCTGCGCGGAGCACAAGGCGCCCGGGATGAT
CGGGTACCGGCCAGCCCAAAGAGATGTGAACTGCCGAGCGGGCGCAGGAG
AGGGGGCCAACATAGCCGGTATTGACGGCGGTGTGGAAGCTGTAGGATCC
ATGATAGATGGTGGCGTTGGCGGCGGTGAGGAAGGGTTTGTGGAGTCAGG
TCGCAAACGAACATATGCAGATATGGGCATGCTCGACAGTGACCACAGCA
GCAACGTTCATGAACAGCAGCAGCACCATCATCATGATTCCCATCACCCA
AGTGATGCTATTGGTGGCGGCGAGCACTGTGTAGGTGGCGGTGATACAGG
TGTCGGAGGCGGCGAACCGGACTTGGTTGTTTCCGAAGGTCTACACACCG
TGGGCCTGGAGGCGATGGGCATGGGTGAGGTTGAAGTAGGACTTGAAGAC
GTCAGGGCCCTAGAGCTGGACGATATAAGCGGAGGGGTTTTGGAACCGTC
GAGGATGGAG back to top
|