prot_H-paniculata_contig2496.6790.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2496.6790.1
Unique Nameprot_H-paniculata_contig2496.6790.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length493
Homology
BLAST of mRNA_H-paniculata_contig2496.6790.1 vs. uniprot
Match: UPI001BB20916 (PHD finger protein 21A-like isoform X1 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB20916)

HSP 1 Score: 63.9 bits (154), Expect = 3.380e-7
Identity = 22/59 (37.29%), Postives = 36/59 (61.02%), Query Frame = 0
Query:   11 ESECEVHRVVCLVCEEVGARVTCEECGFAFHLGCLEPPLASVPDDGWACRMCAVHRRSR 69
            + E + H  +C VC ++G  + C+ C   +HLGCL+PPL+SVP   W+C  C +  + +
Sbjct:  333 KQESDGHEDICAVCRQIGELLMCDTCNLVYHLGCLDPPLSSVPPGAWSCPQCKLKGKDK 391          
BLAST of mRNA_H-paniculata_contig2496.6790.1 vs. uniprot
Match: UPI0018ACCE54 (autoimmune regulator n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=UPI0018ACCE54)

HSP 1 Score: 63.9 bits (154), Expect = 3.450e-7
Identity = 29/81 (35.80%), Postives = 41/81 (50.62%), Query Frame = 0
Query:   21 CLVCEEVGARVTCEECGFAFHLGCLEPPLASVPDDGWACRMCAVHRRSRRRKSIVEIVAMEFPVARGGAPKKGPNCSMCLS 101
            C VC++ G  + C+ C  AFHLGCL PPL S+P   W C  C+ HR  R      E+V +         P+   N S+ ++
Sbjct:  273 CAVCKDGGELICCDGCPRAFHLGCLIPPLTSIPSGSWQCEWCSGHRVKR------ELVRLPLQALSAQTPQTNTNSSLSVT 347          
BLAST of mRNA_H-paniculata_contig2496.6790.1 vs. uniprot
Match: UPI001FB7DB8A (autoimmune regulator isoform X1 n=2 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB7DB8A)

HSP 1 Score: 63.9 bits (154), Expect = 3.470e-7
Identity = 24/54 (44.44%), Postives = 31/54 (57.41%), Query Frame = 0
Query:   21 CLVCEEVGARVTCEECGFAFHLGCLEPPLASVPDDGWACRMCAVHRRSRRRKSI 74
            C VC + G  + C+ C  AFHLGCL+PPL S+P   W C  C  HR  R +  +
Sbjct:  279 CTVCRDGGELICCDGCPRAFHLGCLDPPLTSIPSGSWQCEWCCGHRVKREKAQV 332          
BLAST of mRNA_H-paniculata_contig2496.6790.1 vs. uniprot
Match: A0A158QV74_MESCO (Uncharacterized protein (Fragment) n=3 Tax=Mesocestoides corti TaxID=53468 RepID=A0A158QV74_MESCO)

HSP 1 Score: 62.4 bits (150), Expect = 1.840e-6
Identity = 27/75 (36.00%), Postives = 38/75 (50.67%), Query Frame = 0
Query:    3 GKVMGWAYESECEVHRVVCLVCEEVGARVTCEECGFAFHLGCLEPPLASVPDDGWACRMCAVHRRSRRRKSIVEI 77
            G V G         H   C VC + G  + C+ C   FHL CL PPLA+VP+  W C +CA  + +  +K I ++
Sbjct:  457 GPVRGDILREGFTAHDDFCRVCRQSGEVLCCDNCPAVFHLSCLTPPLAAVPNTSWHCPLCATEQEAYGKKKIPKL 531          
BLAST of mRNA_H-paniculata_contig2496.6790.1 vs. uniprot
Match: UPI001885BB48 (autoimmune regulator n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885BB48)

