prot_H-paniculata_contig2561.6972.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2561.6972.1
Unique Nameprot_H-paniculata_contig2561.6972.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length92
Homology
BLAST of mRNA_H-paniculata_contig2561.6972.1 vs. uniprot
Match: D8LRM6_ECTSI (Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRM6_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 2.460e-49
Identity = 80/91 (87.91%), Postives = 84/91 (92.31%), Query Frame = 0
Query:    1 MSARPVIKTSTMAADMQEAAIQATQVAQDAIRDNNLEKEIANAVKTAFTHLYPSLWHCFVGRNFGCYVTHEHTKFIYLYIGQLGVCLFSTA 91
            MSARPVIKTSTMA DMQEAAIQ   VAQDAIRDNNLEK+IANAVK AF  LYPSLWHCFVGRNFGC+VTHEHTKF+YLYIGQ+GVCLFSTA
Sbjct:    1 MSARPVIKTSTMAPDMQEAAIQ---VAQDAIRDNNLEKDIANAVKAAFEGLYPSLWHCFVGRNFGCFVTHEHTKFVYLYIGQIGVCLFSTA 88          
BLAST of mRNA_H-paniculata_contig2561.6972.1 vs. uniprot
Match: A0A836CI24_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI24_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.380e-44
Identity = 73/91 (80.22%), Postives = 81/91 (89.01%), Query Frame = 0
Query:    1 MSARPVIKTSTMAADMQEAAIQATQVAQDAIRDNNLEKEIANAVKTAFTHLYPSLWHCFVGRNFGCYVTHEHTKFIYLYIGQLGVCLFSTA 91
            MSARPVIKTSTM ADMQEAAIQ   VAQDAI+DNNLEKEIA+A+KT F  +YPS+WHCFVGRNFG +VTHE +KFIY YIGQ+GVCLFSTA
Sbjct:    1 MSARPVIKTSTMPADMQEAAIQ---VAQDAIKDNNLEKEIAHAIKTNFERIYPSVWHCFVGRNFGSFVTHEQSKFIYFYIGQMGVCLFSTA 88          
BLAST of mRNA_H-paniculata_contig2561.6972.1 vs. uniprot
Match: A0A7S1UG18_9STRA (Dynein light chain n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UG18_9STRA)

HSP 1 Score: 109 bits (272), Expect = 6.370e-29
Identity = 50/85 (58.82%), Postives = 66/85 (77.65%), Query Frame = 0
Query:    6 VIKTSTMAADMQEAAIQATQVAQDAIRDNNLEKEIANAVKTAFTHLYPSLWHCFVGRNFGCYVTHEHTKFIYLYIGQLGVCLFST 90
            V+K S M  +MQ+AA+Q   +AQDAIR++  E+EIA+A+K  F  +Y + WHCFVGRNFGCYVTH+   F+Y YIGQLG+CLF+T
Sbjct:   41 VVKASRMEQEMQDAAVQ---IAQDAIREHMTEQEIASAIKQQFESIYHTTWHCFVGRNFGCYVTHQENAFVYFYIGQLGICLFAT 122          
BLAST of mRNA_H-paniculata_contig2561.6972.1 vs. uniprot
Match: A0A7S2STQ1_9STRA (Dynein light chain n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STQ1_9STRA)

