mRNA_H-paniculata_contig248.6731.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig248.6731.1
Unique NamemRNA_H-paniculata_contig248.6731.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: D8LUA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA5_ECTSI)

HSP 1 Score: 451 bits (1159), Expect = 2.250e-158
Identity = 220/272 (80.88%), Postives = 241/272 (88.60%), Query Frame = 1
Query:    7 SLGGEALPALGHSSSTSKLRMRRTLMDSFNGTVRSAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSPDLKAIDRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKAPRMGKTGSSEDSAPGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPFGW 822
            SLGGE LPA   S S+  L+MRRTLMDS+N TVRSAPKIGFGT+GRPP+Q+GG EAPGPGAYQLKST+FVNPSS+IRSPPS+TMRGREKFGSPDLKAIDRTCQ+EPGPGHYK+ IVNPQE++APKYTFPKD G   RE   RAPGPG YN+  GVGKQVLSTKRSH+GVGFGTGNR DLLVQSTADVGPGEY++PG+TGE+Q+DSR  N  GAKFSKA RMGK GS ED APGPGNYRLPPGICG+G ASPY SAPAATLSGREKFGSPFGW
Sbjct:   17 SLGGEYLPAATKSKSSDILKMRRTLMDSYNETVRSAPKIGFGTAGRPPLQDGGAEAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQLEPGPGHYKLAIVNPQEENAPKYTFPKDAGAMIRENVVRAPGPGRYNLHPGVGKQVLSTKRSHNGVGFGTGNRPDLLVQSTADVGPGEYSIPGSTGERQVDSRRCNKSGAKFSKAVRMGKPGSLEDVAPGPGNYRLPPGICGQGAASPYPSAPAATLSGREKFGSPFGW 288          
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: A0A835YVV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVV8_9STRA)

HSP 1 Score: 247 bits (631), Expect = 2.310e-78
Identity = 134/272 (49.26%), Postives = 176/272 (64.71%), Query Frame = 1
Query:   61 LRMRRTLMDSFNGTVRSAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSPDLKAIDRTCQMEPGPGHYKIT-IVNPQEQHAPKYTFPKDIGPGAREKGHR--APGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKA---PRMGKTG------------SSEDSA--PGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPF 816
            ++M RT++DS+N TV  AP++GFGT+ RP + +GG++ PGPGAY +KST+F NP S  RSPP +++RGREKFGSPDLKA DR  QMEPGP  YKI  I   +++  P Y+FP+     +     R  +PGPG Y +P  VGKQVLSTKRSHSG  FGTG R  L+  ST D+GPG+Y +PG  G KQ+DSR   +  ++F+K    P++ K G            + +D A  PG G Y +P  +  R   S +RS P A +SGREKFGSPF
Sbjct:    1 MKMGRTVIDSYNATVPMAPRVGFGTADRPALLDGGDDVPGPGAYAIKSTMFKNPRSCFRSPPCFSIRGREKFGSPDLKACDRATQMEPGPAAYKIPHIAGSEQRQPPAYSFPRSSWAKSDAVTARDISPGPGTYALPAAVGKQVLSTKRSHSGPAFGTGGRPPLISVSTDDIGPGDYEIPGNLGTKQVDSRKTTHQASRFAKPGGPPKVKKGGHGAHPQTPAESHAEDDFAHVPGAGAYNIPSTLV-RNPCSMFRSPPVARMSGREKFGSPF 271          
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: A0A8J2SYT1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYT1_9STRA)

HSP 1 Score: 220 bits (561), Expect = 5.280e-68
Identity = 125/262 (47.71%), Postives = 170/262 (64.89%), Query Frame = 1
Query:   52 TSKLRMRRTLMDSFNGTVRSAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVN-PSSVIRSPPSYTMRGREKFGSPDLKAIDRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLL-VQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKAPRMGKTGSSE-----DSAPGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPF 816
