prot_H-paniculata_contig25148.6844.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25148.6844.1
Unique Nameprot_H-paniculata_contig25148.6844.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length127
Homology
BLAST of mRNA_H-paniculata_contig25148.6844.1 vs. uniprot
Match: A0A6H5KBT2_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT2_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 2.550e-24
Identity = 53/125 (42.40%), Postives = 78/125 (62.40%), Query Frame = 0
Query:    1 VSHKIRLGWLKFRNYNRVLYERSVAPLELKVRMLKVEVFEVMLYGCTTWSIEKVHYDEARTVHHRFLLRCIGEYRKR-MGNVMAYVGALERIGCEGIKTTIRQRKVLLLAGRVQRLEDMRGPKRM 124
            ++++ R  W   R Y R L++R  AP  LK+R+L+ E  E +LYGC TWS    HY   R++HHR LLR IG  RK+     ++Y   L+R+ C+ ++ TIRQ++ LL AG ++R  D R PKR+
Sbjct:  374 INYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLRAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQMLKRVECQRVEATIRQQR-LLFAGALERQSDGRLPKRL 497          
BLAST of mRNA_H-paniculata_contig25148.6844.1 vs. uniprot
Match: A0A6H5KPA7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPA7_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.070e-23
Identity = 53/125 (42.40%), Postives = 74/125 (59.20%), Query Frame = 0
Query:    1 VSHKIRLGWLKFRNYNRVLYERSVAPLELKVRMLKVEVFEVMLYGCTTWSIEKVHYDEARTVHHRFLLRCIGEYRKR-MGNVMAYVGALERIGCEGIKTTIRQRKVLLLAGRVQRLEDMRGPKRM 124
            + ++ R  W   R Y R L++R  AP  L +R+L+ E    +LYG  TWS    HY   R++HHR LLR IG+ RK+     ++Y   L+RIGC+  + TIRQR+ LL AG + R  D R PKR+
Sbjct:   95 IKYRSRGAWAWLRRYGRELFDRPKAPFRLNIRLLQAEAMGALLYGRMTWSPLSGHYQTLRSIHHRLLLRVIGDERKKDTYRQLSYAQTLKRIGCQSAEATIRQRR-LLFAGALARQPDGRLPKRL 218          
BLAST of mRNA_H-paniculata_contig25148.6844.1 vs. uniprot
Match: A0A6H5JLT1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT1_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 3.860e-23
Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = 0
Query:    1 VSHKIRLGWLKFRNYNRVLYERSVAPLELKVRMLKVEVFEVMLYGCTTWSIEKVHYDEARTVHHRFLLRCIG-EYRKRMGNVMAYVGALERIGCEGIKTTIRQRKVLLLAGRVQRLEDMRGPKRM 124
            ++ + R  W   R Y R L++R  AP  LK+R+L+ E  E +LYGC TWS    HY   R++HHR L R IG + +K     ++Y   LER+ C+ ++ TIRQR+ LL AG + R  D R PKR+
Sbjct:  358 INCRSRGAWACLRRYGRELFDRPKAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLFRVIGYKLKKDTYRQLSYPRTLERVECQSVEATIRQRR-LLFAGALARQPDGRLPKRL 481          
BLAST of mRNA_H-paniculata_contig25148.6844.1 vs. uniprot
Match: A0A6H5L760_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L760_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 9.520e-13
Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    1 VSHKIRLGWLKFRNYNRVLYERSVAPLELKVRMLKVEVFEVMLYGCTTWSIEKVHYDEARTVHHRFLLRCIGE 73
            ++++ +  W   R Y R L++R  AP  LK+R+L+ E  E +LYGC TWS    HY    ++HHR LLR IGE
Sbjct:  232 INYRSKGEWACLRRYGRELFDRPQAPFLLKIRLLQAEATEALLYGCMTWSPLSDHYQTLPSIHHRLLLRVIGE 304          
BLAST of mRNA_H-paniculata_contig25148.6844.1 vs. uniprot
Match: A2Q5Q3_MEDTR (Uncharacterized protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=A2Q5Q3_MEDTR)

HSP 1 Score: 50.8 bits (120), Expect = 1.080e-5
Identity = 25/76 (32.89%), Postives = 43/76 (56.58%), Query Frame = 0
Query:    1 VSHKIRLGWLKFRNYNRVLYERSVAPLELKVRMLKVEVFEVMLYGCTTWSIEKVHYDEARTVHHRFLLRCIGEYRK 76
            VSH+I++GWLK+R  + VL ++ V PL+LK +  +  V   +LYG   W+++  H ++        L    G+ R+
Sbjct:    7 VSHRIQVGWLKWRRASSVLCDKKV-PLKLKGKFYRTTVRPALLYGTECWAVKSQHENQISVAEMMMLRWMSGKTRQ 81          
BLAST of mRNA_H-paniculata_contig25148.6844.1 vs. uniprot
Match: A0A6A3C6V7_HIBSY (Proton gradient regulation 7 isoform 2 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3C6V7_HIBSY)

HSP 1 Score: 53.5 bits (127), Expect = 1.110e-5
Identity = 23/57 (40.35%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    1 VSHKIRLGWLKFRNYNRVLYERSVAPLELKVRMLKVEVFEVMLYGCTTWSIEKVHYD 57
            V+H+I++GWLK+R    +L +++V PL+LK +  ++ +  V+LYG   W+I+K H D
Sbjct:  878 VTHRIKMGWLKWRAVTGILCDKNV-PLKLKGKFYRMTIRPVLLYGSECWAIKKDHND 933          
BLAST of mRNA_H-paniculata_contig25148.6844.1 vs. uniprot
Match: A0A2G2ZSG7_CAPAN (Putative GTP-binding protein OBGM, mitochondrial n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A2G2ZSG7_CAPAN)

