mRNA_H-paniculata_contig24795.6729.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig24795.6729.1
Unique NamemRNA_H-paniculata_contig24795.6729.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig24795.6729.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 3.720e-79
Identity = 129/290 (44.48%), Postives = 187/290 (64.48%), Query Frame = 1
Query:  385 MSLIGSISFDFRTEIITYIGNIAAVAGGAVFIAGAGIGPKFVGVEFSSNRAHLGGGVYVTGSGNTITKYEFRD-PTTFDRCQFIDNTA-KVGGAVNSGTGHDVFNNTLFTRNSAGSGGALSLAGQASLENCTFVNNTAAEDEGPAISNMGHIATIRRASFAGNVFECEQGTFLDYSASGEIFVAVCKGFNTNCTECDYGPAEEIVPLCSPEPEHSKSDGGTRTIEMLKIDPGYWRAAKNIKRILPCYNTEACNGGLTGSAQYCQDGYEGPYCSVCGKDYTAGPGYTCNDC 1248
            ++L+G +S    TE   ++GN AAVAGGA+F++G  +GP FV +   SN A +GG + + GSG +    ++   PTTF++C+F  N A   GGAV++  G D F N++F  N+AG+GGAL LAG A + NC+FV N + +  G A+SN+G ++++   SF+ NV+ C++G FL+   SG ++ A+C G    C  C +    ++VP CS   EHS S GGT T++ L I+PGYWRA  + + +L CYN +AC GG+TGS  YC +GYEGPYC+VC   YTA  G  C+ C
Sbjct:  296 LALLGGLSVTIGTENTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVECEGCSF-EEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKC 584          
BLAST of mRNA_H-paniculata_contig24795.6729.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 5.840e-79
Identity = 137/313 (43.77%), Postives = 189/313 (60.38%), Query Frame = 1
Query:  319 SSLTIEGXXXXXXXXXXXXXXGMSLIGSISFDFRTEIITYIGNIAAVAGGAVFIAGAGIGPKFVGVEFSSNRAHLGGGVYVTGSGNTITKYEFR--DPTTFDRCQFIDNTAKV-GGAVNSGTGHDVFNNTLFTRNSAGSGGALSLAGQASLENCTFVNNTAAEDEGPAISNMGHIATIRRASFAGNVFECEQGTFLDYSASGEIFVAVCKGFNTNCTECDYGPAEEIVPLCSPEPEHSKSDGGTRTIEMLKIDPGYWRAAKNIKRILPCYNTEACNGGLTGSAQYCQDGYEGPYCSVCGKDYTAGPGYTCNDC 1248
            S+L + G               ++L+G ++ +  TE +++IGN A VAGGAVF++G G GP F G  F SN A +GG V   GSGN     +    +PTTFD C FIDN A   GGA++S  G D F N+ F  N AG+GG L LAG ASL+ C+FV+N + +  G A+SN+G + ++   +F+GNVF+C+ G +LDY+ASG  + A C G  T C  C + P   + P C+   EH  S GGT T+E L ++ GYWRA+ + + +  CYN++AC GG+TG A YC  GYEGPYC+VC   YT    + C  C
Sbjct:  553 STLVMNGTTAFVNNTCGANGGALALLGGLAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGNLKENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFFEPP--VPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRC 863          
BLAST of mRNA_H-paniculata_contig24795.6729.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 1.880e-78
Identity = 144/314 (45.86%), Postives = 193/314 (61.46%), Query Frame = 1
Query:  319 SSLTIEGXXXXXXXXXXXXXXGMSLIGSISFDFRTEIITYIGNIAAVAGGAVFIAGAGIGPKFVGVEFSSNRAHLGGGVYVTGSGNTITKYEFRD---PTTFDRCQFIDNTAKV-GGAVNSGTGHDVFNNTLFTRNSAGSGGALSLAGQASLENCTFVNNTAAEDEGPAISNMGHIATIRRASFAGNVFECEQGTFLDYSASGEIFVAVCKGFNTNCTECDYGPAEEIVPLCSPEPEHSKSDGGTRTIEMLKIDPGYWRAAKNIKRILPCYNTEACNGGLTGSAQYCQDGYEGPYCSVCGKDYTAGPGYTCNDC 1248
            S+L+I+G               ++L+G +S    T   +++ N A +AGGAV+++   IGP F  V F SN A +GG V   GSGN   K    D   PTTF RC+F  N A   GGAV+S +G D+F +T+F  N A +GGAL LAG+ASL NC+FV N + + EG A+SN+G I+ I   +F+GNVF C   TFL+Y+ SG+     C G  T C  C   P   +VPLCS    HS+SDGG  T+E L IDPGYWRA  +   +L CYN +AC GG+TG+ +YC +GYEGPYC++C  DY+A  G+TC+ C
Sbjct:  317 STLSIDGPTAFVNNTSGENGGALALLGGLSISVNTGETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNV--KGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYT-SGDALDEACSGCQTTCDGCVQPP---VVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKC 624          
BLAST of mRNA_H-paniculata_contig24795.6729.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 1.680e-74
Identity = 130/276 (47.10%), Postives = 178/276 (64.49%), Query Frame = 1
Query:  430 ITYIGNIAAVAGGAVFIAGAGIGPKFVGVEFSSNRAHLGGGVYVTGSGNT--ITKYEFRDPTTFDRCQFIDNTAKV-GGAVNSGTGHDVFNNTLFTRNSAGSGGALSLAGQASLENCTFVNNTAAEDEGPAISNMGHIATIRRASFAGNVFECEQGTFLDYSASGEIFVAVCKGFNTNCTECDYGPAEEIVPLCSPEPEHSKSDGGTRTIEMLKIDPGYWRAAKNIKRILPCYNTEACNGGLTGSAQYCQDGYEGPYCSVCGKDYTAGPGYTCNDC 1248
            + +  N AAVAGGAVF++GAG GP F    F+SN A +GG V V GSGN+  +   E  +PTTF+RC F+ N A   GGA++S  GHD F +T F  N+AG+GGAL LAG AS+ +C+FV N + ++ G A+SN+G + +    SF+ N F+C  GTFL Y+AS ++F AVC G  T C  C +     +VP C+   EHS S  G  T+E L I  GYWRA  +   +L CY+ +AC GG+TG++ YC +GYEGPYC++C + Y+A   +TC  C
Sbjct:  944 VRFTENAAAVAGGAVFVSGAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGVADIEPPNPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAGTGGALRLAGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQTACVGCAFADPL-LVPTCTDLLEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTC 1218          
BLAST of mRNA_H-paniculata_contig24795.6729.1 vs. uniprot
Match: A0A6H5KR67_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR67_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 2.900e-73
Identity = 137/323 (42.41%), Postives = 184/323 (56.97%), Query Frame = 1
Query:  319 SSLTIEGXXXXXXXXXXXXXXGMSLIGSISFDFRTEIITYIGNIAAVAGGAVFIAGAGIGPKFVGVEFSSNRAHLGGGVYVTGSGNTITKYEFRDPTTFDRCQFIDNT-AKVGGAVNSGTGHDVFNNTLFTRNSAGSGGALSLAGQASLENCTFVNNTAAEDEGPAISNMGHIATIRRASFAGNVFECEQGTFLDYSA------------SGEIFVAVCKGFNTNCTECDYGPAEEIVPLCSPEPEHSKSDGGTRTIEMLKIDPGYWRAAKNIKRILPCYNTEACNGGLTGSAQYCQDGYEGPYCSVCGKDYTAGPGYTCNDC 1248
