prot_H-paniculata_contig2393.6473.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2393.6473.1
Unique Nameprot_H-paniculata_contig2393.6473.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length210
Homology
BLAST of mRNA_H-paniculata_contig2393.6473.1 vs. uniprot
Match: A0A6H5KVI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI4_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 1.280e-66
Identity = 121/205 (59.02%), Postives = 141/205 (68.78%), Query Frame = 0
Query:    1 MRVLKPSRRSLKCSFIVTVSLAMGAGGFLANPGARGGLGQSRWISPFIRTTANSIWRERFFSTTLHGVKEWKAGQPDDLRHLGFLPFPVDDVMCPGETKDLHLYEARFLALFENAIKNHGGCVGGAIFVDDGVLVRVGQLCDIISWNREQVGVSVALRCVGRVEIADMIAVEPYISATVREVNDFVGA-ESNVDG-DNDEVSADV 203
            M +    R    C++ V  SL +  G F + P       +SRW     R T           T L+GV+EWK GQP DLR +G LPFP+DDVMCPGETK LHLYEARFL+LFENAIKNHGGCVGGAIFVDDGVLVRVGQLCDI++W RE+VGVSVALRC+GR EI D+  V+PYI A VREV D VG  E + +G DN  VS+DV
Sbjct:    6 MNMRSGRRTGWGCAWAVAASLCVRTGAFFSTPPHS----RSRWG----RAT-----------TELNGVREWKQGQPGDLREIGLLPFPIDDVMCPGETKALHLYEARFLSLFENAIKNHGGCVGGAIFVDDGVLVRVGQLCDIVAWEREEVGVSVALRCIGRCEIGDVTNVDPYIRANVREVRDVVGMDEPDEEGEDNGVVSSDV 191          
BLAST of mRNA_H-paniculata_contig2393.6473.1 vs. uniprot
Match: D8LHT0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHT0_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 2.680e-37
Identity = 70/120 (58.33%), Postives = 82/120 (68.33%), Query Frame = 0
Query:   13 CSFIVTVSLAMGAGGFLAN-PGARGGLGQSRWISPFIRTTANSIWRERFFSTTLHGVKEWKAGQPDDLRHLGFLPFPVDDVMCPGETKDLHLYEARFLALFENAIKNHGGCVGGAIFVDD 131
            C++ V  SL +  G F A+ P +RG  G++                    +T L+GV+EWK GQP DLR +G LPFPVDDVMCPGETK LHLYEARFL+LFENAIKNHGGCVGGAIFVDD
Sbjct:   12 CAWAVAASLCVRTGAFFASLPHSRGRWGRA--------------------TTELNGVREWKQGQPGDLREIGLLPFPVDDVMCPGETKALHLYEARFLSLFENAIKNHGGCVGGAIFVDD 111          
BLAST of mRNA_H-paniculata_contig2393.6473.1 vs. uniprot
Match: A0A7S2BRE0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2BRE0_9EUKA)

HSP 1 Score: 95.5 bits (236), Expect = 1.930e-21
Identity = 46/113 (40.71%), Postives = 69/113 (61.06%), Query Frame = 0
Query:   62 STTLHGVKEWKAG-QP-----DDLRHLGFLPFPVDDVMCPGETKDLHLYEARFLALFENAIKNHGGCVGGAIFVDDGVLVRVGQLCDIISWNREQVGVSVALRCVGRVEIADM 168
            + ++  V +W A  QP     +   HLG LPFPVD+ + PGETK +HLYEARF+ LF NA ++HG CVG  +F D G +  +  +  I  + +++ GV   L+CVGR  + ++
Sbjct:   21 AASVRSVSKWLASRQPSTSSVEPQLHLGLLPFPVDEALLPGETKQVHLYEARFIELFANAAEHHGSCVGMLLFGDGGTVDAITPVLMIEEFRKQEFGVWAQLKCVGRARLLEL 133          
BLAST of mRNA_H-paniculata_contig2393.6473.1 vs. uniprot
Match: A0A7S2UQX1_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQX1_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.190e-21
Identity = 55/143 (38.46%), Postives = 85/143 (59.44%), Query Frame = 0
Query:   45 SPFI-RTTANSIWRERFFSTTLHGVKEWKAGQPDDL-RHLGFLPFPVDDVMCPGETKDLHLYEARFLALFENAIKNHGGCVGGAIFVDDGVLVRVGQLCDIISWNR-EQVGVSVALRCVGRVEIADMIAVEPYISATVREVND 184
            +PF+ R    S WR+  F+    G      G+   L + +  LPFP ++V+  GETK+L LYE RF+ LF+  ++NHGG VG  +  D G++  V  LC++ ++NR E++G+ V +R VGR  + D+   EPYI A   E++D
Sbjct:   35 NPFLPRLNGISEWRDTMFN--FPGAGRMNLGEDQALPKEICILPFPYEEVLLQGETKELRLYEDRFIQLFDYCMENHGGVVGMGMLADSGIIQTV-PLCEVEAYNRMEELGILVTIRVVGRATLFDLTQQEPYIKAVCVEISD 174          
BLAST of mRNA_H-paniculata_contig2393.6473.1 vs. uniprot
Match: A0A7S0LS06_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LS06_9EUKA)

