prot_H-paniculata_contig11014.663.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig11014.663.1
Unique Name	prot_H-paniculata_contig11014.663.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	107

Homology

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BLAST of mRNA_H-paniculata_contig11014.663.1 vs. uniprot
Match: D8LSF3_ECTSI (40S ribosomal protein S26 n=3 Tax=Eukaryota TaxID=2759 RepID=D8LSF3_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 2.670e-65
Identity = 103/106 (97.17%), Postives = 106/106 (100.00%), Query Frame = 0

Query:    1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSADTRRHREPPVRHRPKRD 106
            MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSA+TRR+R+PPVRHRPKRD
Sbjct:    1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAETRRNRDPPVRHRPKRD 106

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BLAST of mRNA_H-paniculata_contig11014.663.1 vs. uniprot
Match: A0A835YLU3_9STRA (40S ribosomal protein S26 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLU3_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.380e-58
Identity = 95/106 (89.62%), Postives = 100/106 (94.34%), Query Frame = 0

Query:    1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSADTRRHREPPVRHRPKRD 106
            MTVKRRNHGRNKKGRGHV RVRC STAKAIPKDKAIKRFIVRNIVDASSLRD+REASV+ NYALPKLYIKQYYCVEAAVHQRIVRSRSA+ RR+REPP R RPKR+
Sbjct:    1 MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPARVRPKRE 106

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BLAST of mRNA_H-paniculata_contig11014.663.1 vs. uniprot
Match: A0A7S2SUN8_9STRA (40S ribosomal protein S26 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUN8_9STRA)

HSP 1 Score: 173 bits (438), Expect = 5.150e-54
Identity = 89/102 (87.25%), Postives = 94/102 (92.16%), Query Frame = 0

Query:    1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSADTRRHREPPVRHR 102
            MTVKRR+HGRNKKGRGHV RVRCAST KAIPKDKAIKRFIVRNIVDASS+RDIREAS F+NYALPKLYIKQYY VEAAVHQRIVRSRS + RR+REPP R R
Sbjct:   15 MTVKRRSHGRNKKGRGHVKRVRCASTGKAIPKDKAIKRFIVRNIVDASSMRDIREASAFENYALPKLYIKQYYSVEAAVHQRIVRSRSTENRRNREPPARFR 116

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BLAST of mRNA_H-paniculata_contig11014.663.1 vs. uniprot
Match: A0A7S2MQP1_9STRA (40S ribosomal protein S26 n=4 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2MQP1_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.430e-53
Identity = 86/100 (86.00%), Postives = 93/100 (93.00%), Query Frame = 0

Query:    1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSADTRRHREPPVR 100
            MTVKRRNHGRNKKGRGHV RVRCAST KAIPKDKAIKRFIVRNIVDASS+RDIR+AS F+ YALPK+YIKQYYC+EAAVHQRIVRSRS + RR+REPP R
Sbjct:   24 MTVKRRNHGRNKKGRGHVKRVRCASTGKAIPKDKAIKRFIVRNIVDASSMRDIRDASAFEAYALPKIYIKQYYCIEAAVHQRIVRSRSIENRRNREPPAR 123

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BLAST of mRNA_H-paniculata_contig11014.663.1 vs. uniprot
Match: A0A7S3MCB3_9STRA (40S ribosomal protein S26 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCB3_9STRA)

HSP 1 Score: 164 bits (416), Expect = 8.230e-51
Identity = 83/103 (80.58%), Postives = 93/103 (90.29%), Query Frame = 0

Query:    1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSADTRRHREPPVRHRP 103
            MTVKRRNHGRNK GRGHV RVRC STAKAIPKDKAIKRF+VRNIVD+S+LRDI+E+S ++NY LPKLYIKQYYC+EAAVHQRIVR RSA  R++R PPVR RP
Sbjct:    1 MTVKRRNHGRNKHGRGHVKRVRCVSTAKAIPKDKAIKRFLVRNIVDSSALRDIKESSAYENYQLPKLYIKQYYCIEAAVHQRIVRVRSALDRKNRAPPVRVRP 103

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BLAST of mRNA_H-paniculata_contig11014.663.1 vs. uniprot
Match: A0A7S3K046_9STRA (40S ribosomal protein S26 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K046_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.470e-50
Identity = 81/102 (79.41%), Postives = 92/102 (90.20%), Query Frame = 0

Query:    1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSADTRRHREPPVRHR 102
            M VKRR HGRNKKGRGHV+RVRC ST KAIPKDKAIKRF+VRNIVDASS+RDIR+AS +++YALPKLYIKQYYC+EAAVHQRIVR RS   R++REPP+R R
Sbjct:    1 MAVKRRAHGRNKKGRGHVLRVRCVSTGKAIPKDKAIKRFVVRNIVDASSMRDIRDASAYESYALPKLYIKQYYCIEAAVHQRIVRLRSRTERKNREPPMRRR 102

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BLAST of mRNA_H-paniculata_contig11014.663.1 vs. uniprot
Match: A0A067D0A6_SAPPC (40S ribosomal protein S26 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D0A6_SAPPC)

HSP 1 Score: 164 bits (414), Expect = 1.660e-50
Identity = 80/105 (76.19%), Postives = 94/105 (89.52%), Query Frame = 0

