prot_H-paniculata_contig2478.6725.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2478.6725.1
Unique Nameprot_H-paniculata_contig2478.6725.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length58
Homology
BLAST of mRNA_H-paniculata_contig2478.6725.1 vs. uniprot
Match: D7G3Y7_ECTSI (Bardet-Biedl syndrome 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y7_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 3.470e-18
Identity = 37/55 (67.27%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 MQFMDLSRNGDFKLVAACKSQQLKVYQGTSLFAEHALLEEPCGLCFFHGKGDDST 55
            MQFMDLSRNGD+K+V AC++  LKVYQGTS+FAEH LL+EP GLC F+G  D++ 
Sbjct:   42 MQFMDLSRNGDYKIVVACRAMSLKVYQGTSIFAEHPLLDEPSGLCAFYGVEDNTN 96          
BLAST of mRNA_H-paniculata_contig2478.6725.1 vs. uniprot
Match: A0A3F2RIQ2_9STRA (BBS1 domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RIQ2_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.200e-6
Identity = 25/57 (43.86%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    1 MQFMDLSRNGDFKLVAACKSQQLKVYQGTSLFAEHALLEEPCGLCFFHGKGDDSTRP 57
            MQ +D+  +GD KL+ A   Q+LK+Y+G+SL  E A+L  P  LC+F+    D+ RP
Sbjct:   48 MQLVDVYGDGDAKLIVADGDQRLKMYKGSSLHGEQAILGVPSALCYFYS---DNNRP 101          
BLAST of mRNA_H-paniculata_contig2478.6725.1 vs. uniprot
Match: A0A7S4FYB0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FYB0_9EUGL)

HSP 1 Score: 51.2 bits (121), Expect = 5.650e-6
Identity = 23/58 (39.66%), Postives = 38/58 (65.52%), Query Frame = 0
Query:    1 MQFMDLSRNGDFKLVAACKSQQLKVYQGTSLFAEHALLEEPCGLCFFHGKGDDSTRPP 58
            ++  D++ +G+ KL+ A  ++QLKVY GT L AE+ALL+ P  +C F+   +D+   P
Sbjct:   68 IELADITGDGNHKLLIADANKQLKVYSGTDLVAENALLDVPSAICCFYMTYNDAVHRP 125          
BLAST of mRNA_H-paniculata_contig2478.6725.1 vs. uniprot
Match: L1JFP4_GUITC (BBS1 domain-containing protein (Fragment) n=3 Tax=Geminigeraceae TaxID=589343 RepID=L1JFP4_GUITC)

HSP 1 Score: 49.7 bits (117), Expect = 1.970e-5
Identity = 24/61 (39.34%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    1 MQFMDLSRNGDFKLVAACKSQQLKVYQGTSLFAEHALLEEPCGLCFFHGK---GDDSTRPP 58
            ++ +D++ NGD KL+ A ++Q+L+VY+G +L +E ALL+ P  +C F+ +   G  S R P
Sbjct:   19 LRLVDVTGNGDPKLIVADQNQKLRVYKGINLISELALLDTPSAICPFYAEQKAGGGSERIP 79          
BLAST of mRNA_H-paniculata_contig2478.6725.1 vs. uniprot
Match: A0A2D4BFR3_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFR3_PYTIN)

HSP 1 Score: 49.7 bits (117), Expect = 2.000e-5
Identity = 24/57 (42.11%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    1 MQFMDLSRNGDFKLVAACKSQQLKVYQGTSLFAEHALLEEPCGLCFFHGKGDDSTRP 57
            M  +D+  +GD KL+ A   ++LK+Y+G+SLFAE A+L  P  L +F+    D+ RP
Sbjct:  814 MALVDVYGDGDSKLIVADADRRLKMYKGSSLFAEQAILGTPSALSYFYS---DTARP 867          
BLAST of mRNA_H-paniculata_contig2478.6725.1 vs. uniprot
Match: A0A024TEN6_9STRA (BBS1 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEN6_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 2.710e-5
Identity = 24/57 (42.11%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    1 MQFMDLSRNGDFKLVAACKSQQLKVYQGTSLFAEHALLEEPCGLCFFHGKGDDSTRP 57
            +Q  D+  +GD KL+ A   ++LK+Y+G++L +E ALL  P  LC F+    +STRP
Sbjct:   53 VQLADVYGDGDSKLIVADSDRRLKLYKGSTLMSEQALLGVPVALCAFYS---ESTRP 106          
BLAST of mRNA_H-paniculata_contig2478.6725.1 vs. uniprot
Match: A0A1V9ZTA5_9STRA (Bardet-Biedl syndrome 1 family protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTA5_9STRA)