HSP 1 Score: 60.8 bits (146), Expect = 1.940e-6
Identity = 32/100 (32.00%), Postives = 48/100 (48.00%), Query Frame = 0
Query:   21 CLVCEEVGARVTCEECGFAFHLGCLEPPLASVPDDGWACRMCAVHRRSRRRKSIVEIVAMEFPVARGGAPKKGPNCSMCLSRTGYVQCCQVCTAPFHPRC 120
            C VC++ G  + C+ C  AFHL CL+PPLASVP   W C+ C+      ++       A+++  + G     G + S CL           C+ P+H  C
Sbjct:  171 CAVCKDGGELICCDGCPRAFHLTCLDPPLASVPSGSWCCKDCSGTGHQVQKSQH----ALQWADSCGFCHLGGEDLSRCLQ----------CSQPYHHHC 256          
BLAST of mRNA_H-paniculata_contig2496.6790.1 vs. uniprot
Match: A0A667XCE8_9TELE (Bromodomain PHD finger transcription factor n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667XCE8_9TELE)

HSP 1 Score: 59.7 bits (143), Expect = 1.250e-5
Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 0
Query:   21 CLVCEEVGARVTCEECGFAFHLGCLEPPLASVPDDGWACRMCAVHR 66
            C VC  +G  + CE C   +HL C++PPLA VP+D W C +C  H+
Sbjct:  347 CRVCHRLGDLLCCETCSAVYHLECVKPPLAEVPEDEWQCEICVAHK 392          
BLAST of mRNA_H-paniculata_contig2496.6790.1 vs. uniprot
Match: UPI00117606CC (LOW QUALITY PROTEIN: nucleosome-remodeling factor subunit BPTF-like n=1 Tax=Myripristis murdjan TaxID=586833 RepID=UPI00117606CC)

HSP 1 Score: 59.7 bits (143), Expect = 1.280e-5
Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 0
Query:   21 CLVCEEVGARVTCEECGFAFHLGCLEPPLASVPDDGWACRMCAVHR 66
            C VC  +G  + CE C   +HL C++PPLA VP+D W C +C  H+
Sbjct:  354 CRVCHRLGDLLCCETCSAVYHLECVKPPLAEVPEDEWQCEICVAHK 399          
BLAST of mRNA_H-paniculata_contig2496.6790.1 vs. uniprot
Match: A0A0R3U458_MESCO (Uncharacterized protein n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3U458_MESCO)

HSP 1 Score: 59.3 bits (142), Expect = 1.470e-5
Identity = 27/84 (32.14%), Postives = 41/84 (48.81%), Query Frame = 0
Query:   11 ESECEVHRVVCLVCEEVGARVTCEECGFAFHLGCLEPPLASVPDDGWACRMCAVHRRSRRRKSIVEIVAMEFPVARGGAPKKGP 94
            + E + H+  C  C + G  + CE C  ++H+GCL+PPLA +P+  W C  C       R   I+     E P   GG  ++ P
Sbjct:  187 QGEKDEHQEFCSECRDGGDLICCENCPASYHIGCLDPPLAQIPEGVWLCPRCGCKPLKGRVSKILFWRWREPPKRAGGDARQPP 270          
BLAST of mRNA_H-paniculata_contig2496.6790.1 vs. uniprot
Match: A0A7S0H0E0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H0E0_9EUKA)

HSP 1 Score: 57.0 bits (136), Expect = 2.370e-5
Identity = 31/123 (25.20%), Postives = 52/123 (42.28%), Query Frame = 0
Query:   21 CLVCEEVGARVTCEE--CGFAFHLGCLEPPLASVPDDGWACRMCAVHRRSRRRKSIVEIVAMEFPVARGGAPKKGPNCSMCLSRTGYVQCCQVCTAPFHPRCMDKPRDSRDKQGYTCADCHSP 141
            C+VC++ G  + CE   C  +FHLGCL PPLA +P+  W C  C      ++   + ++  +                       G + CC  C+  +H +C+    D   +  + C  C +P
Sbjct:   53 CVVCKKKGLLLCCENYTCTKSFHLGCLNPPLAELPEGTWFCDEC----HDKQHDDVCDVCGLG----------------------GELLCCDRCSLAYHTKCVGL--DCPPEGHWECRRCKTP 147          
BLAST of mRNA_H-paniculata_contig2496.6790.1 vs. uniprot
Match: A0A8E0VH40_9TREM (Bromodomain PHD finger transcription factor n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0VH40_9TREM)

