prot_H-paniculata_contig2558.6963.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2558.6963.1
Unique Nameprot_H-paniculata_contig2558.6963.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length76
Homology
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BLAST of mRNA_H-paniculata_contig2558.6963.1 vs. uniprot
Match: D7G0T2_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T2_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 1.230e-26
Identity = 58/115 (50.43%), Postives = 62/115 (53.91%), Query Frame = 0 
Query:    1 MGLGKTAVTLVLHLIHAPKTPAGNVPLDEKQWGPIMGNQ---------------------------------------EASRLCGGTLKIYPYHGGGRKRSPEFLAHHDIVVTTY 76
            MGLGKTA TL LHLIH PKTPA  VPLDEK+WGPI+G Q                                       EA RLCGG L IYPYHGG R++ P FLA  DIVVTTY
Sbjct:  636 MGLGKTAATLCLHLIHPPKTPAPGVPLDEKEWGPILGKQASPLTDRKSVTGEPEEPGKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGNRRKDPAFLAKFDIVVTTY 750
[Close]
BLAST of mRNA_H-paniculata_contig2558.6963.1 vs. uniprot
Match: A0A6H5KW09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW09_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 1.230e-26
Identity = 58/115 (50.43%), Postives = 62/115 (53.91%), Query Frame = 0 
Query:    1 MGLGKTAVTLVLHLIHAPKTPAGNVPLDEKQWGPIMGNQ---------------------------------------EASRLCGGTLKIYPYHGGGRKRSPEFLAHHDIVVTTY 76
            MGLGKTA TL LHLIH PKTPA  VPLDEK+WGPI+G Q                                       EA RLCGG L IYPYHGG R++ P FLA  DIVVTTY
Sbjct:  697 MGLGKTAATLCLHLIHPPKTPAPGVPLDEKEWGPILGKQASPLTDCKSVTGETEEPGKWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGNRRKDPAFLAKFDIVVTTY 811
[Close]
BLAST of mRNA_H-paniculata_contig2558.6963.1 vs. uniprot
Match: D7G0S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S9_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 4.270e-26
Identity = 56/116 (48.28%), Postives = 62/116 (53.45%), Query Frame = 0 
Query:    1 MGLGKTAVTLVLHLIHAPKTPAGNVPLDEKQWGPIMGNQ----------------------------------------EASRLCGGTLKIYPYHGGGRKRSPEFLAHHDIVVTTY 76
            MGLGKTA TL LHLIH P+TPA  VPLDEK+WGPI+G Q                                        EA RLCGG L IYPYHGGGR + P FL+  D+VVTTY
Sbjct:  665 MGLGKTAATLCLHLIHPPRTPAPGVPLDEKEWGPILGKQAEPLAYKKAQASVSPEAPGQWVSKGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRSKDPSFLSQFDMVVTTY 780
[Close]
BLAST of mRNA_H-paniculata_contig2558.6963.1 vs. uniprot
Match: D7G0T8_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T8_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 3.240e-11
Identity = 33/63 (52.38%), Postives = 39/63 (61.90%), Query Frame = 0 
Query:    1 MGLGKTAVTLVLHLIHAPKTPAGNVPLDEKQWGPIMGNQEASRLCGGTLKIYPYHGGGRKRSP 63
            MGLGKTA TL LHLIH P+TP+  VPLDEK+WGPI G Q        T  + P    G  ++P
Sbjct:  630 MGLGKTAATLALHLIHPPQTPSPGVPLDEKEWGPITGKQA-------TPMVAPKSTSGGTKAP 685
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2558.6963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G0T2_ECTSI1.230e-2650.43Helicase ATP-binding domain-containing protein n=1... [more]
A0A6H5KW09_9PHAE1.230e-2650.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0S9_ECTSI4.270e-2648.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0T8_ECTSI3.240e-1152.38Helicase ATP-binding domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.513

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2558contigH-paniculata_contig2558:13402..17505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2558.6963.1mRNA_H-paniculata_contig2558.6963.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2558 13402..17505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2558.6963.1 ID=prot_H-paniculata_contig2558.6963.1|Name=mRNA_H-paniculata_contig2558.6963.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp
MGLGKTAVTLVLHLIHAPKTPAGNVPLDEKQWGPIMGNQEASRLCGGTLK
IYPYHGGGRKRSPEFLAHHDIVVTTY
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