prot_H-paniculata_contig249.6763.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig249.6763.1
Unique Nameprot_H-paniculata_contig249.6763.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length229
Homology
BLAST of mRNA_H-paniculata_contig249.6763.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 1.390e-29
Identity = 88/240 (36.67%), Postives = 117/240 (48.75%), Query Frame = 0
Query:    1 QGLFTPTRVTQGMLNAMSYFQGTTDDVLEGLLGKICEAWVDDVAVSAAIWRESLEWLRMVLGRLMARGLHVAADKVQLFRREMH----TWPEGTLRVSCSGYYNIPTFREVDN----MHETQNV--MRTSLLDLAEVVAPLRKMLEYLLRGTHR-TRRVADKNTIAGKQWTGDHATAWEAATTRVSKAVPLNQPCSDRRVLVFPDASEGYWGSHITQVPPEDLSAVGEVEEMRHESLGFL 229
            +GLF PTRV Q +LNA  YFQ    ++L+GL    C  WVDD         + L  L  +L RL   G+  AA K   F  ++      +  G +         +   R  +     M   Q V  +RTSL  LAEV+ P+R +LE  +    R T+ +A    I  + WT     AW +A   V+ AV L+ P     VL+FPDASE +WGS +TQVP E+L     VE M HE L FL
Sbjct:  527 EGLFEPTRVPQDVLNATGYFQAVMTEILQGLN---CAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPNRAIKCEAWTAGMVEAWISAQDLVAHAVALSHPKDGFAVLMFPDASEEHWGSFLTQVPQEELERGVSVEHMTHEPLAFL 763          
BLAST of mRNA_H-paniculata_contig249.6763.1 vs. uniprot
Match: A0A6H5L1I2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1I2_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 1.190e-21
Identity = 72/205 (35.12%), Postives = 100/205 (48.78%), Query Frame = 0
Query:   26 DVLEGLLGKICEAWVDDVAVSAAIWRESLEWLRMVLGRLMARGLHVAADKVQLFRREMHTWPEGTLRVSCSGYYNIPTFREVDNMHETQNVMRTSLLDLAEVVAPLRKMLE-YLLRGTHRTRRVADKNTIAGKQWTGDHATAWEAATTRVSKAVPLNQPCSDRRVLVFPDASEGYWGSHITQVPPEDLSAVGEVEEMRHESLGFL 229
            D+L+GL    C  WVDDVA       + L  L  +L RL  +G+  AA K   F            ++ C G              +  N +RTSL  LAEVV PLR++LE ++     RT+R+A    I  + WT   A AW  A    + AV L++      VL+FPDAS+ +WG+ +TQV   +L     VE+M H+ L FL
Sbjct:  501 DILQGLS---CMVWVDDVAWWGIDETDLLNTLDEILRRLEDKGIFAAAHKCLFF----------DTKIKCCG--------------KAVNWLRTSLPRLAEVVEPLRRLLEEHMASAPRRTKRIASNRPIESEAWTAGMAEAWTLAQDLAAHAVALSE--GGFAVLMFPDASDEHWGTFLTQVQQGELERGVSVEDMTHKPLAFL 676          
BLAST of mRNA_H-paniculata_contig249.6763.1 vs. uniprot
Match: A0A6A4YZG8_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YZG8_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.190e-13
Identity = 73/241 (30.29%), Postives = 104/241 (43.15%), Query Frame = 0
Query:    2 GLFTPTRVTQGMLNAMSYFQGTTDDVLEGLLGKICEAWVDDVAVSAAIWRESLEWLRMVLGRLMARGLHVAADKVQLFRREMHTWP----EGT------LRVSCSGYYNIP-TFREVDNMHETQNVMRTSLLDLAEVVAPLRKMLE--YLLRGTHRTRRVADKNTIAGKQWTGDHATAWEAATTRVSKAVPLNQPCSDRRVLVFPDASEGYWGSHITQVPPEDLSAVGEVEEMRHESLGFL 229
            G+++ TRV QG  +++SY Q T  ++    L K   AW+DD+          L  L  VL     +GL +   K   +  E   W      GT       RV        P T  ++       N MR S+     +V PL +MLE  +   G  RT++ A    +    W+G H          +   V L  P   +R+ VF DASEG+WGS ITQVPP+ L     ++   H+ L FL
