prot_H-paniculata_contig2556.6957.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2556.6957.1
Unique Nameprot_H-paniculata_contig2556.6957.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length199
Homology
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BLAST of mRNA_H-paniculata_contig2556.6957.1 vs. uniprot
Match: D7G7L4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7L4_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 3.040e-40
Identity = 74/121 (61.16%), Postives = 85/121 (70.25%), Query Frame = 0 
Query:    1 MMKRMRPEELSKLSKAAAEMEKRKLADKKKLAEFVSKTPELAGLVDDCYICTEPLLNNIGTSEFGVVSWHCRCTVAQKAHSACLFSKICH---GDDMCDMCSSPMRFASPRANRSGVMIQF 118
            +MK M+P EL K+SKAA  +EKRKL D KK+A FV+K      LV DCYIC EPLLNNIGT++FGVVSW CRCTV QKAHSAC+FSKICH       CDMC SPM F   R   +   I+F
Sbjct:   26 LMKHMKPAELRKISKAAMILEKRKLEDNKKVAAFVAKNDNFVELVGDCYICLEPLLNNIGTTKFGVVSWRCRCTVPQKAHSACVFSKICHVANSQGTCDMCDSPMMFEKTRRKGTQATIRF 146
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BLAST of mRNA_H-paniculata_contig2556.6957.1 vs. uniprot
Match: D7G7L3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L3_ECTSI)

HSP 1 Score: 141 bits (355), Expect = 2.830e-38
Identity = 71/136 (52.21%), Postives = 89/136 (65.44%), Query Frame = 0 
Query:    1 MMKRMRPEELSKLSKAAAEMEKRKLADKKKLAEFVSKTPELAGLVDDCYICTEPLLNNIGTSEFGVVSWHCRCTVAQKAHSACLFSKICH---GDDMCDMCSSPMRFASPRANRSGVMIQFLEAGDSRSGASRNAQ 133
            ++KRMRP+EL  + +AA  + KRK+ D+KK+A F  K      LV+DCYIC EPLLNNIGT++FGVVSW CRCTV QKAHS C+FSKICH   G   CDMC+SPM F       +  MI+F      +  A  N +
Sbjct:   31 LLKRMRPDELMAIGEAATALAKRKMDDRKKIAAFAEKHDNFVELVEDCYICLEPLLNNIGTTKFGVVSWKCRCTVPQKAHSRCVFSKICHATNGQGKCDMCNSPMEFEKTTRKGTHAMIRFHRDETDKDAAISNEE 166
[Close]
BLAST of mRNA_H-paniculata_contig2556.6957.1 vs. uniprot
Match: A0A6H5JF52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF52_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 2.870e-29
Identity = 58/107 (54.21%), Postives = 66/107 (61.68%), Query Frame = 0 
Query:   31 LAEFVSKTPELAGLVDDCYICTEPLLNNIGTSEFGVVSWHCRCTVAQKAHSACLFSKICH---GDDMCDMCSSPMRFASPRANRSGVMIQFLEAGDSRSGASRNAQD 134
            +A F  K      LV+DCYIC EPLLNNIGT++FGVVSW CRCTV QKAHS C+FSKICH   G   CDMC SPM F       +  MI+F      R    +NA D
Sbjct:   17 IAAFAEKHDNFVELVEDCYICLEPLLNNIGTTKFGVVSWRCRCTVPQKAHSRCVFSKICHASNGQGKCDMCKSPMEFEKTTRKGTHAMIRF-----HRDETDKNAAD 118
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2556.6957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G7L4_ECTSI3.040e-4061.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G7L3_ECTSI2.830e-3852.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF52_9PHAE2.870e-2954.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2556contigH-paniculata_contig2556:689..1285 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2556.6957.1mRNA_H-paniculata_contig2556.6957.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2556 640..3276 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2556.6957.1 ID=prot_H-paniculata_contig2556.6957.1|Name=mRNA_H-paniculata_contig2556.6957.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=199bp
MMKRMRPEELSKLSKAAAEMEKRKLADKKKLAEFVSKTPELAGLVDDCYI
CTEPLLNNIGTSEFGVVSWHCRCTVAQKAHSACLFSKICHGDDMCDMCSS
PMRFASPRANRSGVMIQFLEAGDSRSGASRNAQDQDQDQASELENYQQEE
IDNDDDDEEEEQEQEEQEQEEGGDEPQPPVLRRSLRITRRVGRVDSSD*
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