prot_H-paniculata_contig25136.6839.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig25136.6839.1
Unique Nameprot_H-paniculata_contig25136.6839.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length180
Homology
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BLAST of mRNA_H-paniculata_contig25136.6839.1 vs. uniprot
Match: D7FYX1_ECTSI (PCIF1_WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX1_ECTSI)

HSP 1 Score: 173 bits (438), Expect = 4.860e-47
Identity = 101/180 (56.11%), Postives = 119/180 (66.11%), Query Frame = 0 
Query:    1 QFSRKLKEGTGGDPILPAKAFFCPGLSAELTELGVPNAQARNLCCELGRASKAALKTLSKQLRVVRGAEGSSSXXXXSSGRGVTAKRSDETTFVLQLGKNRREEDSFWGGSGGEVGFCFFGPLLRVNSAHYLKMKELFRRTRVDIIATRSNASARGNGCKWLENFHDCLFACLMRYEALQ 180
            QFSRKLKEG GGDPILPA++FF PGL AEL  LGV  AQ+RNLCCELGRASK+ALKTL KQLR V    G ++     S R V A++ D  T+VLQLGKN+                      LR+NSAHY KMKELF R+RV+  A R ++S       W+ +FHDCLF+CLMRYEALQ
Sbjct:  127 QFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGV--VNGPAAAVSAPSKR-VAARKLDGNTYVLQLGKNK----------------------LRMNSAHYDKMKELFSRSRVEGAARRQSSSTEHPPPAWIGDFHDCLFSCLMRYEALQ 281
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BLAST of mRNA_H-paniculata_contig25136.6839.1 vs. uniprot
Match: A0A6H5LQ06_9PHAE (PCIF1_WW domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ06_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 1.600e-35
Identity = 85/180 (47.22%), Postives = 98/180 (54.44%), Query Frame = 0 
Query:    1 QFSRKLKEGTGGDPILPAKAFFCPGLSAELTELGVPNAQARNLCCELGRASKAALKTLSKQLRVVRGAEGSSSXXXXSSGRGVTAKRSDETTFVLQLGKNRREEDSFWGGSGGEVGFCFFGPLLRVNSAHYLKMKELFRRTRVDIIATRSNASARGNGCKWLENFHDCLFACLMRYEALQ 180
            QFSRKLKEG GGDPILPA++FF PGL AEL  LGV  AQ+RNLCCELGRASK+ALKTL KQ+                                             W              LLR+NSAHY KMKELF R+RV+  A   ++S       W+ +FHDCLF+CLMRYEALQ
Sbjct:  237 QFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQVAA---------------------------------------SMPVW--------------LLRMNSAHYDKMKELFSRSRVEGAARWQSSSTEHPPPAWIGDFHDCLFSCLMRYEALQ 363
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25136.6839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYX1_ECTSI4.860e-4756.11PCIF1_WW domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5LQ06_9PHAE1.600e-3547.22PCIF1_WW domain-containing protein n=2 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig25136contigH-paniculata_contig25136:775..3526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig25136.6839.1mRNA_H-paniculata_contig25136.6839.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig25136 775..3526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig25136.6839.1 ID=prot_H-paniculata_contig25136.6839.1|Name=mRNA_H-paniculata_contig25136.6839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=180bp
QFSRKLKEGTGGDPILPAKAFFCPGLSAELTELGVPNAQARNLCCELGRA
SKAALKTLSKQLRVVRGAEGSSSSSTSSSGRGVTAKRSDETTFVLQLGKN
RREEDSFWGGSGGEVGFCFFGPLLRVNSAHYLKMKELFRRTRVDIIATRS
NASARGNGCKWLENFHDCLFACLMRYEALQ
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