Sbjct:  632 GVYSSTRVMQGGSDSVSYCQSTVQEMFSEQLYKGLLAWLDDLLGYHRTREGLLGVLADVLAVCADKGLKLHPKKCSFYVTEAR-WCGRIISGTGVKHDPARVEALQQLPSPVTGADLQQYVCAINWMRMSIPGYNVLVQPLTEMLERVFAAGGGKRTKQAAAAVLLEDVGWSGVHDDCLAKTKAVLGNVVELCHPDPQQRLCVFADASEGHWGSVITQVPPDQLHRP--IDAQNHQPLMFL 869          
BLAST of mRNA_H-paniculata_contig249.6763.1 vs. uniprot
Match: A0A6A4YZY1_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YZY1_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 6.630e-13
Identity = 74/245 (30.20%), Postives = 111/245 (45.31%), Query Frame = 0
Query:    2 GLFTPTRVTQGMLNAMSYFQGTTDDVLEGLLGKICEAWVDDVAVSAAIWRESLEW--LRMVLGRLMARGLHVAADKVQLFRREMHTWPEGTLRVSCSGYYNIP-------------TFREVDNMHETQNVMRTSLLDLAEVVAPLRKMLE--YLLRGTHRTRRVADKNTIAGKQWTGDHATAWEAATTRVSKAVPLNQPCSDRRVLVFPDASEGYWGSHITQVPPEDLSAVGEVEEMRHESLGFL 229
            G+++ TRV QG  +++SY Q T  ++    L K   AW+DD+ +     RE L W  L  VL     +GL +   K   +  E   W  G + +S +G  + P             T  ++       N MR S+     +V PL ++LE  +   G  RT++ A    +A   W+  H          +   V L  P   +R+ VF DASEG+WGS ITQVPP+ L    + +   H+ L FL
Sbjct:  350 GVYSSTRVMQGGSDSVSYCQSTVQEMFSAQLYKGLLAWLDDL-LGYHRTREGL-WGVLEDVLAVCADKGLKLHPKKCSFYVTEAK-WC-GRI-ISGTGVKHDPARVEALQQLPPPVTGADLQQYVCAINWMRMSIPGYNVLVQPLTELLERVFAASGGKRTKQAAASVLLADVGWSDVHVECLAKTKAVLGNVVELCHPDPLQRICVFADASEGHWGSVITQVPPDQLQRPFDAQN--HQPLMFL 587          
BLAST of mRNA_H-paniculata_contig249.6763.1 vs. uniprot
Match: A0A6A4ZFF1_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZFF1_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 7.030e-13
Identity = 74/245 (30.20%), Postives = 111/245 (45.31%), Query Frame = 0
Query:    2 GLFTPTRVTQGMLNAMSYFQGTTDDVLEGLLGKICEAWVDDVAVSAAIWRESLEW--LRMVLGRLMARGLHVAADKVQLFRREMHTWPEGTLRVSCSGYYNIP-------------TFREVDNMHETQNVMRTSLLDLAEVVAPLRKMLE--YLLRGTHRTRRVADKNTIAGKQWTGDHATAWEAATTRVSKAVPLNQPCSDRRVLVFPDASEGYWGSHITQVPPEDLSAVGEVEEMRHESLGFL 229
            G+++ TRV QG  +++SY Q T  ++    L K   AW+DD+ +     RE L W  L  VL     +GL +   K   +  E   W  G + +S +G  + P             T  ++       N MR S+     +V PL ++LE  +   G  RT++ A    +A   W+  H          +   V L  P   +R+ VF DASEG+WGS ITQVPP+ L    + +   H+ L FL
Sbjct:  536 GVYSSTRVMQGGSDSVSYCQSTVQEMFSAQLYKGLLAWLDDL-LGYHRTREGL-WGVLEDVLAVCADKGLKLHPKKCSFYVTEAK-WC-GRI-ISGTGVKHDPARVEALQQLPPPVTGADLQQYVCAINWMRMSIPGYNVLVQPLTELLERVFAASGGKRTKQAAASVLLADVGWSDVHVECLAKTKAVLGNVVELCHPDPLQRICVFADASEGHWGSVITQVPPDQLQRPFDAQN--HQPLMFL 773          
BLAST of mRNA_H-paniculata_contig249.6763.1 vs. uniprot
Match: A0A485L4U4_9STRA (Aste57867_16160 protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A485L4U4_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 7.200e-13
Identity = 74/245 (30.20%), Postives = 111/245 (45.31%), Query Frame = 0
Query:    2 GLFTPTRVTQGMLNAMSYFQGTTDDVLEGLLGKICEAWVDDVAVSAAIWRESLEW--LRMVLGRLMARGLHVAADKVQLFRREMHTWPEGTLRVSCSGYYNIP-------------TFREVDNMHETQNVMRTSLLDLAEVVAPLRKMLE--YLLRGTHRTRRVADKNTIAGKQWTGDHATAWEAATTRVSKAVPLNQPCSDRRVLVFPDASEGYWGSHITQVPPEDLSAVGEVEEMRHESLGFL 229