            T  L +  +++DSFN T +++P   FG++ RP + +  E  PG GAY +K+TI  N P S I S P +++R REKFG P L+A+D     EPGPG Y    +NP + + PKY+FPK  G   ++K   +PGPG Y IP+ VG+QVLSTK +++G+GFG G R  LL VQ+  DVGPGEY +  +   KQ+DSR   +G  KFS++ R  KT S        + PGPG Y+LP G+CG G + P+R+AP A+LSGREKFGSPF
Sbjct:    2 TKSLGLDHSIIDSFNATKKTSPSYQFGSAIRPRLSDA-EPTPGAGAYSIKTTILGNVPDSRIVSTPQFSLRSREKFGDPMLRALDAGTASEPGPGWYTPKQINPNDDNPPKYSFPK--GHFIKDKARFSPGPGAYAIPSSVGRQVLSTKSNNNGMGFGQGERPPLLRVQN--DVGPGEYGVGISACRKQVDSRKKTSGFVKFSRSARD-KTSSMTMQDELQARPGPGTYQLPSGLCGSGSSYPFRAAPRASLSGREKFGSPF 257          
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: F0YJJ1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJJ1_AURAN)

HSP 1 Score: 189 bits (480), Expect = 1.980e-54
Identity = 105/221 (47.51%), Postives = 143/221 (64.71%), Query Frame = 1
Query:  118 KIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVN-PSSVIRSPPSYTMRGREKFGSPDLKAIDRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKAPRMGKTGSS----EDSAPGPGNYRLPPGICGRGVASPYR 765
            ++ FG++ RP + E  E  PG GAY +K+TI  N P S I S P +++R REKFG+P L+A+D     +PGPG Y    VNP++ +APKY+FPK  G   ++K   +PGPG Y IP+ VGKQVLSTK +++G+GFG G R  LL     DVGPGEY +  +  +KQ+DSR   +G  KFS+  R   T +S    E++ PGPG Y+LPPG+CG G + P R
Sbjct:   92 RVSFGSAIRPRLSEA-EPTPGAGAYSIKTTILGNVPDSKIHSAPQFSLRSREKFGNPMLRALDTETARQPGPGWYTPKQVNPKDDNAPKYSFPK--GHFIKDKARLSPGPGAYVIPSSVGKQVLSTKSNNNGMGFGQGERPPLLRVHN-DVGPGEYGVGISACKKQVDSRKKTSGFVKFSRCARDKATSTSAKDEEEALPGPGTYQLPPGLCGGGSSYPLR 308          
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: A0A8K1CPW0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPW0_PYTOL)

HSP 1 Score: 146 bits (368), Expect = 7.360e-39
Identity = 99/239 (41.42%), Postives = 131/239 (54.81%), Query Frame = 1
Query:  109 SAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSP-DLKAIDRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKAPR--MGKTGSSEDSAPGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPF 816
            +AP   FG+S RP     G ++PGPGAYQ+ S+I     S + + P+ ++ GREKFGS  D+K    T    PGPG Y  TIVNP+E+ APKY+  K     +  K  + PGPG Y  PT +G+ VLST++ +    F    R  L   STADVGPG+Y +  A   KQ  S   +     F    R  + KTG      PGP +Y+ P    G+ V S YR+AP  ++SGR KFGS F
Sbjct:   47 TAPTTVFGSSTRP-QTSSGSKSPGPGAYQIPSSIGKPILSTMNAAPACSISGREKFGSTSDMK----TAANSPGPGDYTSTIVNPRERSAPKYSLGKKWTQLSGMK--KFPGPGEYEAPTTIGRTVLSTQKQNPMPAFPRVERKPLAATSTADVGPGQYGVVVAAVGKQPLSTLTSAAAFSFGNEQRSKLAKTGVE---VPGPASYQ-PKSSVGKQVESTYRTAPKISMSGRTKFGSHF 274          
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: K3WN56_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WN56_GLOUD)

HSP 1 Score: 131 bits (329), Expect = 4.740e-33
Identity = 92/237 (38.82%), Postives = 127/237 (53.59%), Query Frame = 1