HSP 1 Score: 108 bits (271), Expect = 7.380e-29
Identity = 55/91 (60.44%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    1 MSARPVIKTSTMAADMQEAAIQATQVAQDAIRDNNLEKEIANAVKTAFTHLYPSLWHCFVGRNFGCYVTHEHTKFIYLYIGQLGVCLFSTA 91
            M+ARPVIK S+M  DMQE AIQ    AQDAI   N E+EIA A++     ++P+ WH  VGRNFGC+VTHE +KFIY YIGQ+GVC+F+TA
Sbjct:   29 MAARPVIKHSSMTPDMQEMAIQC---AQDAIAAKNTEQEIAMAIRQNIETMFPATWHVLVGRNFGCFVTHEASKFIYFYIGQVGVCMFATA 116          
BLAST of mRNA_H-paniculata_contig2561.6972.1 vs. uniprot
Match: A0A7S1C452_9STRA (Dynein light chain n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C452_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.870e-23
Identity = 48/85 (56.47%), Postives = 59/85 (69.41%), Query Frame = 0
Query:    6 VIKTSTMAADMQEAAIQATQVAQDAIRDNNLEKEIANAVKTAFTHLYPSLWHCFVGRNFGCYVTHEHTKFIYLYIGQLGVCLFST 90
            ++K + M   M E AI    VA  AI+  N EKE A+A+K     L+P +WHCFVGR FGCYVTHE +KFIY Y+GQLGVCLFS+
Sbjct:   95 IVKLNQMETVMAERAID---VALRAIKSCNTEKETASAIKAQMEALFPGVWHCFVGRKFGCYVTHESSKFIYFYVGQLGVCLFSS 176          
BLAST of mRNA_H-paniculata_contig2561.6972.1 vs. uniprot
Match: K3WKC4_GLOUD (Dynein light chain n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKC4_GLOUD)

HSP 1 Score: 85.1 bits (209), Expect = 9.480e-20
Identity = 47/89 (52.81%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    4 RPVIKTSTMAADMQEAAIQATQVAQDAIRDNNLEKEIANAVKTAFTHLYPS-LWHCFVGRNFGCYVTHEHTKFIYLYIGQLGVCLFSTA 91
            +PV+KTSTM  D+Q+  I   Q A D   D   E++IA  VK  F   Y   LWHC VGRN  CYVTHE +KF+Y YIGQ+ V LF+TA
Sbjct:    5 KPVVKTSTMDPDLQDEVILVAQHAMDTEID---EQQIAAKVKQHFEQKYHGMLWHCCVGRNVACYVTHEQSKFLYFYIGQMAVVLFATA 90          
BLAST of mRNA_H-paniculata_contig2561.6972.1 vs. uniprot
Match: U4LB13_PYROM (Dynein light chain n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4LB13_PYROM)

HSP 1 Score: 84.3 bits (207), Expect = 2.860e-19
Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    7 IKTSTMAADMQE-AAIQATQVAQDAIRDNNLEKEIANAVKTAFTHLYPSLWHCFVGRNFGCYVTHEHTKFIYLYIGQLGVCLFSTA 91
            +KT+  + DM E  A  A +VA+ A+++NN+EK+IA  +K  F   Y + WHC VGRNFG +VTHE   FIY Y+G L V L+ TA
Sbjct:   20 LKTTVKSVDMAEDMAAAAQEVAKKAMKENNVEKDIAQMIKKEFDAKYGNTWHCIVGRNFGSFVTHETKHFIYFYVGNLAVLLYKTA 105          
BLAST of mRNA_H-paniculata_contig2561.6972.1 vs. uniprot
Match: A0A3P6THM2_DIBLA (Dynein light chain n=1 Tax=Dibothriocephalus latus TaxID=60516 RepID=A0A3P6THM2_DIBLA)

HSP 1 Score: 80.9 bits (198), Expect = 4.570e-18
Identity = 40/89 (44.94%), Postives = 59/89 (66.29%), Query Frame = 0
Query:    2 SARPVIKTSTMAADMQEAAIQATQVAQDAIRDNNLEKEIANAVKTAFTHLYPSLWHCFVGRNFGCYVTHEHTKFIYLYIGQLGVCLFST 90
            S + ++K + M+ DMQ+ AIQA    ++A++  N+EK+IA  +K  F   +   WHC VGRNFG YVTHE  +FIY Y+GQ+ + LF +
Sbjct:    5 SDQAIVKNADMSEDMQQDAIQA---GKEALKQYNIEKDIAAYIKKKFDKDHGPTWHCIVGRNFGSYVTHETKQFIYFYMGQVAILLFKS 90          
BLAST of mRNA_H-paniculata_contig2561.6972.1 vs. uniprot
Match: A0A183SDF9_SCHSO (Dynein light chain n=3 Tax=Diphyllobothriidae TaxID=28843 RepID=A0A183SDF9_SCHSO)

