prot_H-paniculata_contig2457.6662.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2457.6662.1
Unique Nameprot_H-paniculata_contig2457.6662.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length217
Homology
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BLAST of mRNA_H-paniculata_contig2457.6662.1 vs. uniprot
Match: A0A6H5K0L0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L0_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 6.840e-62
Identity = 110/228 (48.25%), Postives = 150/228 (65.79%), Query Frame = 0 
Query:    1 CPSCWEFPEGWAPNDFAFLGPFTDSALQASSPSDSRATARPDSSEGSIASVPAVGRRSRDDVENASVSASTWPGGVLDGGISMTVGPKQIRVKRKGSG-----ATGQTMGIKADRREKPEFHTDLTTTTSVALYRSVVACIIRIFVKVIPCGTATLLSMDSTWPVSYLYDLWRANSVEG------NAEDAFMFLPTMSGQWSLDNQNIPETETSLGVHTGSLPLSRFD 217
            CP CW+FPEG+ P+DFA+LGPF DS+  AS P+  R++       GS++S+P VG ++       + +A+      ++ G + +  P   RV     G      T +  G  ++ +EKPE HTDLTT+ ++ LYRS+V   IRIFVKVIPCGTAT L MDS+WPVSYL+DLWRAN+ EG         DAFM LPT+ G W+LDN+N+PET+T+LGVHTG+LPLS ++
Sbjct:   62 CPCCWDFPEGYVPHDFAYLGPFEDSS--ASRPTSRRSSRSTVDGRGSVSSLPPVGDKTGSTPRTPAAAAAADR---VETGAAASGSPPGRRVSLLMKGMHGVITTDKGEGADSEEKEKPELHTDLTTSAAITLYRSIVGSTIRIFVKVIPCGTATCLWMDSSWPVSYLFDLWRANAAEGCTCVFMGGIDAFMCLPTIPGLWNLDNRNLPETDTTLGVHTGNLPLSTYN 284
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2457.6662.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K0L0_9PHAE6.840e-6248.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2457contigH-paniculata_contig2457:12634..18266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2457.6662.1mRNA_H-paniculata_contig2457.6662.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2457 12634..18266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2457.6662.1 ID=prot_H-paniculata_contig2457.6662.1|Name=mRNA_H-paniculata_contig2457.6662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=217bp
CPSCWEFPEGWAPNDFAFLGPFTDSALQASSPSDSRATARPDSSEGSIAS
VPAVGRRSRDDVENASVSASTWPGGVLDGGISMTVGPKQIRVKRKGSGAT
GQTMGIKADRREKPEFHTDLTTTTSVALYRSVVACIIRIFVKVIPCGTAT
LLSMDSTWPVSYLYDLWRANSVEGNAEDAFMFLPTMSGQWSLDNQNIPET
ETSLGVHTGSLPLSRFD
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