Query:  109 SAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSP-DLKAIDRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKAPRMGKTGSSEDSAPGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPF 816
            +AP   FG+S RP    G  ++PGPGAYQ+ S+I     S +   P+ ++ GREKFGS  D K    T    PGPG Y   IVNP+E+ AP+Y+  K  G  +  K  ++PGPG Y   T +G+  LST++S+    F    R  L   +T DVGPG+Y +  A   KQ  S   +     F    R   +  + D+ PGP +Y     + G+ V S YR+AP  ++SGR KFGS F
Sbjct:   51 TAPVTVFGSSTRPHTTSG-NKSPGPGAYQIPSSIGKPVLSTMMQAPACSISGREKFGSTGDAKLSGST----PGPGDYTSEIVNPRERAAPRYSLGKKWGNLSEMK--KSPGPGSYESSTTLGRTFLSTQKSNPMPAFTKVERKPLTSGNT-DVGPGQYAVVVAAVGKQPISTLSSAASYSFGTELRTKVSRGTVDAVPGPNSYPSKSSV-GKQVESTYRTAPKCSMSGRTKFGSHF 278          
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: A0A6G0XD37_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XD37_9STRA)

HSP 1 Score: 126 bits (317), Expect = 3.780e-31
Identity = 88/244 (36.07%), Postives = 121/244 (49.59%), Query Frame = 1
Query:  106 RSAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSPDLKAIDRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGV--GKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFS-----KAPRMGKTGSSEDSAPGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPF 816
            R+AP   FGTS RP     G ++PGPGAYQ+ +TI     S IRS P+ ++ GREKFGS     +  +C   PGPG Y   IVNP E++AP+++  K    G  +   ++PGPG Y+ P  +   + VLST +  +   F   NR                        KQ+ S   N+    FS     KAP   +   S D++P P  Y+    + G  V S Y+SAP  ++SGR KFGS F
Sbjct:   55 RTAPTTCFGTSSRPKDPGDGNKSPGPGAYQVPTTIGKPVVSTIRSAPACSISGREKFGSTSDLKLAASC---PGPGDYTPHIVNPNERNAPQFSLGKKWTKGIVDSSAKSPGPGAYDTPESLLNTRTVLSTSKHATASSFPKDNRXXXXXXXXXXXXXXXXXXXNVAVGKQVVSTVTNSAAYSFSVVGRSKAPVGARM--SHDASPAPNAYKHKDAV-GTQVLSTYKSAPKCSMSGRTKFGSHF 292          
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: W7T5U8_9STRA (Flagellar associated protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T5U8_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.400e-31
Identity = 85/210 (40.48%), Postives = 114/210 (54.29%), Query Frame = 1
Query:   79 LMDSFNGTVRSAPKIGFGTSGRPPM--QEGGEEAPGPGAYQLKSTIFVNPS-SVIRSPPSYTMRGREKFGSPDLKAIDRTCQMEPGPGHYKIT-------IVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNR-----SDLLVQSTADVG-PGEYTMPGATGEKQIDSRWWNNGGAKFSKA 660
            ++ S+ G   + P  GFG+S R  +     G + PGPGAY LKST+  + + S IRS   +++RGRE FGS  +   DR C  EPGPG Y  +       + NP+ + AP+++FPK   P  R K    PGPGHY+    +G QVLS++ S     FG G +     SDL    T+  G PG Y    A G KQ+DSR  N GG +F KA
Sbjct:   24 IITSYKGIFPATPSFGFGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGS-KIFTKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPKGCSP--RNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDLTSSGGGPGFYNAVSACG-KQVDSRKRNGGGVRFGKA 229          