HSP 1 Score: 58.2 bits (139), Expect = 2.590e-5
Identity = 25/61 (40.98%), Postives = 32/61 (52.46%), Query Frame = 0
Query:    3 GKVMGWAYESECEVHRVVCLVCEEVGARVTCEECGFAFHLGCLEPPLASVPDDGWACRMCA 63
            G V G         H   C VC++ G  + C+ C   FHLGCL+PPL +VP   W C +CA
Sbjct:  488 GPVRGDQLRDGFLTHEDHCRVCQQSGEVLCCDGCTAVFHLGCLDPPLTTVPPANWVCPVCA 548          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2496.6790.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
UPI001BB209163.380e-737.29PHD finger protein 21A-like isoform X1 n=2 Tax=Lyt... [more]
UPI0018ACCE543.450e-735.80autoimmune regulator n=1 Tax=Kryptolebias marmorat... [more]
UPI001FB7DB8A3.470e-744.44autoimmune regulator isoform X1 n=2 Tax=Mugil ceph... [more]
A0A158QV74_MESCO1.840e-636.00Uncharacterized protein (Fragment) n=3 Tax=Mesoces... [more]
UPI001885BB481.940e-632.00autoimmune regulator n=1 Tax=Syngnathus acus TaxID... [more]
A0A667XCE8_9TELE1.250e-545.65Bromodomain PHD finger transcription factor n=1 Ta... [more]
UPI00117606CC1.280e-545.65LOW QUALITY PROTEIN: nucleosome-remodeling factor ... [more]
A0A0R3U458_MESCO1.470e-532.14Uncharacterized protein n=1 Tax=Mesocestoides cort... [more]
A0A7S0H0E0_9EUKA2.370e-525.20Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A8E0VH40_9TREM2.590e-540.98Bromodomain PHD finger transcription factor n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 439..480
e-value: 0.0017
score: 27.6
coord: 20..63
e-value: 1.2E-8
score: 44.7
coord: 95..139
e-value: 0.94
score: 18.0
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 421..488
e-value: 2.0E-7
score: 32.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 8..78
e-value: 1.7E-12
score: 48.8
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 21..63
e-value: 1.2E-7
score: 31.5
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 18..65
score: 9.445
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 21..62
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 94..142
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 440..482
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 16..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2496contigH-paniculata_contig2496:18771..20249 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2496.6790.1mRNA_H-paniculata_contig2496.6790.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2496 18719..20824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2496.6790.1 ID=prot_H-paniculata_contig2496.6790.1|Name=mRNA_H-paniculata_contig2496.6790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=493bp
MVGKVMGWAYESECEVHRVVCLVCEEVGARVTCEECGFAFHLGCLEPPLA
SVPDDGWACRMCAVHRRSRRRKSIVEIVAMEFPVARGGAPKKGPNCSMCL
SRTGYVQCCQVCTAPFHPRCMDKPRDSRDKQGYTCADCHSPPTFDPALPV
LIGRSSNSLAACNGDHHDCEAVPSVRAVETSKPKCQHRKRDESQSKKSPA
LAGNRAEGNPREPNKKMRSNLRKKTADSSASVTLVSVCTMETPKLEFQQR
KKAENQAPRPAALTANPSDSSDGEPNVQKRKKSRKATGRPSTPVAPVSVP
AVKTPKPECQQGKKEDRQSTKTAILAKNSADGSGTKPNEQKTRKTRRKET
VGSSTSVEPSKPTRKSPRNKKTAAPPASIVPGQASTPDGVASSTLSDLPK
ILPEKSATDGDDEGVRRSPPADKRQPSTRISARCAAGMACNLAGGKLNEC
GECRNSYHSRCLSRPRTRSASFVWRCDECRENDLSSKPSTVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD