prot_H-paniculata_contig240.6495.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig240.6495.1
Unique Nameprot_H-paniculata_contig240.6495.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length575
Homology
BLAST of mRNA_H-paniculata_contig240.6495.1 vs. uniprot
Match: D7FUP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP0_ECTSI)

HSP 1 Score: 400 bits (1029), Expect = 2.600e-129
Identity = 267/616 (43.34%), Postives = 332/616 (53.90%), Query Frame = 0
Query:    1 MVAGTDAPSWTFGLALKVPVPLVPGPGTYNVGRELT--SVGPRFGRIGT-PKMAQQDPKRLMFDAEREKCDIPGPGAYDSRASRTTRRWQVYPPGEKKVHSPRFPDAVSATDAGPGAYVSPEHNRQGPSFSIAARPPRSLEGPESPGPGQYVRVRLK-GQGKPTAVEVAAGFGNRTSPRFDSANSNAGGLGPGTYQDPSFKPSIGKDITFGRLIRPAGWTAKIRDIVRNPCELKSNSG-----DEDSRHSRSSGPCFRASSRINSLTTTIGGCYRCRRDRSRLLSSTPASPRLVRACARGRK---------------------QYQKHERSNEVARARGNRPIDEVIKKDGRRRRKAQATARMDGSGGVFSNAVSPRPRSAV------FTTAPQRPSERMASPGPAAYHPQTLDEAAREGRVLGRFPKDPECVRRPGVGEYDLGAAERATGGASVVLPVTFGRRASVGSAPYDPCLGRYLWTDN-RSTPSPHSYRPETAAGGRGKCGIGGHASAPPAWSFGGKGKNPRPPSGPGPGGRVFAYE--------PSPPAVTFGVGRAWTPGVVSGVPWEEAAERLRRGEGGGVDAKLYLPGRTRFGARAHMNARRVPVP 571
            M A  D+P+WTFGL   VP P VPGPGTYNV   L   S G  F  IG  P   + D KRL+F  ERE  D PGPGAYD   +R   RW V P  ++K  +PRFP +  ATDAGPGAY+S E   +GP++S+ +R P +L+ PESPGPGQYV V+L  G+G+  A E   GFG R SPRF  A       GPG YQ P+F P +GK+ITFGR +RPAGW+A+I++I R  CEL  ++      D D + S       R  + ++                                  RGR+                                   R  R I +V+K+ GRR+R   A A      GV ++    R R           TAPQRP +   SPGP++Y P TLDE AR+G+V+G   +  +   RPGVG+YDL AAE A  G+S  +P T GR+ +   APYDP L RYL+ D+ R TPS H+YRPE+A GG G  G+ G A+APPAWSFGGK   PRPP GPGPG     Y          SP  V FG GR    G VSGVPW EA ER  RGE GG  A+LYLP R R G+RA M +R++P P
Sbjct:    1 MAASIDSPAWTFGLNPTVPGPRVPGPGTYNVAGSLDGGSAGTFFSPIGAKPTCPRTDVKRLVFGIEREGRDKPGPGAYDVTKNRPL-RWNVSP-RDRKHQTPRFPVSSPATDAGPGAYISSEFAGKGPAYSMPSRSPTTLDTPESPGPGQYVHVQLSVGRGENGAGE---GFGKRDSPRF--ATEATPTPGPGEYQSPAFNPQLGKNITFGRNLRPAGWSARIKEITRFACELDGDNXXXXXCDGDQQWSGGWRRVGRFRAPLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRRLDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCRRPRFIADVVKEAGRRKRAKSAAAMSAKITGVGASPSKRRSRETATGRGSSMGTAPQRPPDAAPSPGPSSYLPATLDETARDGKVVGIGGRSKDSAPRPGVGDYDLRAAEAAAAGSSTAVPPTLGRKPT--GAPYDPALSRYLFRDDGRVTPSAHAYRPESATGGGGDGGLAGQAAAPPAWSFGGKRPTPRPPDGPGPGKFRPPYNNETDPCCSSSPAGVRFGAGREDMSGSVSGVPWVEAEERAARGEAGGRSARLYLPERDRMGSRAFMRSRQLPRP 607          
BLAST of mRNA_H-paniculata_contig240.6495.1 vs. uniprot
Match: A0A6H5KCT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT4_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 7.490e-49
Identity = 107/192 (55.73%), Postives = 122/192 (63.54%), Query Frame = 0
Query:  389 RFPKDPECVRRPGVGEYDLGAAERATGGASVVLPVTFGRRASVGSAPYDPCLGRYLWTDN-RSTPSPHSYRPETAAGGRGKCGIGGHASAPPAWSFGGKGKNPRPPSGPGPGGRVFAYE--------PSPPAVTFGVGRAWTPGVVSGVPWEEAAERLRRGEGGGVDAKLYLPGRTRFGARAHMNARRVPVP 571