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: F0WEQ1_9STRA (Uncharacterized protein AlNc14C76G5101 n=2 Tax=Albugo TaxID=65356 RepID=F0WEQ1_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.940e-31
Identity = 84/237 (35.44%), Postives = 118/237 (49.79%), Query Frame = 1
Query:  109 SAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSPDLKAID-RTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKAPRMGKTGSSEDSAPGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPF 816
            +AP   FG+S RP       ++PGPG+YQ+ ST+     S ++  PS ++ GR+KFGS    AID +     PGPG Y   +VN +EQ+APK++  K     A +   + PGPG Y     +G   LST++S+    F  G R+ L   +T DVGPG+Y +   +  KQ  S         F    R   + S      G G Y       G+   S Y S+P  ++SGR KFGS F
Sbjct:   44 TAPYTVFGSSPRP-KPSNDAKSPGPGSYQIPSTLGKAVLSTVQQAPSCSLSGRDKFGS----AIDVKNAASSPGPGDYTSKVVNLREQNAPKFSLGKKWNSSA-DSNKKGPGPGAYETANCIGPTFLSTQKSNPASAFPRGERTSLTQNNTPDVGPGQYGVVLTSVGKQTISTLSTPASFSFGTQERSKPSKSKALDNAGQGRYYSARSSVGKQSESIYPSSPGISMSGRTKFGSHF 274          
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Match: H3H517_PHYRM (Uncharacterized protein n=8 Tax=Peronosporaceae TaxID=4777 RepID=H3H517_PHYRM)

HSP 1 Score: 122 bits (307), Expect = 7.040e-30
Identity = 94/238 (39.50%), Postives = 123/238 (51.68%), Query Frame = 1
Query:  109 SAPKIGFGTSGRPPMQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSP-DLKAIDRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGHYNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGATGEKQIDSRWWNNGGAKFSKAPRMGKTG-SSEDSAPGPGNYRLPPGICGRGVASPYRSAPAATLSGREKFGSPF 816
            +AP   FG SG  P    G ++PGPGAYQ+ S+I     S +   PS ++ GREKFGS  DLK+  +     PGPG Y   IVNP+E+ AP Y+  K   P   +K            PT +G+ VLST++S+    F    R  L   STADVGPG+Y++      +Q  S   +     F    R  KTG S+ D  PGP  Y     + G  V S YR+AP  ++SGR KFGS F
Sbjct:   44 TAPVTVFG-SGTRPRTTSGAKSPGPGAYQIPSSIGKPVLSTMVQAPSCSISGREKFGSTADLKSSAKF----PGPGDYTTAIVNPRERAAPSYSLGKKWSPMTGQKXXXXXXXXE-TTPT-IGRTVLSTQKSNPMSSFPKVERKPLRNASTADVGPGQYSVVVEAVGRQAVSTLTSAAAYSFGTESRS-KTGRSTADGVPGPNMYDHKSSV-GWQVESTYRTAPKCSMSGRTKFGSHF 272          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig248.6731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LUA5_ECTSI2.250e-15880.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVV8_9STRA2.310e-7849.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2SYT1_9STRA5.280e-6847.71Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YJJ1_AURAN1.980e-5447.51Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8K1CPW0_PYTOL7.360e-3941.42Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WN56_GLOUD4.740e-3338.82Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A6G0XD37_9STRA3.780e-3136.07Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W7T5U8_9STRA4.400e-3140.48Flagellar associated protein n=1 Tax=Nannochlorops... [more]
F0WEQ1_9STRA4.940e-3135.44Uncharacterized protein AlNc14C76G5101 n=2 Tax=Alb... [more]