            S+L+I+G               ++L+G +S    TE  +++ N A +AGG V+++   IGP F  V F SN AH+GG +                PTTF RC+F  N     GGAV+S +G D+F +T+F  N A +GGAL LAG+ASLENC+FV N + E EG A+SN+G I+ I   SF+GNVF C   TFL+Y+             SG+     C G    C  C   PA   VPLCS     S+SDGG  T+E L IDPGYW A  +   +L CYN +AC GG+TG+ +YC +GYEGPYC++C  DY+   G+TC+ C
Sbjct:  327 STLSIDGPTAFVNNTSGENGGALALLGELSISVNTEESSFVDNSADLAGGTVYVSDTAIGPTFSDVIFDSNFAHVGGALL---------------PTTFSRCRFTYNRETATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLENCSFVENLSDEGEGAAVSNVGIISEISNTSFSGNVFNCAPDTFLNYTVRDTMLTCSLSTMSGDPLDEACSGCQATCDGCAQPPA---VPLCSDVIPDSRSDGGLVTLETLLIDPGYWMATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSVQLGFTCSKC 631          
BLAST of mRNA_H-paniculata_contig24795.6729.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 3.600e-73
Identity = 150/321 (46.73%), Postives = 207/321 (64.49%), Query Frame = 1
Query:  298 SGSEGVVSSLTIEGXXXXXXXXXXXXXXGMSLI--GSISFDFRTEIITYIGNIAAVAGGAVFIAGAGIGPKFVGVEFSSNRAHLGGGVYVTGSGNTITKYEFRDPTTFDRCQFIDNT-AKVGGAVNSGTGHDVFNNTLFTRNSAGSGGALSLAGQASLENCTFVNNTAAEDEGPAISNMGHIATIRRASFAGNVFECEQGTFLDY-SASGEIFVAVCKGFNTNCTECDYGPAEEIVPLCSPEPEHSKSDGGTRTIEMLKIDPGYWRAAKNIKRILPCYNTEACNGGLTGSAQYCQDGYEGPYCSVCGKDYTAGPGYTCNDC 1248
            SG++G++S++T+  XXXXXXXXXXXXXX + L    +++  F  +I +++GN A VAGGA+F++G   GP F  V F+SN A +GG V + G G  I      +PTTFDRC+F+DN  A  GGA+ S  G D FN ++F  NSAG+GGAL LAG A   NC+FV NTA E EG A+SN+G+I+ +    F+GN F+C    +LD+   S + F  +C G    C  C +     +VP C+   EH+ SDGG  T+E L ID GYWRA ++ + +L CY+ EAC GG+T ++ YC +GYEGPYCSVC   Y+   G+ C+ C
Sbjct:  912 SGNDGILSNITMNAXXXXXXXXXXXXXXAIVLFEDAALNTSFNVDI-SFVGNSAGVAGGAIFLSGVDTGPIFTEVNFTSNVAEIGGAVSLFGCG--IEPSGGDNPTTFDRCRFVDNQGASTGGAIESAAGKDAFNGSIFEGNSAGTGGALRLAGAAYFFNCSFVGNTADEGEGAAVSNIGYISAVESNFFSGNRFDCRSSMYLDFIQQSDDPFEVMCSGCEVTCEGCVFDEGL-LVPACTEVMEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKC 1228          
BLAST of mRNA_H-paniculata_contig24795.6729.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 3.780e-72
Identity = 139/312 (44.55%), Postives = 174/312 (55.77%), Query Frame = 1
Query:  319 SSLTIEGXXXXXXXXXXXXXXGMSLIGSISFDFRTEIITYIGNIAAVAGGAVFIAGAGIGPKFVGVEFSSNRAHLGGGVYVTGSGNTITKYEFRDPTTFDRCQFIDNTAKV-GGAVNSGTGHDVFNNTLFTRNSAGSGGALSLAGQASLENCTFVNNTAAEDEGPAISNMGHIATIRRASFAGNVFECEQGTFLDYSASGE-IFVAVCKGFNTNCTECDYGPAEEIVPLCSPEPEHSKSDGGTRTIEMLKIDPGYWRAAKNIKRILPCYNTEACNGGLTGSAQYCQDGYEGPYCSVCGKDYTAGPGYTCNDC 1248
            SSL I G               ++L  + S D  T  +++ GN A  AGGAVF++GAGIGP F  V F SN A +GG   V GSGN         PT FDRC+FIDN A   GGAV+S  G D+  N++F  NSA  GGAL LAG             +   EG A+SN+G ++T+  +SF GN F C    FL+Y A+    F AVC G    C  C +      VP CS   +H  S GG  T+E L IDPGYWRA  + K ILPCYN +AC GG+TG+A YC + YEGPYCS+C   Y +  GY+C+ C