HSP 1 Score: 95.5 bits (236), Expect = 9.780e-20
Identity = 56/170 (32.94%), Postives = 87/170 (51.18%), Query Frame = 0
Query:   46 PFIRTTANSIWRERFFSTTLHGVKEWKA-------GQPDDLR--HLGFLPFPVDDVMCPGETKDLHLYEARFLALFENAIKNHGGCVGGAIFVDDGVLVRVGQLCDIISWNREQVGVSVALRCVGRVEIADMIAVE-PYISATVREVNDFVGAESNVDGDNDEVSADVRE 205
            P   T  +++  +R    T     +W+A       G  DD     LG LPFP+ + + PGETK +HLYEARF  LFE+A + HGGC+G  +    G +  V  L ++    R+++GV   L+CVGRV +  +   +  Y+   V  ++D    + + +   DE +A  RE
Sbjct:   34 PSCGTPPHALRSQRRARPTRLSAADWRAAGERAAAGDEDDKSPYQLGLLPFPLSEALLPGETKQVHLYEARFTRLFEDAAREHGGCLGQLLLTPAGNVAAVTSLLEVEESRRQEIGVWAQLKCVGRVRLTSLRQTDYQYVLGDVELLSDKTFVDRDAEDAADEQAAAKRE 203          
BLAST of mRNA_H-paniculata_contig2393.6473.1 vs. uniprot
Match: A0A7S3X878_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3X878_EMIHU)

HSP 1 Score: 94.7 bits (234), Expect = 1.220e-19
Identity = 55/143 (38.46%), Postives = 80/143 (55.94%), Query Frame = 0
Query:   67 GVKEWKA-GQPDDLRHLGFLPFPVDDVMCPGETKDLHLYEARFLALFENAIKNHGGCVGGAIFVDDGVLVRVGQLCDIISWNR--EQVGVSVALRCVGRVEIADMIAVE-PYISATVREVNDFVGAESNVDGDNDEVSADVRE 205
            G  EW A G P +L   GFLPFP+D  + PGET+ +HLYEARF+ LF  A   H  C+G  +F   G +  V  L +I  +    E++GV   L+CVGRV++ ++   E  Y+S  V    D +  E   +  +D  +A++RE
Sbjct:   40 GAAEWLASGSPLEL---GFLPFPLDQALLPGETRQVHLYEARFITLFSEAASKHHDCLGAVLFTPQGNVASVTSLLEIEEFRTGAEEIGVWANLKCVGRVKLKELETTEFDYLSGGVELFTDSLPTEERAE--DDAAAAELRE 177          
BLAST of mRNA_H-paniculata_contig2393.6473.1 vs. uniprot
Match: B7FQF4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQF4_PHATC)

HSP 1 Score: 94.0 bits (232), Expect = 3.820e-19
Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = 0
Query:   62 STTLHGVKEWK------AGQPDDLR----------HLGFLPFPVDDVMCPGETKDLHLYEARFLALFENAIKNHGGCVGGAIFVDDGVLVRVGQLCDIISWNR-EQVGVSVALRCVGRVEIADMIAVEPYISATVREVND 184
            ST   G+ EW+       G  DD R           +  LPFP  +V+  GETK L LYE RF+ LF++A+KNH G V   +  D G++  V  LC+I ++NR E  G+ V +R VGR ++ +++  EPY+ A   E+ D
Sbjct:   40 STACFGIGEWRDTFFNFPGAGDDRRIGTESGPPPKEVCILPFPFVEVLLQGETKQLRLYEERFIKLFDDAMKNHSGVVAMGLLADSGIIQTV-PLCEIEAYNRLEGFGIFVTIRAVGRAQLVEIVQQEPYLKAVCTELAD 178          
BLAST of mRNA_H-paniculata_contig2393.6473.1 vs. uniprot
Match: A0A7S0TK28_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TK28_HEMAN)

HSP 1 Score: 92.4 bits (228), Expect = 1.040e-18
Identity = 52/116 (44.83%), Postives = 71/116 (61.21%), Query Frame = 0
Query:   70 EWKAGQPDDLRHLGFLPFPVDDVMCPGETKDLHLYEARFLALFENAI-KNHGGCVGGAIFVDDGVLVRVGQLCDIISWNREQVGVSVALRCVGRVEIADMIAVEPYISATVREVND 184
            EW  G   +   LG LPFP+ D++ PGETK LHL+EARFL LFE A  KN G  V   + V+   L+ VG   ++I W+   VGV V + CVGRV++  ++ + PY SA V+  +D
Sbjct:   80 EW--GSDAEGMTLGCLPFPIQDLLLPGETKSLHLFEARFLKLFEEATGKNKGRLV--QLIVNGQDLLNVGCALEVIDWHPLDVGVKVKVVCVGRVQVTKVVGMAPYPSALVQAYSD 191          
BLAST of mRNA_H-paniculata_contig2393.6473.1 vs. uniprot
Match: R1E1S0_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E1S0_EMIHU)

HSP 1 Score: 94.0 bits (232), Expect = 1.040e-18
Identity = 55/143 (38.46%), Postives = 80/143 (55.94%), Query Frame = 0
Query:   67 GVKEW-KAGQPDDLRHLGFLPFPVDDVMCPGETKDLHLYEARFLALFENAIKNHGGCVGGAIFVDDGVLVRVGQLCDIISWNR--EQVGVSVALRCVGRVEIADMIAVE-PYISATVREVNDFVGAESNVDGDNDEVSADVRE 205
            G  EW  AG P +L   GFLPFP+D  + PGET+ +HLYEARF+ LF  A   H  C+G  +F   G +  V  L +I  +    E++GV   L+CVGRV++ ++   E  Y+S  V    D +  E   +  +D  +A++RE
Sbjct:  348 GRAEWLAAGSPLEL---GFLPFPLDQALLPGETRQVHLYEARFITLFSEAASKHHDCLGAVLFTPQGNVASVTSLLEIEEFRTGAEEIGVWANLKCVGRVKLKELETTEFDYLSGGVELFTDSLPTEERAE--DDAAAAELRE 485          
BLAST of mRNA_H-paniculata_contig2393.6473.1 vs. uniprot
Match: A0A7S4R6W7_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R6W7_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 7.890e-18
Identity = 45/108 (41.67%), Postives = 67/108 (62.04%), Query Frame = 0
Query:   80 RHLGFLPFPVDDVMCPGETKDLHLYEARFLALFENAIKNHGGCVGGAIFVDDGVLVRVGQLCDIISWNR-EQVGVSVALRCVGRVEIADMIAVEPYISATVREVNDFV 186
            R +  LPFP +DV+  GETK+L LYE RF+ LFE  +  H G V   +  + G+ ++   LC+I ++NR E  G+ V +R VGRV + ++   EPYI A  RE++D +
Sbjct:   85 REMCVLPFPYEDVLLQGETKELRLYEDRFIKLFEECMSKHCGVVAMGLLAESGI-IQTAPLCEIEAYNRIEGFGIFVTVRVVGRVSLLELTQQEPYIKAVCRELSDVI 191          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2393.6473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVI4_9PHAE1.280e-6659.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHT0_ECTSI2.680e-3758.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2BRE0_9EUKA1.930e-2140.71Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A7S2UQX1_9STRA2.190e-2138.46Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A7S0LS06_9EUKA9.780e-2032.94Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S3X878_EMIHU1.220e-1938.46Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
B7FQF4_PHATC3.820e-1937.86Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S0TK28_HEMAN1.040e-1844.83Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
R1E1S0_EMIHU1.040e-1838.46Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A7S4R6W7_9STRA7.890e-1841.67Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.130.40coord: 74..182
e-value: 5.6E-9
score: 37.5
NoneNo IPR availablePANTHERPTHR46732:SF4coord: 81..186
NoneNo IPR availablePANTHERPTHR46732FAMILY NOT NAMEDcoord: 81..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..209
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..22
NoneNo IPR availableTMHMMTMhelixcoord: 13..30
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 87..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2393contigH-paniculata_contig2393:385..12550 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2393.6473.1mRNA_H-paniculata_contig2393.6473.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2393 385..12573 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2393.6473.1 ID=prot_H-paniculata_contig2393.6473.1|Name=mRNA_H-paniculata_contig2393.6473.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=210bp
MRVLKPSRRSLKCSFIVTVSLAMGAGGFLANPGARGGLGQSRWISPFIRT
TANSIWRERFFSTTLHGVKEWKAGQPDDLRHLGFLPFPVDDVMCPGETKD
LHLYEARFLALFENAIKNHGGCVGGAIFVDDGVLVRVGQLCDIISWNREQ
VGVSVALRCVGRVEIADMIAVEPYISATVREVNDFVGAESNVDGDNDEVS
ADVRERSNG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015947PUA-like_sf