H3H517_PHYRM7.040e-3039.50Uncharacterized protein n=8 Tax=Peronosporaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig248contigH-paniculata_contig248:17243..21667 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score454.5
Seed ortholog evalue3.5e-125
Seed eggNOG ortholog2880.D8LUA5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Sperm-tail PG-rich repeat
EggNOG OGs2CN1A@1,2QT9S@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-14_004280.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size825
Cds size825
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig248.6731.1prot_H-paniculata_contig248.6731.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig248 17243..21667 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929723.4280992-CDS-H-paniculata_contig248:17242..173711622929723.4280992-CDS-H-paniculata_contig248:17242..17371Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 17243..17371 -
1691480983.2150252-CDS-H-paniculata_contig248:17242..173711691480983.2150252-CDS-H-paniculata_contig248:17242..17371Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 17243..17371 -
1622929723.4520986-CDS-H-paniculata_contig248:17976..180601622929723.4520986-CDS-H-paniculata_contig248:17976..18060Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 17977..18060 -
1691480983.2262123-CDS-H-paniculata_contig248:17976..180601691480983.2262123-CDS-H-paniculata_contig248:17976..18060Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 17977..18060 -
1622929723.4730783-CDS-H-paniculata_contig248:18489..186211622929723.4730783-CDS-H-paniculata_contig248:18489..18621Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 18490..18621 -
1691480983.2362633-CDS-H-paniculata_contig248:18489..186211691480983.2362633-CDS-H-paniculata_contig248:18489..18621Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 18490..18621 -
1622929723.4911404-CDS-H-paniculata_contig248:19106..192051622929723.4911404-CDS-H-paniculata_contig248:19106..19205Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 19107..19205 -
1691480983.2461903-CDS-H-paniculata_contig248:19106..192051691480983.2461903-CDS-H-paniculata_contig248:19106..19205Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 19107..19205 -
1622929723.5127833-CDS-H-paniculata_contig248:19520..196071622929723.5127833-CDS-H-paniculata_contig248:19520..19607Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 19521..19607 -
1691480983.2554922-CDS-H-paniculata_contig248:19520..196071691480983.2554922-CDS-H-paniculata_contig248:19520..19607Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 19521..19607 -
1622929723.5309849-CDS-H-paniculata_contig248:19986..200711622929723.5309849-CDS-H-paniculata_contig248:19986..20071Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 19987..20071 -