Sbjct:  724 SSLVINGTTTFFNNTCGENGGSLALFDACSLDINTADVSFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGNDRGMLSPIIPTKFDRCRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGTFEAVCDGCRVACDGCSFDEPP-AVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKC 1034          
BLAST of mRNA_H-paniculata_contig24795.6729.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 4.430e-70
Identity = 129/288 (44.79%), Postives = 175/288 (60.76%), Query Frame = 1
Query:  397 GSISFDFRTEIITYIGNIAAVAGGAVFIAGAGIGPKFVGVEFSSNRAHLGGGVYVTGSGNTITKYEFR---DPTTFDRCQFIDN-TAKVGGAVNSGTGHDVFNNTLFTRNSAGSGGALSLAGQASLENCTFVNNTAAEDEGPAISNMGHIATIRRASFAGNVFECEQGTFLDYSASGEIFVAVCKGFNTNCTECDYGPAEEIVPLCSPEPEHSKSDGGTRTIEMLKIDPGYWRAAKNIKRILPCYNTEACNGGLTGSAQYCQDGYEGPYCSVCGKDYTAGPGYTCNDC 1248
            G +  +F    + +  N AAVAGGAVF++GA +GP    V F +N A +GG V   GSGN + +Y      +PT F RC+F++N  A  GGAV +  G DVF + LF     G+GGAL LAG A+LENC+FV N + +  G A+SN+G I+ +   S+ GNVF C  G FLD++ASG+   A C G  T C +        +VP+C+   EH+ S GGT  I +L++D G+WRA      +LPCYN  AC  G+T S+  C DGYEGPYCS+C   YTAG  + C++C
Sbjct: 1388 GGLHVEFGAAGVVFSNNTAAVAGGAVFVSGADVGPVLSDVLFEANVAQVGGAVSTVGSGN-LKEYAGLAPPNPTIFTRCRFVNNQAAATGGAVETAAGQDVFVDCLFXXXXXGTGGALRLAGTATLENCSFVENVSEDGGGAAVSNIGSISKMDNISYRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGCFEEPPLVPICALAMEHTGSAGGTNNITLLRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSEC 1674          
BLAST of mRNA_H-paniculata_contig24795.6729.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 5.080e-70
Identity = 132/313 (42.17%), Postives = 177/313 (56.55%), Query Frame = 1
Query:  319 SSLTIEGXXXXXXXXXXXXXXGMSLIGSISFDFRTEIITYIGNIAAVAGGAVFIAGAGIGPKFVGVEFSSNRAHLGGGVYVTGSGNT--ITKYEFRDPTTFDRCQFIDNTAKV-GGAVNSGTGHDVFNNTLFTRNSAGSGGALSLAGQASLENCTFVNNTAAEDEGPAISNMGHIATIRRASFAGNVFECEQGTFLDYSASGEIFVAVCKGFNTNCTECDYGPAEEIVPLCSPEPEHSKSDGGTRTIEMLKIDPGYWRAAKNIKRILPCYNTEACNGGLTGSAQYCQDGYEGPYCSVCGKDYTAGPGYTCNDC 1248
            S+L I G              G++    +S D  T  +T+ GN A VAGGAVF++GAG+G  F               V + GSGN       E+  PTTFDRC F+ N A   GGA  S  G D F   +F  N AG+GGAL +AG AS+ENC+FV+N + + EG A+SN+G I+ +    F+ NVF+C  GTFLD +ASG+ F AVC G +  C  C +     + P CS    HS S GG  T++ + ID GYWRA    + +L C+  +AC GG+TG++ YC +GYEGPYCS+C   YT   G++C  C
Sbjct:  523 STLLINGPTAFVNNTCGGSGGGLAAFDGLSVDIDTAGVTFSGNAAEVAGGAVFVSGAGVGFVFXXXXXXXXXXXXXXAVSIVGSGNLKGFFDLEWPSPTTFDRCSFVGNQASATGGAFESAAGQDAFVGNVFVGNKAGTGGALRMAGTASVENCSFVDNVSDDGEGAALSNIGFISKMAHIYFSDNVFDCPSGTFLDLNASGDPFEAVCAGCDIVCDGCVFEQGL-VGPACSEVMAHSTSTGGNTTLQEVSIDRGYWRATSVSEEVLECFQADACLGGVTGTSGYCLEGYEGPYCSICSGGYTKQLGFSCTKC 834          