            G+++ TRV QG  +++SY Q T  ++    L K   AW+DD+ +     RE L W  L  VL     +GL +   K   +  E   W  G + +S +G  + P             T  ++       N MR S+     +V PL ++LE  +   G  RT++ A    +A   W+  H          +   V L  P   +R+ VF DASEG+WGS ITQVPP+ L    + +   H+ L FL
Sbjct:  132 GVYSSTRVMQGGSDSVSYCQSTVQEMFSAQLYKGLLAWLDDL-LGYHRTREGL-WGVLEDVLAVCADKGLKLHPKKCSFYVTEAK-WC-GRI-ISGTGVKHDPARVEALQQLPPPVTGADLQQYVCAINWMRMSIPGYNVLVQPLTELLERVFAASGGKRTKQAAASVLLADVGWSDVHVECLAKTKAVLGNVVELCHPDPLQRICVFADASEGHWGSVITQVPPDQLQRPFDAQN--HQPLMFL 369          
BLAST of mRNA_H-paniculata_contig249.6763.1 vs. uniprot
Match: A0A7W1BZ22_9BACT (RNA-directed DNA polymerase (Fragment) n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7W1BZ22_9BACT)

HSP 1 Score: 71.6 bits (174), Expect = 9.220e-11
Identity = 62/214 (28.97%), Postives = 99/214 (46.26%), Query Frame = 0
Query:   12 GMLNAMSYFQGTTDDVLEGLLGKICEAWVDDVAVSAAIWRESLEWLRMVLGRLMARGLHVAADKVQLFRREMH----------TWPEGTLRVSCSGYY---NIPTFREVDNMHETQNVMRTSLLDLAEVVAPLRKMLEYLLRGTHRTRRVADKNTIAGKQWTGDHATAWEAATTRVSKAVPL-NQPCSDRRVLVFPDASEGYWGSHITQVPPED 211
            G+ NA + FQ T +DVL GL+GKIC  ++DD+ + +    + LE L  VL RL   G++V  DK QLFR+++             P+     +   +    ++P  R  + M    N  R  + +L+ + APL  + +             DK    G+       T  +A     + A+P+ N+P  D + +V  DAS    G+ ITQV  +D
Sbjct:  401 GLRNAPAAFQRTMNDVLVGLIGKICACYIDDICIFSVTIEQHLERLAQVLERLRRVGMYVNLDKCQLFRKQIKFLGHIVSADGVRPDPAKTTAIEHFPAPGDVPAVRRFNGM---VNYYRRFIPNLSAIAAPLNALTQK------------DKPWRWGEAEQKAFDTMKQALVHATTLALPVRNRP--DLQYVVTTDASMNGIGASITQVVRKD 597          
BLAST of mRNA_H-paniculata_contig249.6763.1 vs. uniprot
Match: A0A6G0XMH2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XMH2_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.740e-10
Identity = 62/231 (26.84%), Postives = 100/231 (43.29%), Query Frame = 0
Query:    1 QGLFTPTRVTQGMLNAMSYFQGTTDDVLEGLLGKICEAWVDDVAVSAAIWRESLEWLRMVLGRLMARGLHVAADKVQLFRREMHTWPEGTLRVSCSGYYNIPTFREVDNMHETQNVMRTSLLDLAEVVAPLRKMLE--YLLRGTHRTRRVADKNTIAGKQWTGDHATAWEAATTRVSKAVPLNQPCSDRRVLVFPDASEGYWGSHITQVPPEDLSAVGEVEEMRHESLGFL 229
            QG FTPTR+  G   +++Y + T  ++ + LL K    W+DD           L W R ++      G+     ++   R          L V  +G        ++       N + T +    EVV PL   L+  Y L G+ +T+    + T+    ++ D    +EA    ++ +V L  P   + V VFPDAS  +WGS ITQ+P E  +    +++  H  L FL
Sbjct:   63 QGCFTPTRIPTGGSGSVAYCESTVTNLFKTLLYKCLLIWIDD-----------LLWCRKLVS---GSGIRHDPSRIHALR---------DLPVPKTG-------ADLQQFMCAVNWLCTHIPRYNEVVNPLSTALQRVYTLSGS-KTKSKLSRFTLPESFFSRDELENFEAVKRHIADSVKLALPDPSKPVCVFPDASNKFWGSIITQIPMEKQNLP--LQDQEHAPLAFL 260          
BLAST of mRNA_H-paniculata_contig249.6763.1 vs. uniprot
Match: A0A6G0XLS1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XLS1_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 3.030e-10
Identity = 62/231 (26.84%), Postives = 100/231 (43.29%), Query Frame = 0
Query:    1 QGLFTPTRVTQGMLNAMSYFQGTTDDVLEGLLGKICEAWVDDVAVSAAIWRESLEWLRMVLGRLMARGLHVAADKVQLFRREMHTWPEGTLRVSCSGYYNIPTFREVDNMHETQNVMRTSLLDLAEVVAPLRKMLE--YLLRGTHRTRRVADKNTIAGKQWTGDHATAWEAATTRVSKAVPLNQPCSDRRVLVFPDASEGYWGSHITQVPPEDLSAVGEVEEMRHESLGFL 229
