prot_H-paniculata_contig1104.677.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1104.677.1
Unique Nameprot_H-paniculata_contig1104.677.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length124
Homology
BLAST of mRNA_H-paniculata_contig1104.677.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 89.7 bits (221), Expect = 1.910e-18
Identity = 46/85 (54.12%), Postives = 58/85 (68.24%), Query Frame = 0
Query:   26 LKGPESGRWCAAMEEEVEALVENGTWESEDSGRLPAGRKAIRTKWTFKGKLKEDGSVARYKARLVAQGFSQAVTHQYTPLDNSVI 110
            +KGPE+  W AAM++E+ +L ENGTW+  D   LP GRKA+  KW FK KL EDG+V RYKARLVAQGF+Q     Y  +   V+
Sbjct:    1 MKGPEAELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVV 82          
BLAST of mRNA_H-paniculata_contig1104.677.1 vs. uniprot
Match: A0A182GDL1_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GDL1_AEDAL)

HSP 1 Score: 84.3 bits (207), Expect = 4.100e-17
Identity = 50/109 (45.87%), Postives = 64/109 (58.72%), Query Frame = 0
Query:   16 KEEQKSAAEALKGPESGRWCAAMEEEVEALVENGTWESEDSGRLPAGRKAIRTKWTFKGKLKEDGSVARYKARLVAQGFSQAVTHQY----TPLDNSVIYNGLAGVIGR 120
            +EE  S  EA++  ES  W AAM+EE ++L+ENGTW   +   LPAGRKAI +KW FK K    G+V ++KARLVAQGFSQ     Y     P+        L  V G+
Sbjct:    6 EEEPSSYEEAVRSSESDLWKAAMQEEYDSLMENGTWVLAE---LPAGRKAIGSKWVFKKKEDSAGNVCKFKARLVAQGFSQQFGVDYDSVFAPVAAQTTLRTLLSVAGK 111          
BLAST of mRNA_H-paniculata_contig1104.677.1 vs. uniprot
Match: A0A286UCP3_9AGAM (Gag-Pol poly n=1 Tax=Pyrrhoderma noxium TaxID=2282107 RepID=A0A286UCP3_9AGAM)

HSP 1 Score: 85.5 bits (210), Expect = 6.600e-17
Identity = 42/79 (53.16%), Postives = 57/79 (72.15%), Query Frame = 0
Query:   18 EQKSAAEALKGPESGRWCAAMEEEVEALVENGTWESEDSGRLPAGRKAIRTKWTFKGKLKEDGSVARYKARLVAQGFSQ 96
            E ++  E LK P++ +W  A  EE++AL++NGTW +E+   LP GRKA+  +W FK K K DGS+ RYKARLVA+GFSQ
Sbjct:  802 EPRTWKEMLKRPDAAQWIQAAHEEIQALLQNGTWIAEE---LPQGRKAVGNRWVFKLKRKPDGSIERYKARLVAKGFSQ 877          
BLAST of mRNA_H-paniculata_contig1104.677.1 vs. uniprot
Match: A0A4S4M1D7_9APHY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4M1D7_9APHY)

HSP 1 Score: 84.7 bits (208), Expect = 1.240e-16
Identity = 41/89 (46.07%), Postives = 62/89 (69.66%), Query Frame = 0
Query:   14 VSKEEQKSAAEALKGPESGRWCAAMEEEVEALVENGTWESEDSGRLPAGRKAIRTKWTFKGKLKEDGSVARYKARLVAQGFSQAVTHQY 102
            V  +E ++ AEA++ P++ +W  A ++E+++ +ENGTWE     +LP GRKAI ++W F+ K   DGS+ RYKARLVAQGF+Q    +Y
Sbjct:  665 VKADEPRTFAEAMRRPDADKWYQAAQDEIKSHLENGTWEL---AQLPEGRKAIGSRWVFRIKYNADGSIERYKARLVAQGFAQRPGLEY 750          
BLAST of mRNA_H-paniculata_contig1104.677.1 vs. uniprot
Match: A0A2M4CK12_ANODA (Putative pol polyprotein (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CK12_ANODA)

HSP 1 Score: 84.3 bits (207), Expect = 1.650e-16
Identity = 46/94 (48.94%), Postives = 59/94 (62.77%), Query Frame = 0
Query:   17 EEQKSAAEALKGPESGRWCAAMEEEVEALVENGTWESEDSGRLPAGRKAIRTKWTFKGKLKEDGSVARYKARLVAQGFSQAVTHQYTPLDNSVI 110
            E+  + +EA++  ES  W AAM+EE+ AL  N TWE     RLP GRKA+  KWT+K K  E+G + RYKARLVAQG+SQ     Y  +   VI
Sbjct:  350 EQPHTYSEAIESTESTAWRAAMQEEINALQGNDTWELV---RLPLGRKAVGCKWTYKRKENENGEIVRYKARLVAQGYSQKFGQDYDEVFAPVI 440          
BLAST of mRNA_H-paniculata_contig1104.677.1 vs. uniprot
Match: A0A0J7K416_LASNI (Lectin receptor kinase n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K416_LASNI)

HSP 1 Score: 82.4 bits (202), Expect = 3.960e-16
Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 0
Query:   14 VSKEEQKSAAEALKGPESGRWCAAMEEEVEALVENGTWESEDSGRLPAGRKAIRTKWTFKGKLKEDGSVARYKARLVAQGFSQ 96
            V K E  S  EA+KGPE  +W  A+ EE++A+ +N TW    +  LP GR+ I  KW FK KL E+G+V RYKARLVA+G+SQ
Sbjct:  169 VEKGEPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKN--LPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQ 249          
BLAST of mRNA_H-paniculata_contig1104.677.1 vs. uniprot
Match: A0A0J7KM48_LASNI (Integrase catalytic domain-containing protein n=2 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KM48_LASNI)

