prot_H-paniculata_contig110.650.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig110.650.1
Unique Nameprot_H-paniculata_contig110.650.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length178
Homology
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: D7G8X1_ECTSI (Histone deacetylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X1_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 1.610e-69
Identity = 113/158 (71.52%), Postives = 131/158 (82.91%), Query Frame = 0
Query:    2 GCGDNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSGGVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALPVSVPDHAYFPLYGPDFRLATKPKTLKDNNDSAFLAELGDFATQATRRV-ASSLARENSL 158
            GCGD +F+ VF++   +V EAF+PEA VLLCGADTL+ADPLGPFNLTS GVR+C+E V+AL++PLLLLGGGGYCPTDTAR+WT+LTAAAVG +ALAALP +VPDH YFPLYGPDFR+ATK KTL D ND  FL  L DFA QA RRV A+   RE SL
Sbjct:  633 GCGDASFLRVFTSAFQAVTEAFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCLELVMALELPLLLLGGGGYCPTDTARLWTSLTAAAVGADALAALPATVPDHCYFPLYGPDFRMATKEKTLPDKNDDDFLDRLSDFAAQAGRRVRAAKKKRERSL 790          
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A6H5JLL7_9PHAE (Histone deacetylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL7_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 2.170e-69
Identity = 113/158 (71.52%), Postives = 133/158 (84.18%), Query Frame = 0
Query:    2 GCGDNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSGGVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALPVSVPDHAYFPLYGPDFRLATKPKTLKDNNDSAFLAELGDFATQATRRV-ASSLARENSL 158
            GCGD++F+ VF++ L +V  AF+PEA VLLCGADTL+ADPLGPFNLTS GVR+C+E V+AL++PLLLLGGGGYCPTDTAR+WT+LTAAAVG +ALAALPV+VPDH YFPLYGPDFR+AT+ KTL D ND  FL  L DFA QA RRV A+   RE SL
Sbjct:  607 GCGDSSFLRVFTSALQAVTGAFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCLELVMALELPLLLLGGGGYCPTDTARLWTSLTAAAVGADALAALPVTVPDHCYFPLYGPDFRMATRKKTLPDKNDDDFLDRLCDFAAQAGRRVRAAKKKRERSL 764          
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A835YMW5_9STRA (Histone deacetylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMW5_9STRA)

HSP 1 Score: 138 bits (347), Expect = 6.220e-36
Identity = 69/139 (49.64%), Postives = 86/139 (61.87%), Query Frame = 0
Query:    3 CGDNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSGGVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALPVSVPDHAYFPLYGPDFRLATKPKTLKDNNDSAFLAELGDFA 141
            C D  +  VF     + V+AFRP   VL CGAD L ADP+G  NLT+ G++ACV +V+A  +P L+LGGGGY    TAR+WT LTA A+G  A  ALP SVPDH +F  YGP F + T P+ L+D N    L    D A
Sbjct:  214 CCDAAYQGVFDAVXXAAVDAFRPACVVLQCGADALGADPIGRLNLTTRGLQACVRRVIAARLPTLVLGGGGYDGAATARLWTALTATAIGEGAEEALPSSVPDHPHFARYGPSFDMHTAPRRLRDANAPEALRAARDRA 352          
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A813RYE3_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813RYE3_9BILA)

HSP 1 Score: 126 bits (317), Expect = 2.820e-33
Identity = 62/142 (43.66%), Postives = 89/142 (62.68%), Query Frame = 0
Query:    2 GCGDNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSGGVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALPVSVPDHAYFPLYGPDFRLATKPKTLKDNNDSAFLAELGDFATQ 143
            G  D+ ++ +FS  L S+ ++F P+  V+ CG DTL  DP   FNLT+ G+  C++Q++ L+  LL LGGGGY   DTAR+WTTLT  A+G E +      +P+H YFPLYGPDF L T P   K+ N  + + ++ D+  Q
Sbjct:   61 GITDDMYLSIFSKLLLSINQSFSPDVYVIQCGGDTLFNDPFQAFNLTTQGLAECIKQIIELNKFLLFLGGGGYNLPDTARLWTTLTNVALGNEKVDN---DIPEHDYFPLYGPDFTLDTWPGNRKNKNTDSSINQIYDYIQQ 199          
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A024U3H9_9STRA (Histone deacetylase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U3H9_9STRA)