HSP 1 Score: 52.4 bits (124), Expect = 2.700e-5
Identity = 25/67 (37.31%), Postives = 39/67 (58.21%), Query Frame = 0
Query:    1 VSHKIRLGWLKFRNYNRVLYERSVAPLELKVRMLKVEVFEVMLYGCTTWSIEKVHYDEARTVHHRFL 67
            VSH+I +GW+K++  + VLY++ V P +LK +  KV V   ML+G   W I+  H  + +    R L
Sbjct:   49 VSHRIGVGWMKWKLASGVLYDKKVPP-KLKGKFYKVSVRSAMLHGAECWPIKNSHIQKLKVAEMRML 114          
BLAST of mRNA_H-paniculata_contig25148.6844.1 vs. uniprot
Match: A0A1D6PDR3_MAIZE (Retrovirus-related Pol polyprotein LINE-1 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6PDR3_MAIZE)

HSP 1 Score: 51.6 bits (122), Expect = 5.010e-5
Identity = 37/115 (32.17%), Postives = 55/115 (47.83%), Query Frame = 0
Query:    1 VSHKIRLGWLKFRNYNRVLYERSVAPLELKVRMLKVEVFEVMLYGCTTWSIEKVHYDEARTVHHRFLLRCIGEYRK-RMGNVMAYVGALERIGCEGIKTTIRQRKVLLLAGRVQR 114
            VSH+I+ GWLK+R    VLY+  V P +LK +  +  +   MLYG   W  ++ H  +      R L    G  R+ R+ N        ER+G   I+  + Q + L   G +QR
Sbjct:  481 VSHRIKAGWLKWRQAAGVLYDPWV-PHKLKGKFYRTTIRPAMLYGAECWPTKRRHVQQLSVAEMRMLRGICGHTRRDRVRND----DIRERVGVASIEEKLMQHR-LRWFGHIQR 589          
BLAST of mRNA_H-paniculata_contig25148.6844.1 vs. uniprot
Match: A0A6A3AB87_HIBSY (Mechanosensitive ion channel protein 2 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3AB87_HIBSY)

HSP 1 Score: 51.6 bits (122), Expect = 5.300e-5
Identity = 24/67 (35.82%), Postives = 40/67 (59.70%), Query Frame = 0
Query:    1 VSHKIRLGWLKFRNYNRVLYERSVAPLELKVRMLKVEVFEVMLYGCTTWSIEKVHYDEARTVHHRFL 67
            V+H+I++GWLK+R    VL ++ V PL++K +  ++E+   +LYG   W+I+K H         R L
Sbjct:  221 VTHRIKVGWLKWRAATGVLCDKKV-PLKIKGKFYRMEIRPELLYGSECWAIKKDHVRRTEAAEMRML 286          
BLAST of mRNA_H-paniculata_contig25148.6844.1 vs. uniprot
Match: UPI001035910A (disease resistance protein RPM1-like n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI001035910A)

HSP 1 Score: 51.2 bits (121), Expect = 7.060e-5
Identity = 28/77 (36.36%), Postives = 48/77 (62.34%), Query Frame = 0
Query:    1 VSHKIRLGWLKFRNYNRVLYERSVAPLELKVRMLKVEVFEVMLYGCTTWSIEKVHYDEARTVHHRFLLRCI-GEYRK 76
            V H+I+ GWLK+RN + VL ++ V P+ LK +  ++ +  VMLY    W+ +K H D+  ++   ++LR + G+ RK
Sbjct:  813 VVHRIKAGWLKWRNASGVLCDKRV-PIRLKGKFYRMAIRPVMLYETECWATKKQHVDKM-SIAEMWMLRWVCGKTRK 887          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25148.6844.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5KBT2_9PHAE2.550e-2442.40Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KPA7_9PHAE1.070e-2342.40Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLT1_9PHAE3.860e-2342.40Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L760_9PHAE9.520e-1343.84Reverse transcriptase domain-containing protein n=... [more]
A2Q5Q3_MEDTR1.080e-532.89Uncharacterized protein n=1 Tax=Medicago truncatul... [more]
A0A6A3C6V7_HIBSY1.110e-540.35Proton gradient regulation 7 isoform 2 n=1 Tax=Hib... [more]
A0A2G2ZSG7_CAPAN2.700e-537.31Putative GTP-binding protein OBGM, mitochondrial n... [more]
A0A1D6PDR3_MAIZE5.010e-532.17Retrovirus-related Pol polyprotein LINE-1 n=1 Tax=... [more]
A0A6A3AB87_HIBSY5.300e-535.82Mechanosensitive ion channel protein 2 n=1 Tax=Hib... [more]
UPI001035910A7.060e-536.36disease resistance protein RPM1-like n=1 Tax=Camel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25148contigH-paniculata_contig25148:1502..1882 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25148.6844.1mRNA_H-paniculata_contig25148.6844.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25148 1502..1882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25148.6844.1 ID=prot_H-paniculata_contig25148.6844.1|Name=mRNA_H-paniculata_contig25148.6844.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp
VSHKIRLGWLKFRNYNRVLYERSVAPLELKVRMLKVEVFEVMLYGCTTWS
IEKVHYDEARTVHHRFLLRCIGEYRKRMGNVMAYVGALERIGCEGIKTTI
RQRKVLLLAGRVQRLEDMRGPKRMAER
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