            RFP+D     RPGVG+YDL AAE A  G+S  +P T GR+ +   APYDP L RYL+ D+ R TPS H+YRPE+A GG G  G+ GHASAPP WSFGGK   PRPP GPGPG     Y          SP  V FGVGR    G VSGVPW EA ER  RGE GG  A+LYLP R R G+R  M +RR+P P
Sbjct:  174 RFPRD--AALRPGVGDYDLRAAEAAACGSSTAVPPTLGRKPT--GAPYDPALSRYLFRDDGRVTPSSHAYRPESARGGGGDGGLAGHASAPPGWSFGGKRPAPRPPDGPGPGKFRPPYNNESDPCCSSSPARVRFGVGREDISGSVSGVPWVEAEERAARGEAGGRSARLYLPERDRMGSRVFMRSRRLPRP 361          
BLAST of mRNA_H-paniculata_contig240.6495.1 vs. uniprot
Match: A0A8J6AYX4_9EUKA (Sperm-tail PG-rich repeat n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6AYX4_9EUKA)

HSP 1 Score: 60.8 bits (146), Expect = 1.660e-6
Identity = 61/178 (34.27%), Postives = 75/178 (42.13%), Query Frame = 0
Query:   24 PGPGTYNVGRELTSVGPRFGRIGTPKMAQQDPKRLMFDAEREKCDIPGPGAYDSRASRTTRRWQVYPPGEKKVHSPRFPDAVSATDAGPGAYVS---------PEHNRQGPSFSIAARPPRSLEGPESPGPGQY-VRVRLKGQGKPTAVEVAAGFGNRTSPRFDSANSNAGGLGPGTY 191
            PGPG YNV + +T    + G+      A   P      ++    DIPGPG+Y    + T         G  KV S RF    + +  GPGAY S         P   R     S A R P  L+GP +PGPGQY V     G     +    A F N TS RFD+ N      GPG Y
Sbjct:   84 PGPGAYNVDQVITIT--KSGKTVRAPFASPRPA-----SKPTGMDIPGPGSYSPEHNPTLTPAH----GAYKVTSGRFKSDATESP-GPGAYHSDNYWTKSKRPSSARTSSMGSQARRSPW-LQGPSTPGPGQYSVYTPTSGPSSRASTPGGASF-NTTSRRFDNYNEEV--PGPGAY 245          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig240.6495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FUP0_ECTSI2.600e-12943.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCT4_9PHAE7.490e-4955.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J6AYX4_9EUKA1.660e-634.27Sperm-tail PG-rich repeat n=1 Tax=Carpediemonas me... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21580SHIPPO-1-RELATEDcoord: 309..501
coord: 8..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig240contigH-paniculata_contig240:3732..8312 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig240.6495.1mRNA_H-paniculata_contig240.6495.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig240 3732..8312 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig240.6495.1 ID=prot_H-paniculata_contig240.6495.1|Name=mRNA_H-paniculata_contig240.6495.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=575bp
MVAGTDAPSWTFGLALKVPVPLVPGPGTYNVGRELTSVGPRFGRIGTPKM
AQQDPKRLMFDAEREKCDIPGPGAYDSRASRTTRRWQVYPPGEKKVHSPR
FPDAVSATDAGPGAYVSPEHNRQGPSFSIAARPPRSLEGPESPGPGQYVR
VRLKGQGKPTAVEVAAGFGNRTSPRFDSANSNAGGLGPGTYQDPSFKPSI
GKDITFGRLIRPAGWTAKIRDIVRNPCELKSNSGDEDSRHSRSSGPCFRA
SSRINSLTTTIGGCYRCRRDRSRLLSSTPASPRLVRACARGRKQYQKHER
SNEVARARGNRPIDEVIKKDGRRRRKAQATARMDGSGGVFSNAVSPRPRS
AVFTTAPQRPSERMASPGPAAYHPQTLDEAAREGRVLGRFPKDPECVRRP
GVGEYDLGAAERATGGASVVLPVTFGRRASVGSAPYDPCLGRYLWTDNRS
TPSPHSYRPETAAGGRGKCGIGGHASAPPAWSFGGKGKNPRPPSGPGPGG
RVFAYEPSPPAVTFGVGRAWTPGVVSGVPWEEAAERLRRGEGGGVDAKLY
LPGRTRFGARAHMNARRVPVPRRG*
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