BLAST of mRNA_H-paniculata_contig24795.6729.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 2.270e-69
Identity = 132/294 (44.90%), Postives = 185/294 (62.93%), Query Frame = 1
Query:  382 GMSLIGSISFDFRTEI-ITYIGNIAAVAGGAVFIAGAGIGPKFVGVEFSSNRAHLGGGVYVTGSGNT--ITKYEFRDPTTFDRCQFIDNTAKV-GGAVNSGTGHDVFNNTLFTRNSAGSGGALSLAGQASLENCTFVNNTAAEDEGPAISNMGHIATIRRASFAGNVFECEQGTFLDYSASGEIFVAVCKGFNTNCTECDYGPAEEI-VPLCSPEPEHSKSDGGTRTIEMLKIDPGYWRAAKNIKRILPCYNTEACNGGLTGSAQYCQDGYEGPYCSVCGKDYTAGPGYTCNDC 1248
            GM+L G  +    TE+ I++I N AAV+GGAVF++ AG G  F    F SN A +GG V   GSG +  +   E  +PTTFDRC+F+ N A   GGA+++  G+D F +T F  N+AG+GGAL LAG AS+ NC+FV N + +  G A+SN+G +++  + +F+GN F+C  G FL Y+ S ++F  VC G  T      +  AE + VP+C    EHS S  G  T+E L I  GYWRA    + +L CY+ EAC GG+TG+A YC +GY+GPYC+VC   ++A  G+TC +C
Sbjct:  736 GMALYGGCALVIDTEMGISFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSGGSKGVEDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRLAGTASIINCSFVENYSNDGGGAAVSNIGIVSSAEKINFSGNGFDCPTGMFLAYNESDDLFETVCDGCQTXXXXXAF--AEPLLVPMCRDLLEHSTSPDGKLTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCREC 1027          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24795.6729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2Z8_ECTSI3.720e-7944.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G301_ECTSI5.840e-7943.77Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FHH1_ECTSI1.880e-7845.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LSC0_ECTSI1.680e-7447.10Polymorphic Outer membrane protein G/I family n=3 ... [more]
A0A6H5KR67_9PHAE2.900e-7342.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTI5_ECTSI3.600e-7346.73Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7G2X5_ECTSI3.780e-7244.55Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D7G5Y7_ECTSI4.430e-7044.79Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FTL7_ECTSI5.080e-7042.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LIY0_ECTSI2.270e-6944.90Polymorphic Outer membrane protein G/I family n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24795contigH-paniculata_contig24795:521..2769 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score271.9
Seed ortholog evalue4.8e-70
Seed eggNOG ortholog2880.D7G301
Hectar predicted targeting categoryother localisation
EggNOG OGs2BFIX@1,2S176@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1249
Cds size1248