1691480983.2696605-CDS-H-paniculata_contig248:19986..200711691480983.2696605-CDS-H-paniculata_contig248:19986..20071Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 19987..20071 -
1622929723.544364-CDS-H-paniculata_contig248:21110..211991622929723.544364-CDS-H-paniculata_contig248:21110..21199Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 21111..21199 -
1691480983.2769334-CDS-H-paniculata_contig248:21110..211991691480983.2769334-CDS-H-paniculata_contig248:21110..21199Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 21111..21199 -
1622929723.5627449-CDS-H-paniculata_contig248:21547..216671622929723.5627449-CDS-H-paniculata_contig248:21547..21667Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 21548..21667 -
1691480983.284273-CDS-H-paniculata_contig248:21547..216671691480983.284273-CDS-H-paniculata_contig248:21547..21667Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig248 21548..21667 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig248.6731.1

>prot_H-paniculata_contig248.6731.1 ID=prot_H-paniculata_contig248.6731.1|Name=mRNA_H-paniculata_contig248.6731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp
ARSLGGEALPALGHSSSTSKLRMRRTLMDSFNGTVRSAPKIGFGTSGRPP
MQEGGEEAPGPGAYQLKSTIFVNPSSVIRSPPSYTMRGREKFGSPDLKAI
DRTCQMEPGPGHYKITIVNPQEQHAPKYTFPKDIGPGAREKGHRAPGPGH
YNIPTGVGKQVLSTKRSHSGVGFGTGNRSDLLVQSTADVGPGEYTMPGAT
GEKQIDSRWWNNGGAKFSKAPRMGKTGSSEDSAPGPGNYRLPPGICGRGV
ASPYRSAPAATLSGREKFGSPFGW*
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mRNA from alignment at H-paniculata_contig248:17243..21667-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig248.6731.1 ID=mRNA_H-paniculata_contig248.6731.1|Name=mRNA_H-paniculata_contig248.6731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4425bp|location=Sequence derived from alignment at H-paniculata_contig248:17243..21667- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGAGAAGCCTGGGAGGCGAAGCCTTGCCGGCGTTGGGGCACTCCTCGTC AACCAGCAAGCTGAGGATGAGGCGAACGCTAATGGATAGTTTCAACGGAA CTGTCAGGAGTGCACCTAAGGTGAACAATAGTTCACCAGGGTCAGCAAGC CACAGACCAGGTTCTGACCGTTGGGAGTCGATCGGTCGGGAATCGTGTAG TCATTTAACAAAGGCAAAATTGCCGGAAACGTTCTGGCGTGTGTCGATAC TAAATATTACGCGGAAGGGGTCGCTGTCAATTGCATCAATTCCTGTTTGA AGGTTTGAAGCATTCTAGCATTCTCGGGAAGCCGACCAACGATGACAACA AACGGCCCCTCGTCAAGCTTATTTTTCAAAAGAGTACCGCCTCGCGCTCA TTCTCCAATACACGATACAACTTCTCCTGCTTTACTTTCTCTTGCGTACA AATAATCCGGACACGCAGATTGGATTCGGTACTTCAGGACGTCCGCCAAT GCAGGAAGGAGGGGAGGAGGCTCCCGGACCGGGGGCGTATCAACTGAAGT CAACCATGTGCGTTTGTCATTTACAGCTACGCTCGTTGGTGTAGGACACT GTGAGGGGTTTAAATACCATTTGATTGACAGAGAGCATGTAATAGAGCCC GAGGGTTGTAGAGTTAAGCTTCGGCTATTCAAGAAAGGGTTATGTCATCA CAGCTAAATACGGGGGGAACGTCGCGTTAAAACGGAAACAAAACAGAGAT TGGAGATTATAAAAGGCCTTTTATTATTACACTAAGCGCAACATTCAACA CTCATAGGATATAAACCTTTATTGGTGCACAGTAGCTCAGAGAACCAGCT ACACGCACCGACGCACCGACCGATTCACAATAAAGCATGTGCCGCAGATA