HSP 1 Score: 129 bits (325), Expect = 7.890e-33
Identity = 69/157 (43.95%), Postives = 94/157 (59.87%), Query Frame = 0
Query:    2 GCGDNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSGGVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALPVSVPDHAYFPLYGPDFRLATKPKTLKDNNDSAFLAELGDFATQATRRVASSLARENSL 158
            G  DN F  VF   + ++VEAF P   V+ CG DTLA DPLG FNLT+ G+  C++ V  L++PLLLLGGGGY  +D AR +  LTA A+       LP  V DH YFP+YGP F +AT P   + N ++  +A L     QA +++     RE+++
Sbjct:  221 GITDNQFFEVFEVVVQAIVEAFMPTHVVMTCGVDTLATDPLGTFNLTATGLCWCLDVVKELELPLLLLGGGGYNESDAARCFAALTATAID----QMLPDQVSDHDYFPMYGPHFGMATAPVKARVNKNT--VASLEATCQQALKQIGRLRRREDAV 371          
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A6G0XH97_9STRA (Histone deacetylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XH97_9STRA)

HSP 1 Score: 124 bits (312), Expect = 8.500e-30
Identity = 72/164 (43.90%), Postives = 94/164 (57.32%), Query Frame = 0
Query:    2 GCGDNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSGGVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALPVSVPDHAYFPLYGPDFRLATKP-KTLKDNNDSAFLAE--LGDFATQ--ATRRVASSLARENSLEL 160
            G  D  F+ VF   +  VV+AF+P   V+ CG DTL+ DPLG FNLTS GV  CVE V    +PLLLLGGGGYC  D AR +  +TAA V  E    LP+ VPDH + P YGP F  A K  K+ +++     + E  L  F      T ++A+SL  +  L++
Sbjct:  195 GITDEQFLEVFELIVEPVVDAFQPTYIVMTCGVDTLSTDPLGTFNLTSTGVTWCVEVVREFQLPLLLLGGGGYCEADAARCFAAVTAALVDQE----LPMQVPDHDFLPQYGPHFSTAIKAVKSREEDKRHLCIIERLLSSFKVSHSMTFQIATSLLEQVDLDV 354          
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A814T6M6_ADIRI (Alpha-1,3/1,6-mannosyltransferase ALG2 n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A814T6M6_ADIRI)

HSP 1 Score: 122 bits (307), Expect = 3.780e-29
Identity = 59/139 (42.45%), Postives = 84/139 (60.43%), Query Frame = 0
Query:    2 GCGDNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSGGVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALPVSVPDHAYFPLYGPDFRLATKPKTLKDNNDSAFLAELGDF 140
            G  D  ++ +FS  L  +  +F+PE  V+ CGADTL  DP+  FNLT+  +  C+EQ++ L+ PLL+LGGGGY   DTAR+WT++T   +  +    L   +P+H YF  YGPDF L T P    + N+  +L  L DF
Sbjct:  634 GIDDKQYISIFSRLLPKIHSSFQPEVFVVQCGADTLFGDPMKSFNLTTQSILTCIEQILQLNKPLLILGGGGYNIADTARLWTSITGLCLNIK----LENDIPEHDYFSYYGPDFTLQTWPGNRSNQNNETYLDSLIDF 768          
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A2J6RAT5_9HELO (Histone deacetylase n=1 Tax=Hyaloscypha variabilis F TaxID=1149755 RepID=A0A2J6RAT5_9HELO)

