prot_H-paniculata_contig2478.6726.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: A0A6H5JYA8_9PHAE (Sm domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYA8_9PHAE) HSP 1 Score: 159 bits (402), Expect = 2.550e-47 Identity = 76/83 (91.57%), Postives = 79/83 (95.18%), Query Frame = 0
Query: 73 APAQTGSTKKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 155
APAQTG K+SPSDFLKTVLGRPVVVKLNSGIDYRGVL CLDGYMNIAMEQTEEYVNGQLKA +GDCFIRGNNVLYISTQ+RR
Sbjct: 63 APAQTGGGKRSPSDFLKTVLGRPVVVKLNSGIDYRGVLVCLDGYMNIAMEQTEEYVNGQLKATFGDCFIRGNNVLYISTQRRR 145
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: A0A7S2ATC3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ATC3_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.450e-43 Identity = 76/93 (81.72%), Postives = 79/93 (84.95%), Query Frame = 0
Query: 64 TVAQAIAVAAPAQTGSTKK-SPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 155
T A A + A T S+KK PSDFLKTVLGRPVVVKLNSG DYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYIS +RR
Sbjct: 15 TAAPANSTPANTVTSSSKKCQPSDFLKTVLGRPVVVKLNSGTDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISASRRR 107
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: A0A7S2IZG2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IZG2_9EUKA) HSP 1 Score: 148 bits (373), Expect = 1.880e-43 Identity = 75/86 (87.21%), Postives = 78/86 (90.70%), Query Frame = 0
Query: 70 AVAAPAQTGSTKKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 155
A AAPA K +PSDFLKTVLGRPVVVKLNSG+DYRGVLACLDGYMNIAMEQTEEYV+GQLKAKYGD FIRGNNVLYISTQKRR
Sbjct: 23 APAAPA----AKSNPSDFLKTVLGRPVVVKLNSGVDYRGVLACLDGYMNIAMEQTEEYVDGQLKAKYGDTFIRGNNVLYISTQKRR 104
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: A0A836CMP0_9STRA (Sm domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMP0_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.720e-43 Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 0
Query: 75 AQTGSTKKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 155
A+ S KSPSDFLK VLGR V+VKLNSG+DYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYIST KRR
Sbjct: 37 AKAASKVKSPSDFLKGVLGRSVIVKLNSGVDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTTKRR 117
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: A0A7S2UQ42_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ42_9STRA) HSP 1 Score: 147 bits (370), Expect = 4.910e-43 Identity = 69/75 (92.00%), Postives = 73/75 (97.33%), Query Frame = 0
Query: 81 KKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 155
K+SPSDFLK+VLGRPV V+LNSG DYRGVLACLDGYMNIAMEQTEEYV+GQLKAKYGDCFIRGNNVLYISTQKRR
Sbjct: 28 KRSPSDFLKSVLGRPVSVRLNSGTDYRGVLACLDGYMNIAMEQTEEYVDGQLKAKYGDCFIRGNNVLYISTQKRR 102
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: V4A3S6_LOTGI (Sm domain-containing protein n=19 Tax=Protostomia TaxID=33317 RepID=V4A3S6_LOTGI) HSP 1 Score: 145 bits (365), Expect = 1.420e-42 Identity = 67/77 (87.01%), Postives = 73/77 (94.81%), Query Frame = 0
Query: 79 STKKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 155
S K++PSDFLK ++GRPVVVKLNSG+DYRGVLACLDGYMNIA+EQTEEYVNGQLK KYGD FIRGNNVLYISTQKRR
Sbjct: 2 SNKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRR 78
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: A0A251T2L1_HELAN (Putative U6 snRNA-associated Sm-like protein LSm6 n=11 Tax=Pentapetalae TaxID=1437201 RepID=A0A251T2L1_HELAN) HSP 1 Score: 144 bits (363), Expect = 4.460e-42 Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 0
Query: 71 VAAPAQTGSTKKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKR 154
VAA + ST K+PSDFLK++ GRPVVVKLNSG+DYRG+LACLDGYMNIAMEQTEEYVNGQLK KYGD FIRGNNVLYIST KR
Sbjct: 5 VAAAEKGSSTTKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIRGNNVLYISTSKR 88
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: LSM6_HUMAN (U6 snRNA-associated Sm-like protein LSm6 n=406 Tax=Sarcopterygii TaxID=8287 RepID=LSM6_HUMAN) HSP 1 Score: 143 bits (361), Expect = 5.930e-42 Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = 0
Query: 81 KKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 155
K++PSDFLK ++GRPVVVKLNSG+DYRGVLACLDGYMNIA+EQTEEYVNGQLK KYGD FIRGNNVLYISTQKRR
Sbjct: 5 KQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRR 79
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: K4FT18_CALMI (U6 snRNA-associated Sm-like protein LSm6 n=12 Tax=Vertebrata TaxID=7742 RepID=K4FT18_CALMI) HSP 1 Score: 143 bits (361), Expect = 5.930e-42 Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = 0
Query: 81 KKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 155
K++PSDFLK ++GRPVVVKLNSG+DYRGVLACLDGYMNIA+EQTEEYVNGQLK KYGD FIRGNNVLYISTQKRR
Sbjct: 5 KQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRR 79
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Match: UPI0003C16199 (U6 snRNA-associated Sm-like protein LSm6 isoform X3 n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0003C16199) HSP 1 Score: 143 bits (361), Expect = 6.290e-42 Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = 0
Query: 81 KKSPSDFLKTVLGRPVVVKLNSGIDYRGVLACLDGYMNIAMEQTEEYVNGQLKAKYGDCFIRGNNVLYISTQKRR 155
K++PSDFLK ++GRPVVVKLNSG+DYRGVLACLDGYMNIA+EQTEEYVNGQLK KYGD FIRGNNVLYISTQKRR
Sbjct: 7 KQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFIRGNNVLYISTQKRR 81 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2478.6726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig2478.6726.1 ID=prot_H-paniculata_contig2478.6726.1|Name=mRNA_H-paniculata_contig2478.6726.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=156bpback to top |