TTCTTCCCTCGACTGGGCAGTACTCGGCGCAGTGTGGGGTCTTGGGTAAC ACCTTGTCGGCTTCTTGGTTAAAGCCGACGTGGGGGTGCGTGATCCCACC CAATCCCCCCCCCCAATTTCACCAATAACTCCTCAATCAATACTTGACCG AACACCCACAAAATCCGCCTTCCCCAGAACACCCTTGAGGATAAGTTGTT CCCCCCCAGGCTTGACCGGCCAGAGAGACACACGAAAGGACCATATCCTG CAGTGGCACCTGTTCCAAGGTACTGGTAGTCACAGTTAAGCTGTAACGTC ACCAGTCAAAAATGTATCCGAAGGTCAGCCATCTACTGGTTGGTAGCTAC AAACCAACGCTTCTAAGGAATTATCCAGACTAAACATATACTTTTATAAG GACTATGGATCGGCCTGTCATCTCGCCTCTGAGTTCAATCACACGTTCAT GCAATCAGGATCACAGTTGGAGGTCAAATCCTTGATGCCGTGCCACCGTG TCTCGGCTATTTTCGAACTGTATGATACGTTCTCAAGACTACTTCAAGTT GTGATATTTCCCGTCATTTACGATAGGTACGCTATGAATGAAGCTAATTG TCACGTTTTGTTCTGGGGGCAAAAATACAATACCTCTGAACATATGAACG TCCCGACCGACCGTTGCTTCGGACACTGCTTATCTCCCTTAATCAGCTTT GTAAACCCTAGCAGCGTCATCCGTTCCCCGCCGAGCTACACGATGCGAGG GCGTGAGAAGTTCGGTTCGCCGGATCTTAAAGTGAGAAAAAGTGTAATTC GATGCCCGATGGGTTCGGTCAGCATAGTATTGTGAATCGACCTGGGTTGC AAACGAGATGTTTGGGCGTTCATCTAATGACCAGATCCGGGCAGTCTAGT GAACACAATTCCCGCATATGAACAGCAGCAGGCTGTTGGGGATACTTAAT TGTAAATACATCTTGGGCCATCCTCAAATTGAATGGGACAAATCAACATG CCGACAAAGGACTTGTGCCGATAAATGATCTTCGTCCGGCATAGCTTAAG AACGGAACGTGTGTTTTTGGGCAGAGTTTGAGGACGTAGTCCAAATCTTC CATGATACGTTGATACAGGGTTTGTAACCTTCCGTTTTCGCATATTATTT TTTTCGCCAGGCCATTGATCGAACATGTCAAATGGAGCCTGGACCAGGGC ACTACAAGATAACTATCGTAAATCCGCAGGAGCAACACGCCCCAAAGGTG AGACGTCATGTGCGACGTAGGCAAGAGGAAAGTCATGCAAGAAGTTGAGG GGTGGTATCGAGCGTACTGAACAAGTGCGCCTTTAATAATGGGTTTGCCC GAAATGGCAGTGTTAAATGAGTTCATTTTTTCTTGACAACCTGCCGGCGA AGACTGCTTTCACCCTATTAACGACCAATGCTCTAAGGATATCAGGGCAA AGCACTGAACGCGTAACGATATTTTTCACAATTCTTTTCTCCGTCTTAAT CTCCATCGAATGAGGTCTGAAAACAAACATCTCTGTTCTTACACTATAAT TGCTGCACCCAGTACACATTCCCGAAGGATATCGGCCCCGGTGCGAGGGA AAAGGGACACCGTGCGCCCGGACCAGGGCACTATAATATACCCACTGGCG TAGGAAAACAGGTACAGTGTATATTGCTTATATTCGCGTGTCAATGAGAG CATGATCCCTTTGTGCTTCTTAGGTGGCATGACCGCGCAGCTCCAAGCGT CATTTTGGAAGTCTTTGCGATCCTCTGTTCGCTCCGACACTATGATAGTA TTCATGCCGTTGCTTGTCAATCTAAAGCATCGCACAAGAAGTTAGACTGT TATGGTGACAAGGTCTAACACAACGTATATGTTGTTCGCACCCCCAAAGT GGATTTGTTCAACACTCGTTAAAGACTAAGTTAGAAGCTTTACATTATTC GAAAGCTTTTTAATGCCCCGATCAGAATATCAGGCCCAGCGGGTGCATAA AGTATTCAATCACACCTTCATCATGTTCAGCGAGAACGATAGGGTCTCTA AAGAACCAGGGGGGTAATTCGTTGAATCCTACACCTCTTCCTCTTCGTGA TGTCGGCTGAGTCCATTTTTCATTTGCCCTTGACTATCTTGGAAAGGTTC TGTCGACGAAGCGCAGCCACAGCGGGGTAGGTTTTGGAACGGGAAATCGT TCGGATCTATTGGTTCAAAGCACGGCAGACGTCGGTCCTGGCGAGTATAC CATGCCAGGAGCGACAGGCGAGAAGCAGGTACAGGAAGTGATGTAACGGA AAAATATTATCAAGCTTATTACGACTGCTTCTGCCTTTGTCCTCTTGCGC ATACGTGCTTGGCGTAAAGCCGACTTAGGAATTTGGTACGACCAATCAGT CCACCAAGAATGGTGTGGGCAAACGTCGGGAGTTCGACGGGAGCACAAAC TGGACCCATCTGGTGTGGAATCATGTGCTATGCTGTACTGCTATCCCTAG CTGAGCGACTCTAAACGTTGGCGAGTAGACTTCAAAGTTGCACGTCGGGC GAGAGTTGGCGAATGGGTTTGATCGTCTACTTCGAGTTCGTTCGTTTTCC AGCTCCACCCCGCCAGAACAACACATATGCTCTCTGCCGATTCAGTTCTA AGCATTCCAACGCATATGCAACTGTGCACGCTCTGCTATCTCGCTTGCTC TGTGAAGATTGACTCGAGATGGTGGAACAACGGCGGGGCGAAATTCTCGA AGGCGCCGAGAATGGGAAAAACCGGTAGCTCGGAAGACTCGGTAAGTGAG