HSP 1 Score: 120 bits (302), Expect = 7.180e-29
Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = 0
Query:    2 GCGDNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSGGVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALPVSVPDHAYFPLYGPDFRLATKPKTLKDNNDSAFLAELGDFATQATRRV 148
            G  D ++ ++F + ++ V+E +RP+A VL CGAD+L  D LG FNL+S G   CV  +   +IPLL+LGGGGY   + AR W+  T   VG E    +   +P H Y+  YGPDFRLA +P T ++NN   +L ++     +  R V
Sbjct:  242 GIDDESYKYIFESVINKVMENYRPDAIVLQCGADSLNGDKLGSFNLSSAGHANCVSFMKRFNIPLLVLGGGGYTLRNVARAWSYETGICVGQE----MAQDIPYHEYYGYYGPDFRLAVRPSTAENNNSKQYLDKITTQILKNLREV 384          
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: W4GJY7_9STRA (Histone deacetylase n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GJY7_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.050e-28
Identity = 59/119 (49.58%), Postives = 74/119 (62.18%), Query Frame = 0
Query:    2 GCGDNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSGGVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALPVSVPDHAYFPLYGPDFRLAT 120
            G  D+ F+ VF   + +V EAF P   V+ CG DTL+ DPLG FNLT+ G+  C+E V  +++PLL+LGGGGY   D AR +  LTA AV       LP  VPDH YFP YGP F + T
Sbjct:  222 GITDDQFLEVFELVVQAVAEAFEPSHVVMTCGVDTLSTDPLGTFNLTATGLCWCLEVVKEMELPLLVLGGGGYNEADAARCFAALTATAVDQP----LPQDVPDHDYFPKYGPHFEMRT 336          
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: UPI0020102618 (LOW QUALITY PROTEIN: histone deacetylase 8-like n=1 Tax=Leguminivora glycinivorella TaxID=1035111 RepID=UPI0020102618)

HSP 1 Score: 119 bits (298), Expect = 1.120e-28
Identity = 59/132 (44.70%), Postives = 82/132 (62.12%), Query Frame = 0
Query:    5 DNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSGGVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALPVSVPDHAYFPLYGPDFRLATKPKTLKDNNDSAFLAE 136
            D+T  +VF    SS+++ F P+A V+ CGAD LA DP G   +T+ G  ACV  V+A   P +LLGGGGY   + AR+WT+LTA   G     +L  ++P+H Y+P YGPD+ LA +P   KD N + +L E
Sbjct:  229 DDTLEYVFGKVFSSILDHFHPDAIVVQCGADALALDPHGGACVTARGYSACVTTVLAAGRPTMLLGGGGYNHANAARLWTSLTALVAG----VSLDENIPEHTYWPQYGPDYTLAIQPTLSKDTNKTVYLDE 356          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8X1_ECTSI1.610e-6971.52Histone deacetylase n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5JLL7_9PHAE2.170e-6971.52Histone deacetylase n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A835YMW5_9STRA6.220e-3649.64Histone deacetylase n=1 Tax=Tribonema minus TaxID=... [more]
A0A813RYE3_9BILA2.820e-3343.66Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A024U3H9_9STRA7.890e-3343.95Histone deacetylase n=1 Tax=Aphanomyces invadans T... [more]
A0A6G0XH97_9STRA8.500e-3043.90Histone deacetylase n=1 Tax=Aphanomyces euteiches ... [more]
A0A814T6M6_ADIRI3.780e-2942.45Alpha-1,3/1,6-mannosyltransferase ALG2 n=2 Tax=Adi... [more]
A0A2J6RAT5_9HELO7.180e-2940.82Histone deacetylase n=1 Tax=Hyaloscypha variabilis... [more]
W4GJY7_9STRA1.050e-2849.58Histone deacetylase n=12 Tax=Aphanomyces astaci Ta... [more]
UPI00201026181.120e-2844.70LOW QUALITY PROTEIN: histone deacetylase 8-like n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 2..89
e-value: 4.7E-17
score: 62.4
IPR037138Histone deacetylase domain superfamilyGENE3D3.40.800.20coord: 1..166
e-value: 2.2E-37
score: 131.1
NoneNo IPR availablePANTHERPTHR10625HISTONE DEACETYLASEcoord: 2..149
IPR023696Ureohydrolase domain superfamilySUPERFAMILY52768Arginase/deacetylasecoord: 2..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig110contigH-paniculata_contig110:38985..43522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig110.650.1mRNA_H-paniculata_contig110.650.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig110 33360..45153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig110.650.1 ID=prot_H-paniculata_contig110.650.1|Name=mRNA_H-paniculata_contig110.650.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp
MGCGDNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSG
GVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALP
VSVPDHAYFPLYGPDFRLATKPKTLKDNNDSAFLAELGDFATQATRRVAS
SLARENSLELTPCRAYDDACTVDGDSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023801His_deacetylse_dom
IPR037138His_deacetylse_dom_sf
IPR023696Ureohydrolase_dom_sf