HSP 1 Score: 80.9 bits (198), Expect = 4.820e-18
Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = 0
Query:    4 RPVIKTSTMAADMQEAAIQATQVAQDAIRDNNLEKEIANAVKTAFTHLYPSLWHCFVGRNFGCYVTHEHTKFIYLYIGQLGVCLFST 90
            R ++K + M  DMQ+ A++   VA  A+  N +EKEIA  +K  F   +   WHC VGRNFGCYVTHE   FIY  +GQ  + LF +
Sbjct:    9 RAIVKNADMPEDMQQDAVE---VATTAMNHNTIEKEIAAEIKKEFDRRFNPNWHCIVGRNFGCYVTHETKSFIYFLMGQTAILLFKS 92          
BLAST of mRNA_H-paniculata_contig2561.6972.1 vs. uniprot
Match: A0A067CKL0_SAPPC (Dynein light chain n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CKL0_SAPPC)

HSP 1 Score: 80.5 bits (197), Expect = 6.650e-18
Identity = 45/91 (49.45%), Postives = 56/91 (61.54%), Query Frame = 0
Query:    2 SARPVIKTSTMAADMQEAAIQATQVAQDAIRDNNLEKEIANAVKTAFTHLYPS-LWHCFVGRNFGCYVTHEHTKFIYLYIGQLGVCLFSTA 91
            S +PV+K STM  D+ +  I    VAQ AI     E+ IA  +K  F   Y   LWHC VGRN  CYVTHE +KF+Y YIGQ+ + LF+TA
Sbjct:    5 SVKPVVKNSTMDQDLLDEVIW---VAQAAIESEVNEQHIAAKIKKHFELKYHGMLWHCCVGRNMACYVTHEQSKFLYFYIGQMAIVLFATA 92          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2561.6972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRM6_ECTSI2.460e-4987.91Dynein light chain n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A836CI24_9STRA5.380e-4480.22Dynein light chain n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S1UG18_9STRA6.370e-2958.82Dynein light chain n=1 Tax=Phaeomonas parva TaxID=... [more]
A0A7S2STQ1_9STRA7.380e-2960.44Dynein light chain n=1 Tax=Rhizochromulina marina ... [more]
A0A7S1C452_9STRA1.870e-2356.47Dynein light chain n=1 Tax=Bicosoecida sp. CB-2014... [more]
K3WKC4_GLOUD9.480e-2052.81Dynein light chain n=1 Tax=Globisporangium ultimum... [more]
U4LB13_PYROM2.860e-1948.84Dynein light chain n=1 Tax=Pyronema omphalodes (st... [more]
A0A3P6THM2_DIBLA4.570e-1844.94Dynein light chain n=1 Tax=Dibothriocephalus latus... [more]
A0A183SDF9_SCHSO4.820e-1845.98Dynein light chain n=3 Tax=Diphyllobothriidae TaxI... [more]
A0A067CKL0_SAPPC6.650e-1849.45Dynein light chain n=3 Tax=Saprolegniaceae TaxID=4... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 1..90
e-value: 2.5E-29
score: 113.4
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 5..89
e-value: 3.9E-26
score: 91.2
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 5..89
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10coord: 1..90
e-value: 3.3E-28
score: 99.6
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 4..90
NoneNo IPR availablePANTHERPTHR11886:SF35DYNEIN LIGHT CHAIN 2, CYTOPLASMICcoord: 5..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2561contigH-paniculata_contig2561:7355..8394 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2561.6972.1mRNA_H-paniculata_contig2561.6972.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2561 7355..8394 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2561.6972.1 ID=prot_H-paniculata_contig2561.6972.1|Name=mRNA_H-paniculata_contig2561.6972.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
MSARPVIKTSTMAADMQEAAIQATQVAQDAIRDNNLEKEIANAVKTAFTH
LYPSLWHCFVGRNFGCYVTHEHTKFIYLYIGQLGVCLFSTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001372Dynein_light_chain_typ-1/2
IPR037177DLC_sf