CACGGGAACCAAGGAAACGCGCCCAGAAAACGCGAAAGACTCGTGAACAT AATATGTAAAGCTGGTTCGAAGAGACTAGACCGCCATACAATGTATGCAC AAGGACACGATAACACTTTGGGTCAATATACTGCTGGAGAAATTTTGTGT ATATGTATGCGCTCACCGCTTTGTTGAGAACCTACACCGTCGTGAAGTGC AATGCACCTTGGTGTGTTATACCGTTTTTTTCTCGTTGATGAAAAACAAA CGATAGTTAAAACAAGCCTTGAGTAATGCTTGTTTTTATATGGTGTGCAA ATCCATCTATCAGCAAAGTTGATCATCAGGAAAACTGTAGGCACCTTTAC CCTGCTGTTGTTGAATCGCTCTACTTTATGACTCATCGAGTCTTCTCCCA GACATGTTTTCTCGCCAATAGCCACGGTCGCCGTTCGATATATCTCTCCT ATCCGCGCCCTCATTCATGCCTCTAGTATGTACCCCTTCCGGGGTACGTA CAAGTATTTCTAACAATGTTATGACCTACTCTTACTGACGCAGTGTGGTT TCACGAACCGCCTCTCCTTTTCGCCTTGCTATTGCGTGAAATCAAGGCTC CTGGGCCCGGTAACTATCGCTTGCCTCCCGGTATCTGCGGGAGAGGGGTG GCCTCACCATACCGTTCGGCTCCCGCTGCAACGCTAAGTGGACGCGAAAA ATTCGGCTCGCCTTTTGGCTGGTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig248:17243..21667-

>mRNA_H-paniculata_contig248.6731.1 ID=mRNA_H-paniculata_contig248.6731.1|Name=mRNA_H-paniculata_contig248.6731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at H-paniculata_contig248:17243..21667- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGAGAAGCCTGGGAGGCGAAGCCTTGCCGGCGTTGGGGCACTCCTCGTC
AACCAGCAAGCTGAGGATGAGGCGAACGCTAATGGATAGTTTCAACGGAA
CTGTCAGGAGTGCACCTAAGGCGAGAAGCCTGGGAGGCGAAGCCTTGCCG
GCGTTGGGGCACTCCTCGTCAACCAGCAAGCTGAGGATGAGGCGAACGCT
AATGGATAGTTTCAACGGAACTGTCAGGAGTGCACCTAAGATTGGATTCG
GTACTTCAGGACGTCCGCCAATGCAGGAAGGAGGGGAGGAGGCTCCCGGA
CCGGGGGCGTATCAACTGAAGTCAACCATATTGGATTCGGTACTTCAGGA
CGTCCGCCAATGCAGGAAGGAGGGGAGGAGGCTCCCGGACCGGGGGCGTA
TCAACTGAAGTCAACCATCTTTGTAAACCCTAGCAGCGTCATCCGTTCCC
CGCCGAGCTACACGATGCGAGGGCGTGAGAAGTTCGGTTCGCCGGATCTT
AAACTTTGTAAACCCTAGCAGCGTCATCCGTTCCCCGCCGAGCTACACGA
TGCGAGGGCGTGAGAAGTTCGGTTCGCCGGATCTTAAAGCCATTGATCGA
ACATGTCAAATGGAGCCTGGACCAGGGCACTACAAGATAACTATCGTAAA
TCCGCAGGAGCAACACGCCCCAAAGGCCATTGATCGAACATGTCAAATGG
AGCCTGGACCAGGGCACTACAAGATAACTATCGTAAATCCGCAGGAGCAA
CACGCCCCAAAGTACACATTCCCGAAGGATATCGGCCCCGGTGCGAGGGA
AAAGGGACACCGTGCGCCCGGACCAGGGCACTATAATATACCCACTGGCG
TAGGAAAACAGTACACATTCCCGAAGGATATCGGCCCCGGTGCGAGGGAA
AAGGGACACCGTGCGCCCGGACCAGGGCACTATAATATACCCACTGGCGT
AGGAAAACAGGTTCTGTCGACGAAGCGCAGCCACAGCGGGGTAGGTTTTG
GAACGGGAAATCGTTCGGATCTATTGGTTCAAAGCACGGCAGACGTCGGT
CCTGGCGAGTATACCATGCCAGGAGCGACAGGCGAGAAGCAGGTTCTGTC
GACGAAGCGCAGCCACAGCGGGGTAGGTTTTGGAACGGGAAATCGTTCGG
ATCTATTGGTTCAAAGCACGGCAGACGTCGGTCCTGGCGAGTATACCATG
CCAGGAGCGACAGGCGAGAAGCAGATTGACTCGAGATGGTGGAACAACGG
CGGGGCGAAATTCTCGAAGGCGCCGAGAATGGGAAAAACCGGTAGCTCGG
AAGACTCGATTGACTCGAGATGGTGGAACAACGGCGGGGCGAAATTCTCG
AAGGCGCCGAGAATGGGAAAAACCGGTAGCTCGGAAGACTCGGCTCCTGG
GCCCGGTAACTATCGCTTGCCTCCCGGTATCTGCGGGAGAGGGGTGGCCT
CACCATACCGTTCGGCTCCCGCTGCAACGCTAAGTGGACGCGAAAAATTC
GGCTCGCCTTTTGGCTGGTAAGCTCCTGGGCCCGGTAACTATCGCTTGCC
TCCCGGTATCTGCGGGAGAGGGGTGGCCTCACCATACCGTTCGGCTCCCG
CTGCAACGCTAAGTGGACGCGAAAAATTCGGCTCGCCTTTTGGCTGGTAA
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