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24795.6729.1prot_H-paniculata_contig24795.6729.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig24795 521..2768 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929723.1279178-CDS-H-paniculata_contig24795:520..14291622929723.1279178-CDS-H-paniculata_contig24795:520..1429Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24795 521..1429 +
1691480983.1280806-CDS-H-paniculata_contig24795:520..14291691480983.1280806-CDS-H-paniculata_contig24795:520..1429Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24795 521..1429 +
1622929723.162958-CDS-H-paniculata_contig24795:1874..21541622929723.162958-CDS-H-paniculata_contig24795:1874..2154Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24795 1875..2154 +
1691480983.1375418-CDS-H-paniculata_contig24795:1874..21541691480983.1375418-CDS-H-paniculata_contig24795:1874..2154Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24795 1875..2154 +
1622929723.185661-CDS-H-paniculata_contig24795:2709..27681622929723.185661-CDS-H-paniculata_contig24795:2709..2768Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24795 2710..2768 +
1691480983.145161-CDS-H-paniculata_contig24795:2709..27681691480983.145161-CDS-H-paniculata_contig24795:2709..2768Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24795 2710..2768 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig24795.6729.1

>prot_H-paniculata_contig24795.6729.1 ID=prot_H-paniculata_contig24795.6729.1|Name=mRNA_H-paniculata_contig24795.6729.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=416bp
NSAIYGGAILIGEDSTVSWEAGTSFSGNTAEGSGGALNAFDNCSVYWKAD
TSFSGNAANEFGGAVFIDHGCNLSWAAETSFLNNTAGGSGGAVYMSSLVS
GSEGVVSSLTIEGETTFLENSCGADGGGMSLIGSISFDFRTEIITYIGNI
AAVAGGAVFIAGAGIGPKFVGVEFSSNRAHLGGGVYVTGSGNTITKYEFR
DPTTFDRCQFIDNTAKVGGAVNSGTGHDVFNNTLFTRNSAGSGGALSLAG
QASLENCTFVNNTAAEDEGPAISNMGHIATIRRASFAGNVFECEQGTFLD
YSASGEIFVAVCKGFNTNCTECDYGPAEEIVPLCSPEPEHSKSDGGTRTI
EMLKIDPGYWRAAKNIKRILPCYNTEACNGGLTGSAQYCQDGYEGPYCSV
CGKDYTAGPGYTCNDC
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mRNA from alignment at H-paniculata_contig24795:521..2769+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig24795.6729.1 ID=mRNA_H-paniculata_contig24795.6729.1|Name=mRNA_H-paniculata_contig24795.6729.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2249bp|location=Sequence derived from alignment at H-paniculata_contig24795:521..2769+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACTCTGCCATCTACGGGGGTGCCATACTTATCGGCGAAGACTCCACGGT GTCGTGGGAGGCAGGGACATCGTTCTCTGGCAACACCGCGGAGGGTTCTG GGGGTGCCTTGAACGCTTTTGACAACTGTAGTGTATACTGGAAAGCGGAT ACGTCGTTCTCCGGCAATGCCGCAAATGAATTTGGCGGTGCTGTCTTTAT