Query:    1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSADTRRHREPPVRHRPKR 105
            MTVKRRNHGRNKKGRGHV RV C STAK IPKDKAIKRF+VRN+VDAS++RD++EASV+++YALPK+YIK YY +EAA+HQRIVR RS D R++REPP R RPKR
Sbjct:    1 MTVKRRNHGRNKKGRGHVKRVHCVSTAKLIPKDKAIKRFVVRNMVDASAMRDLKEASVYESYALPKIYIKNYYSIEAAIHQRIVRVRSVDGRKNREPPARFRPKR 105

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BLAST of mRNA_H-paniculata_contig11014.663.1 vs. uniprot
Match: A0A7S0GMG9_9STRA (40S ribosomal protein S26 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GMG9_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.360e-50
Identity = 83/100 (83.00%), Postives = 89/100 (89.00%), Query Frame = 0

Query:    1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSADTRRHREPPVR 100
            MTVKRRNHGRNKKGRGHV RVRCAST KAIPKDKAIKRFIVRNIVDASSLRDI+EAS +D+Y LPKLY+K YYCVEAAVHQRIVR RS + R+ R PP R
Sbjct:    1 MTVKRRNHGRNKKGRGHVKRVRCASTGKAIPKDKAIKRFIVRNIVDASSLRDIKEASAYDDYTLPKLYLKMYYCVEAAVHQRIVRGRSREGRKIRTPPPR 100

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BLAST of mRNA_H-paniculata_contig11014.663.1 vs. uniprot
Match: A0A4D9D267_9STRA (40S ribosomal protein S26 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D267_9STRA)

HSP 1 Score: 162 bits (409), Expect = 9.610e-50
Identity = 83/103 (80.58%), Postives = 90/103 (87.38%), Query Frame = 0

Query:    1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSADTRRHREPPVRHRP 103
            MTVKRRNHGRNKKGRGHV RVRCAST KA+PKDKAIKR +VR+IVD SS RDI+EA VF+NY LPKLYIKQYY VEAAVHQR+VRSRS + RR REPP R RP
Sbjct:    1 MTVKRRNHGRNKKGRGHVKRVRCASTGKAVPKDKAIKRMVVRSIVDQSSARDIKEARVFENYQLPKLYIKQYYSVEAAVHQRLVRSRSKEDRRIREPPERKRP 103

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BLAST of mRNA_H-paniculata_contig11014.663.1 vs. uniprot
Match: A0A485LRR7_9STRA (40S ribosomal protein S26 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRR7_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.790e-49
Identity = 80/104 (76.92%), Postives = 91/104 (87.50%), Query Frame = 0

Query:    1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSADTRRHREPPVRHRPK 104
            MTVKRRNHGRNKK RGHV RV C STAK IPKDKAIKRF VRNIVDAS++RD++EASV++ YALPK+YIK YYC+EAA+HQRIVR RS + RR+REPP R RPK
Sbjct:   32 MTVKRRNHGRNKKNRGHVKRVHCVSTAKLIPKDKAIKRFTVRNIVDASAMRDLKEASVYETYALPKIYIKNYYCIEAAIHQRIVRVRSVEGRRNREPPARIRPK 135

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig11014.663.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig11014.663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LSF3_ECTSI	2.670e-65	97.17	40S ribosomal protein S26 n=3 Tax=Eukaryota TaxID=...	[more]
A0A835YLU3_9STRA	1.380e-58	89.62	40S ribosomal protein S26 n=1 Tax=Tribonema minus ...	[more]
A0A7S2SUN8_9STRA	5.150e-54	87.25	40S ribosomal protein S26 n=1 Tax=Rhizochromulina ...	[more]
A0A7S2MQP1_9STRA	1.430e-53	86.00	40S ribosomal protein S26 n=4 Tax=Ochrophyta TaxID...	[more]
A0A7S3MCB3_9STRA	8.230e-51	80.58	40S ribosomal protein S26 n=1 Tax=Spumella elongat...	[more]
A0A7S3K046_9STRA	1.470e-50	79.41	40S ribosomal protein S26 n=1 Tax=Aureoumbra lagun...	[more]
A0A067D0A6_SAPPC	1.660e-50	76.19	40S ribosomal protein S26 n=3 Tax=Saprolegniaceae ...	[more]
A0A7S0GMG9_9STRA	2.360e-50	83.00	40S ribosomal protein S26 n=1 Tax=Proboscia inermi...	[more]
A0A4D9D267_9STRA	9.610e-50	80.58	40S ribosomal protein S26 n=1 Tax=Nannochloropsis ...	[more]
A0A485LRR7_9STRA	1.790e-49	76.92	40S ribosomal protein S26 n=1 Tax=Aphanomyces stel...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038551	Ribosomal protein S26e superfamily	GENE3D	3.30.1740.20		coord: 1..105 e-value: 1.0E-44 score: 153.3
IPR000892	Ribosomal protein S26e	PFAM	PF01283	Ribosomal_S26e	coord: 1..104 e-value: 5.8E-47 score: 158.6
IPR000892	Ribosomal protein S26e	PANTHER	PTHR12538	40S RIBOSOMAL PROTEIN S26	coord: 1..102
None	No IPR available	PANTHER	PTHR12538:SF0	40S RIBOSOMAL PROTEIN S26	coord: 1..102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig11014	contig	H-paniculata_contig11014:5028..7430 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig11014.663.1	mRNA_H-paniculata_contig11014.663.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig11014 4390..7745 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig11014.663.1 ID=prot_H-paniculata_contig11014.663.1|Name=mRNA_H-paniculata_contig11014.663.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSL
RDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSADTRRHREPPVR
HRPKRD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR038551	Ribosomal_S26e_sf
IPR000892	Ribosomal_S26e