prot_H-paniculata_contig24076.6517.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24076.6517.1
Unique Nameprot_H-paniculata_contig24076.6517.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
BLAST of mRNA_H-paniculata_contig24076.6517.1 vs. uniprot
Match: D7FQ22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ22_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 5.930e-15
Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    1 GHIWEADGRPVCFYCPVCADSR---RTHQKRDLDVMKKLASDRGGECLSTIYAG 51
            GH+WE +G PVCFYCP+CAD+R   R  +KRDL+ M+++A  +GGEC++  Y G
Sbjct:   90 GHVWEPNGTPVCFYCPICADTRITTRMKRKRDLEAMQEIARGKGGECIAEEYLG 143          
BLAST of mRNA_H-paniculata_contig24076.6517.1 vs. uniprot
Match: A0A6H5JCH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH6_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 9.230e-15
Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    1 GHIWEADGRPVCFYCPVCADSR---RTHQKRDLDVMKKLASDRGGECLSTIYAG 51
            GH+WE +G PVCFYCP+CAD+R   R  +KRDL+ M+++A  +GGEC++  Y G
Sbjct:  267 GHVWEPNGTPVCFYCPICADTRITTRMKRKRDLEAMQEIARGKGGECIAEEYLG 320          
BLAST of mRNA_H-paniculata_contig24076.6517.1 vs. uniprot
Match: UPI000BF3B402 (zinc-ribbon domain-containing protein n=2 Tax=Bacillus thuringiensis TaxID=1428 RepID=UPI000BF3B402)

HSP 1 Score: 55.1 bits (131), Expect = 1.990e-7
Identity = 26/56 (46.43%), Postives = 36/56 (64.29%), Query Frame = 0
Query:    1 GHIWEADGRPVCF--YCPVCADSRRTHQKRD-LDVMKKLASDRGGECLSTIYAGTS 53
            GH+WEA    V +  +CP+C    R  ++RD ++ M +LA  RGGECLS IY G+S
Sbjct:   37 GHVWEATLGNVKYGKWCPICGRKNRGLRRRDKIENMHRLAKQRGGECLSQIYEGSS 92          
BLAST of mRNA_H-paniculata_contig24076.6517.1 vs. uniprot
Match: A0A8J6RFR8_9CYAN (Uncharacterized protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6RFR8_9CYAN)

HSP 1 Score: 51.6 bits (122), Expect = 3.330e-6
Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 0
Query:    1 GHIWEADGRPVCF---YCPVCADSRRTHQKRDLDVMKKLASDRGGECLSTIYAGTS 53
            GH WEA+   +     +CP CA +     K+ ++ M++LA++RGG+CLSTIY GT+
Sbjct:  233 GHQWEANADNIINGGKWCPDCAGNN----KKTIEDMQRLAAERGGKCLSTIYQGTN 284          
BLAST of mRNA_H-paniculata_contig24076.6517.1 vs. uniprot
Match: UPI000F83945D (hypothetical protein n=1 Tax=Pragia fontium TaxID=82985 RepID=UPI000F83945D)

HSP 1 Score: 48.9 bits (115), Expect = 2.700e-5
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    1 GHIWEADGRPVCF---YCPVCADSRRTHQKRDLDVMKKLASDRGGECLSTIY 49
            GH W+A  R +     +CP+CA+ ++   +  L  M+KLA+ RGGECLST Y
Sbjct:  101 GHEWQAVSRQIISEHTWCPICANDKK---RGTLAKMQKLATSRGGECLSTQY 149          
BLAST of mRNA_H-paniculata_contig24076.6517.1 vs. uniprot
Match: A0A2B8J9A2_PRIMG (Uncharacterized protein n=1 Tax=Priestia megaterium TaxID=1404 RepID=A0A2B8J9A2_PRIMG)

HSP 1 Score: 48.9 bits (115), Expect = 2.970e-5
Identity = 23/51 (45.10%), Postives = 30/51 (58.82%), Query Frame = 0
Query:    1 GHIWEADGRPVCF--YCPVCADSRRTHQKRDLDVMKKLASDRGGECLSTIY 49
            GHIWEA    +    +C  CA   R    + L+ ++KLA +RGGECLST Y
Sbjct:  106 GHIWEATPGSIKTGTWCKKCAIENRVVSHKVLEELRKLAHERGGECLSTTY 156          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24076.6517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FQ22_ECTSI5.930e-1553.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCH6_9PHAE9.230e-1553.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI000BF3B4021.990e-746.43zinc-ribbon domain-containing protein n=2 Tax=Baci... [more]
A0A8J6RFR8_9CYAN3.330e-642.86Uncharacterized protein n=2 Tax=Cyanobacteria TaxI... [more]
UPI000F83945D2.700e-544.23hypothetical protein n=1 Tax=Pragia fontium TaxID=... [more]
A0A2B8J9A2_PRIMG2.970e-545.10Uncharacterized protein n=1 Tax=Priestia megateriu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24076contigH-paniculata_contig24076:3524..3712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24076.6517.1mRNA_H-paniculata_contig24076.6517.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24076 3524..3712 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24076.6517.1 ID=prot_H-paniculata_contig24076.6517.1|Name=mRNA_H-paniculata_contig24076.6517.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
GHIWEADGRPVCFYCPVCADSRRTHQKRDLDVMKKLASDRGGECLSTIYA
GTS
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