prot_H-paniculata_contig24426.6613.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24426.6613.1
Unique Nameprot_H-paniculata_contig24426.6613.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length135
Homology
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BLAST of mRNA_H-paniculata_contig24426.6613.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 8.500e-8
Identity = 29/57 (50.88%), Postives = 36/57 (63.16%), Query Frame = 0 
Query:   77 FDDIGQLSLMSESTAQSVFHTFCKRFAEDRFHERIKLPTGDALAVTMKAYDAVGFTG 133
            FDD+ QLS MSES AQ++FH FC+  A + F E I LPTG  L   M  +  +G TG
Sbjct:  146 FDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTG 202
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BLAST of mRNA_H-paniculata_contig24426.6613.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 7.880e-7
Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0 
Query:   77 FDDIGQLSLMSESTAQSVFHTFCKRFAEDRFHERIKLPTGDALAVTMKAYDAVGFTG 133
            FDDI QLS +SE T Q VFH F +RFA + F + +K P G  L   ++ Y  VGF G
Sbjct:  146 FDDIPQLSFISEQTIQRVFHEFTQRFALEFFPKHVKFPQGAHLEEILREYKDVGFGG 202
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24426.6613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KSI7_9PHAE8.500e-850.88DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JHC3_9PHAE7.880e-749.12DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24426contigH-paniculata_contig24426:290..1916 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24426.6613.1mRNA_H-paniculata_contig24426.6613.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24426 247..2212 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24426.6613.1 ID=prot_H-paniculata_contig24426.6613.1|Name=mRNA_H-paniculata_contig24426.6613.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=135bp
MLQFPQSHRHQFERLRPLQEALCNTRSFPRGADEGGVRRTMVSEERRARR
CRRSPNGSCRAEDSGELADSGEREYSFDDIGQLSLMSESTAQSVFHTFCK
RFAEDRFHERIKLPTGDALAVTMKAYDAVGFTGQ*
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