HSP 1 Score: 82.4 bits (202), Expect = 7.710e-16
Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 0
Query:   14 VSKEEQKSAAEALKGPESGRWCAAMEEEVEALVENGTWESEDSGRLPAGRKAIRTKWTFKGKLKEDGSVARYKARLVAQGFSQ 96
            V K E  S  EA+KGPE  +W  A+ EE++A+ +N TW    +  LP GR+ I  KW FK KL E+G+V RYKARLVA+G+SQ
Sbjct:  544 VEKGEPVSYEEAIKGPEGEKWKEAINEELDAMEKNSTWTVVKN--LPKGRRPISAKWIFKKKLDEEGNVVRYKARLVARGYSQ 624          
BLAST of mRNA_H-paniculata_contig1104.677.1 vs. uniprot
Match: A0A2N9GE70_FAGSY (CCHC-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GE70_FAGSY)

HSP 1 Score: 82.4 bits (202), Expect = 7.880e-16
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 0
Query:    3 KVEGTGNIAGAVSKEEQKSAAEALKGPESGRWCAAMEEEVEALVENGTWESEDSGRLPAGRKAIRTKWTFKGKLKEDGSVARYKARLVAQGFSQAVTHQYTPL 105
            ++EG   +  +   EE ++  EAL    S +W  AM++E+E++  N  W+  D   LP GRKAIR KW  K K K DGS+ RYKARLVA+G++Q     ++P+
Sbjct:  544 EIEGEAFMVSSQDDEEPRTVQEALSSSVSDKWMKAMDDEMESMRTNQVWDLVD---LPPGRKAIRNKWVLKIKRKADGSIERYKARLVAKGYTQNYEKTFSPV 643          
BLAST of mRNA_H-paniculata_contig1104.677.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A)

HSP 1 Score: 77.8 bits (190), Expect = 1.090e-15
Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 0
Query:   24 EALKGPESGRWCAAMEEEVEALVENGTWESEDSGRLPAGRKAIRTKWTFKGKLKEDGSVARYKARLVAQGFSQAVTHQYTPLDNSVI 110
            EAL  P++ +W  AMEEE+E L  N TW   D    P GRK ++ KW FK KL +DG V RYKARLVA+G++Q     Y    + VI
Sbjct:   36 EALTSPDAEKWKLAMEEELENLKRNETW---DIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKETFSPVI 119          
BLAST of mRNA_H-paniculata_contig1104.677.1 vs. uniprot
Match: A0A6V7JMB6_9HYME (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7JMB6_9HYME)

HSP 1 Score: 78.2 bits (191), Expect = 1.440e-15
Identity = 42/96 (43.75%), Postives = 58/96 (60.42%), Query Frame = 0
Query:   15 SKEEQKSAAEALKGPESGRWCAAMEEEVEALVENGTWESEDSGRLPAGRKAIRTKWTFKGKLKEDGSVARYKARLVAQGFSQAVTHQYTPLDNSVI 110
            ++EE  S  EA+ GP++ +W  AM+EE+ +L+ N TW  +   +LP G+ A+  KW FK K   DG   RYKARLVAQGFSQ     Y  +   V+
Sbjct:   31 AQEEPISYEEAMDGPDAEKWRIAMDEELNSLMSNNTWSVQ---QLPKGKSAVGCKWVFKIKRHADGRPDRYKARLVAQGFSQKFGTDYNEVFAPVV 123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1104.677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A182GIT5_AEDAL1.910e-1854.12Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182GDL1_AEDAL4.100e-1745.87Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A286UCP3_9AGAM6.600e-1753.16Gag-Pol poly n=1 Tax=Pyrrhoderma noxium TaxID=2282... [more]
A0A4S4M1D7_9APHY1.240e-1646.07Integrase catalytic domain-containing protein (Fra... [more]
A0A2M4CK12_ANODA1.650e-1648.94Putative pol polyprotein (Fragment) n=1 Tax=Anophe... [more]
A0A0J7K416_LASNI3.960e-1651.81Lectin receptor kinase n=1 Tax=Lasius niger TaxID=... [more]
A0A0J7KM48_LASNI7.710e-1651.81Integrase catalytic domain-containing protein n=2 ... [more]
A0A2N9GE70_FAGSY7.880e-1641.75CCHC-type domain-containing protein n=1 Tax=Fagus ... [more]
UPI0015A81C6A1.090e-1548.28uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A6V7JMB6_9HYME1.440e-1543.75Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 59..109
e-value: 9.6E-10
score: 38.5
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 33..108
NoneNo IPR availablePANTHERPTHR11439:SF247coord: 33..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1104contigH-paniculata_contig1104:14675..17047 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1104.677.1mRNA_H-paniculata_contig1104.677.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1104 12770..17459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1104.677.1 ID=prot_H-paniculata_contig1104.677.1|Name=mRNA_H-paniculata_contig1104.677.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MVKVEGTGNIAGAVSKEEQKSAAEALKGPESGRWCAAMEEEVEALVENGT
WESEDSGRLPAGRKAIRTKWTFKGKLKEDGSVARYKARLVAQGFSQAVTH
QYTPLDNSVIYNGLAGVIGRYTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like