TGACCACGGCTGCAATTTGTCATGGGCAGCGGAAACGTCGTTCCTTAACA ACACCGCAGGCGGATCAGGCGGTGCTGTTTATATGTCGTCGTTAGTTTCG GGCAGCGAAGGTGTTGTTTCGTCTCTCACCATCGAAGGCGAGACAACATT CCTTGAGAACAGTTGTGGGGCCGACGGAGGTGGGATGTCACTGATCGGTT CGATATCCTTCGATTTCAGAACAGAAATAATCACGTATATCGGGAACATT GCCGCCGTCGCAGGAGGGGCGGTTTTCATAGCTGGGGCGGGGATTGGGCC GAAATTCGTTGGTGTGGAATTCAGTTCGAACCGGGCTCATCTTGGTGGCG GGGTGTACGTTACGGGTAGTGGGAACACCATAACTAAGTATGAATTCCGG GATCCAACCACGTTTGACCGATGCCAGTTTATCGACAACACGGCAAAAGT TGGCGGAGCGGTGAATAGCGGGACAGGGCATGATGTTTTCAACAATACGC TGTTCACGCGTAACAGTGCAGGGAGTGGAGGAGCTTTGAGCCTCGCTGGC CAGGCATCTCTCGAAAACTGCACATTTGTCAACAACACTGCGGCCGAGGA CGAGGGGCCGGCGATATCAAATATGGGCCACATCGCGACCATTCGCCGCG CTTCTTTTGCTGGCAACGTCTTCGAGTGCGAGCAAGGAACGTTTCTCGAT TACAGTGCGGTAGGTCTAAACCAATCTCGGTCATCACGCAACTTTGTTGT GTGATTGTCAGCTTCTAGCTCAATACGTTTTGGCTTTGATGGTCATTTGG ATAAGACGCAAATCGAACCTACAGTAATGGATGATCAACGGGCTTCATCG GATGAAAATGTTCGGTCGCTGATTCTGGGTGCTACCATATGCCCCAAGGC TACGTGCTACACTAGGTCAACGCAATTTGACTTTCACCGGCTAACAAGGG TGTAGTGAAGGGCCAAGTCTTGTTGCCATATCGTCGACACAACAGTGAAG CTTGACAGTATGTACCAACGACTGTATACACTTACCTGACTTCTCTTTAT CATTCGATACGTCGTTCGGACACATACACACGTAACTGTTGCAGTCTGAC CTAAACACACAATTCATGTCATTGTTTCCTCCCAAACGTGTTGCCACTCC ACAGTCGGGTGAAATCTTCGTTGCAGTCTGCAAAGGATTCAACACAAATT GCACGGAATGCGACTATGGCCCCGCAGAAGAAATCGTTCCTTTGTGTAGT CCGGAACCCGAGCATTCAAAGAGTGACGGTGGCACTCGTACCATAGAGAT GCTGAAGATTGACCCTGGTTACTGGCGAGCTGCAAAAAACATTAAAAGGA TTTTGCCGTGTTACAACACAGAAGCGTGCAATGGTGGATTGACAGGATCA GCTCAATACTGCCAAGATGGCTATGAAGGACCATGTGAGCATCTACTGTT TGAATCTGTTTGTAGTGGTTTGTTTTCCCTGCAGGATAGGCAGCATCCTC CAAACGAGTAGAAATTGTACTTATGGGCTCACCTGGTGGACAGAAGCAGC CCACTCCTGATATTCGGAGCCATGTAGTATACTAATGTGTTTGCTGAGTA TACGTGCTTTTGACTATTTCCGCTTGCGATATTGGTCCAATGCTACACTG TATTGTTGCCGCCTAGGGCTGTCTGTCACACGAGACCCTAAACCGTCCAC CCTGCTCGTGAGGCAAATACTGTTTGAAACGTGGTGCACACGCTGATTCG CTCATTCAACGGTACTTCGAAGCGCGTAGCCTATTTCAAGGCGCAACCAT TAGCGCGTGGAGAAAGCACACGTCAAATGGCCACTGCACTACTCTAGGAT TCGTTTCGGCGGAAAACCCAGACGAGGTTTCCAAGGGCTTGCTACCGCCT TTCCATCTACTTCGCCTGCAAGCACATTGAGTCAACAACCGCACTGATTA TCTTCTGTTGACGATGCTTTCGTTGTCCCTCATCCTCAGACTGCTCTGTT TGCGGAAAGGATTACACGGCGGGCCCAGGGTATACCTGCAACGACTGTT
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Coding sequence (CDS) from alignment at H-paniculata_contig24795:521..2769+

>mRNA_H-paniculata_contig24795.6729.1 ID=mRNA_H-paniculata_contig24795.6729.1|Name=mRNA_H-paniculata_contig24795.6729.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2496bp|location=Sequence derived from alignment at H-paniculata_contig24795:521..2769+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACTCTGCCATCTACGGGGGTGCCATACTTATCGGCGAAGACTCCACGGT