            QG FTPTR+  G   +++Y + T  ++ + LL K    W+DD           L W R ++      G+     ++   R          L V  +G        ++       N + T +    EVV PL   L+  Y L G+ +T+    + T+    ++ D    +EA    ++ +V L  P   + V VFPDAS  +WGS ITQ+P E  +    +++  H  L FL
Sbjct:   63 QGCFTPTRIPTGGSGSVAYCESTVTNLFKTLLYKCLLIWIDD-----------LLWCRKLVS---GSGIRHDPSRIHALR---------DLPVPKTG-------ADLQQFMCAVNWLCTHIPRYNEVVNPLSTALQRVYTLSGS-KTKSKLSRFTLPESFFSRDELENFEAVKRHIADSVKLALPDPSKPVCVFPDASNKFWGSIITQIPMEKQNLP--LQDQEHAPLAFL 260          
BLAST of mRNA_H-paniculata_contig249.6763.1 vs. uniprot
Match: A0A6H5K9E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E0_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.000e-9
Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = 0
Query:  103 TFREVDNMHETQNVMRTSLLDLAEVVAPLRKMLE-YLLRGTHRTRRVADKNTIAGKQWTGDHATAWEAATTRVSKAVPLNQPCSDRRVLVFPDAS 196
            T  E+  + +  N +RTSL  LAEVV PLR++LE ++     RT+R+A    I  + WT   A AW +A   V+ AV L+ P     VL+FPDAS
Sbjct:  811 TAGELMQVLQAVNWLRTSLPRLAEVVEPLRRLLEEHMASAPRRTKRIASNRAIKSEAWTAGMAKAWTSAQDLVAHAVALSHPKEGFAVLMFPDAS 905          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig249.6763.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5L028_9PHAE1.390e-2936.67CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L1I2_9PHAE1.190e-2135.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6A4YZG8_9STRA1.190e-1330.29Reverse transcriptase domain-containing protein n=... [more]
A0A6A4YZY1_9STRA6.630e-1330.20Reverse transcriptase domain-containing protein (F... [more]
A0A6A4ZFF1_9STRA7.030e-1330.20Reverse transcriptase domain-containing protein (F... [more]
A0A485L4U4_9STRA7.200e-1330.20Aste57867_16160 protein n=3 Tax=Aphanomyces TaxID=... [more]
A0A7W1BZ22_9BACT9.220e-1128.97RNA-directed DNA polymerase (Fragment) n=1 Tax=Pyr... [more]
A0A6G0XMH2_9STRA2.740e-1026.84Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6G0XLS1_9STRA3.030e-1026.84Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6H5K9E0_9PHAE1.000e-942.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 2..15
e-value: 4.7E-11
score: 44.4
NoneNo IPR availableGENE3D3.30.70.270coord: 16..84
e-value: 4.7E-11
score: 44.4
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig249contigH-paniculata_contig249:18927..19856 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig249.6763.1mRNA_H-paniculata_contig249.6763.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig249 18927..19856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig249.6763.1 ID=prot_H-paniculata_contig249.6763.1|Name=mRNA_H-paniculata_contig249.6763.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=229bp
QGLFTPTRVTQGMLNAMSYFQGTTDDVLEGLLGKICEAWVDDVAVSAAIW
RESLEWLRMVLGRLMARGLHVAADKVQLFRREMHTWPEGTLRVSCSGYYN
IPTFREVDNMHETQNVMRTSLLDLAEVVAPLRKMLEYLLRGTHRTRRVAD
KNTIAGKQWTGDHATAWEAATTRVSKAVPLNQPCSDRRVLVFPDASEGYW
GSHITQVPPEDLSAVGEVEEMRHESLGFL
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