HSP 1 Score: 48.5 bits (114), Expect = 5.070e-5
Identity = 22/57 (38.60%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    1 MQFMDLSRNGDFKLVAACKSQQLKVYQGTSLFAEHALLEEPCGLCFFHGKGDDSTRP 57
            ++  D+  +GD+KL+ A   ++LK+Y+G++L +E A+L  P  LC F+    DS RP
Sbjct:   57 IKLADVYGDGDYKLIVADADRRLKMYKGSTLLSEQAILGVPVALCVFYS---DSVRP 110          
BLAST of mRNA_H-paniculata_contig2478.6725.1 vs. uniprot
Match: W2R2K8_PHYPN (BBS1 domain-containing protein n=25 Tax=Phytophthora TaxID=4783 RepID=W2R2K8_PHYPN)

HSP 1 Score: 47.8 bits (112), Expect = 9.500e-5
Identity = 24/57 (42.11%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    1 MQFMDLSRNGDFKLVAACKSQQLKVYQGTSLFAEHALLEEPCGLCFFHGKGDDSTRP 57
            MQ +D+  +GD KLV A   Q+LK+Y+G++L  E A+L  P  L +F+    D+ RP
Sbjct:   45 MQLVDVYGDGDAKLVVADGDQRLKMYKGSALHGEQAILGVPSALSYFYS---DNNRP 98          
BLAST of mRNA_H-paniculata_contig2478.6725.1 vs. uniprot
Match: A0A0W8C0V4_PHYNI (Bardet-Biedl syndrome 1 protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C0V4_PHYNI)

HSP 1 Score: 47.8 bits (112), Expect = 9.560e-5
Identity = 24/57 (42.11%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    1 MQFMDLSRNGDFKLVAACKSQQLKVYQGTSLFAEHALLEEPCGLCFFHGKGDDSTRP 57
            MQ +D+  +GD KLV A   Q+LK+Y+G++L  E A+L  P  L +F+    D+ RP
Sbjct:  350 MQLVDVYGDGDAKLVVADGDQRLKMYKGSALHGEQAILGVPSALSYFYS---DNNRP 403          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2478.6725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G3Y7_ECTSI3.470e-1867.27Bardet-Biedl syndrome 1 n=1 Tax=Ectocarpus silicul... [more]
A0A3F2RIQ2_9STRA2.200e-643.86BBS1 domain-containing protein n=12 Tax=Phytophtho... [more]
A0A7S4FYB0_9EUGL5.650e-639.66Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
L1JFP4_GUITC1.970e-539.34BBS1 domain-containing protein (Fragment) n=3 Tax=... [more]
A0A2D4BFR3_PYTIN2.000e-542.11Uncharacterized protein (Fragment) n=1 Tax=Pythium... [more]
A0A024TEN6_9STRA2.710e-542.11BBS1 domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A1V9ZTA5_9STRA5.070e-538.60Bardet-Biedl syndrome 1 family protein n=1 Tax=Ach... [more]
W2R2K8_PHYPN9.500e-542.11BBS1 domain-containing protein n=25 Tax=Phytophtho... [more]
A0A0W8C0V4_PHYNI9.560e-542.11Bardet-Biedl syndrome 1 protein n=3 Tax=Phytophtho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032728Bardet-Biedl syndrome 1, N-terminalPFAMPF14779BBS1coord: 1..57
e-value: 1.5E-11
score: 44.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2478contigH-paniculata_contig2478:390..2968 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2478.6725.1mRNA_H-paniculata_contig2478.6725.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2478 390..2997 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2478.6725.1 ID=prot_H-paniculata_contig2478.6725.1|Name=mRNA_H-paniculata_contig2478.6725.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=58bp
MQFMDLSRNGDFKLVAACKSQQLKVYQGTSLFAEHALLEEPCGLCFFHGK
GDDSTRPP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032728BBS1_N