GTCGTGGGAGGCAGGGACATCGTTCTCTGGCAACACCGCGGAGGGTTCTG
GGGGTGCCTTGAACGCTTTTGACAACTGTAGTGTATACTGGAAAGCGGAT
ACGTCGTTCTCCGGCAATGCCGCAAATGAATTTGGCGGTGCTGTCTTTAT
TGACCACGGCTGCAATTTGTCATGGGCAGCGGAAACGTCGTTCCTTAACA
ACACCGCAGGCGGATCAGGCGGTGCTGTTTATATGTCGTCGTTAGTTTCG
GGCAGCGAAGGTGTTGTTTCGTCTCTCACCATCGAAGGCGAGACAACATT
CCTTGAGAACAGTTGTGGGGCCGACGGAGGTGGGATGTCACTGATCGGTT
CGATATCCTTCGATTTCAGAACAGAAATAATCACGTATATCGGGAACATT
GCCGCCGTCGCAGGAGGGGCGGTTTTCATAGCTGGGGCGGGGATTGGGCC
GAAATTCGTTGGTGTGGAATTCAGTTCGAACCGGGCTCATCTTGGTGGCG
GGGTGTACGTTACGGGTAGTGGGAACACCATAACTAAGTATGAATTCCGG
GATCCAACCACGTTTGACCGATGCCAGTTTATCGACAACACGGCAAAAGT
TGGCGGAGCGGTGAATAGCGGGACAGGGCATGATGTTTTCAACAATACGC
TGTTCACGCGTAACAGTGCAGGGAGTGGAGGAGCTTTGAGCCTCGCTGGC
CAGGCATCTCTCGAAAACTGCACATTTGTCAACAACACTGCGGCCGAGGA
CGAGGGGCCGGCGATATCAAATATGGGCCACATCGCGACCATTCGCCGCG
CTTCTTTTGCTGGCAACGTCTTCGAGTGCGAGCAAGGAACGTTTCTCGAT
TACAGTGCGAACTCTGCCATCTACGGGGGTGCCATACTTATCGGCGAAGA
CTCCACGGTGTCGTGGGAGGCAGGGACATCGTTCTCTGGCAACACCGCGG
AGGGTTCTGGGGGTGCCTTGAACGCTTTTGACAACTGTAGTGTATACTGG
AAAGCGGATACGTCGTTCTCCGGCAATGCCGCAAATGAATTTGGCGGTGC
TGTCTTTATTGACCACGGCTGCAATTTGTCATGGGCAGCGGAAACGTCGT
TCCTTAACAACACCGCAGGCGGATCAGGCGGTGCTGTTTATATGTCGTCG
TTAGTTTCGGGCAGCGAAGGTGTTGTTTCGTCTCTCACCATCGAAGGCGA
GACAACATTCCTTGAGAACAGTTGTGGGGCCGACGGAGGTGGGATGTCAC
TGATCGGTTCGATATCCTTCGATTTCAGAACAGAAATAATCACGTATATC
GGGAACATTGCCGCCGTCGCAGGAGGGGCGGTTTTCATAGCTGGGGCGGG
GATTGGGCCGAAATTCGTTGGTGTGGAATTCAGTTCGAACCGGGCTCATC
TTGGTGGCGGGGTGTACGTTACGGGTAGTGGGAACACCATAACTAAGTAT
GAATTCCGGGATCCAACCACGTTTGACCGATGCCAGTTTATCGACAACAC
GGCAAAAGTTGGCGGAGCGGTGAATAGCGGGACAGGGCATGATGTTTTCA
ACAATACGCTGTTCACGCGTAACAGTGCAGGGAGTGGAGGAGCTTTGAGC
CTCGCTGGCCAGGCATCTCTCGAAAACTGCACATTTGTCAACAACACTGC
GGCCGAGGACGAGGGGCCGGCGATATCAAATATGGGCCACATCGCGACCA
TTCGCCGCGCTTCTTTTGCTGGCAACGTCTTCGAGTGCGAGCAAGGAACG
TTTCTCGATTACAGTGCGTCGGGTGAAATCTTCGTTGCAGTCTGCAAAGG
ATTCAACACAAATTGCACGGAATGCGACTATGGCCCCGCAGAAGAAATCG
TTCCTTTGTGTAGTCCGGAACCCGAGCATTCAAAGAGTGACGGTGGCACT
CGTACCATAGAGATGCTGAAGATTGACCCTGGTTACTGGCGAGCTGCAAA
AAACATTAAAAGGATTTTGCCGTGTTACAACACAGAAGCGTGCAATGGTG
GATTGACAGGATCAGCTCAATACTGCCAAGATGGCTATGAAGGACCATTC
GGGTGAAATCTTCGTTGCAGTCTGCAAAGGATTCAACACAAATTGCACGG
AATGCGACTATGGCCCCGCAGAAGAAATCGTTCCTTTGTGTAGTCCGGAA
CCCGAGCATTCAAAGAGTGACGGTGGCACTCGTACCATAGAGATGCTGAA
GATTGACCCTGGTTACTGGCGAGCTGCAAAAAACATTAAAAGGATTTTGC
CGTGTTACAACACAGAAGCGTGCAATGGTGGATTGACAGGATCAGCTCAA
TACTGCCAAGATGGCTATGAAGGACCATACTGCTCTGTTTGCGGAAAGGA
TTACACGGCGGGCCCAGGGTATACCTGCAACGACTGTACTGCTCTGTTTG
CGGAAAGGATTACACGGCGGGCCCAGGGTATACCTGCAACGACTGT
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