prot_H-paniculata_contig2391.6465.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2391.6465.1
Unique Nameprot_H-paniculata_contig2391.6465.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1577
Homology
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BLAST of mRNA_H-paniculata_contig2391.6465.1 vs. uniprot
Match: A0A6H5KA79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA79_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 6.840e-48
Identity = 141/278 (50.72%), Postives = 161/278 (57.91%), Query Frame = 0 
Query: 1084 LAETGSAAEDLSKEQLEVTRELSTERDELYEENQRYNERLGELTSALREVREEKARLENQVFDRERGLEALRARADVERFKVARLQTEVEKAQVVCREMTDRLVELQEAQTELGNARDSLAKAXXXXXAXXXXXXXXXXXXXXXCRTRGDLENARRATSEMSARAAEAEGRAEXXXXXXXXXXXXXXALQHELDQVPKDLLVAHAEKRVLQGALDHA-------EASAEAEIRRRDADIRSFASAAALEQERYGKRLREQALTIHQLTLQGFSVEAQA 1354
            LAE GS AE LSKEQLE+TR+LS ERDEL EEN+R + RL +LT+AL+E REEK RL NQ+ DRERGLEALRA++DVER K ARLQ EV KAQ VCREM+ RL+ELQ  Q EL + R  L +A                                        RA  AE  AE              ALQ +LD+VP DLLVAHAEKRVLQGAL+ A       EA+  AE+RRRD                   RLREQALTIHQLTL+GFS EA A
Sbjct: 1463 LAEAGSEAEALSKEQLEITRQLSAERDELVEENERLSTRLDQLTTALQEQREEKGRLTNQLLDRERGLEALRAQSDVERVKAARLQEEVGKAQEVCREMSGRLLELQATQDELRDTRQGLDQASKDLETLRRSKDNLAGGWDEAAXXXXXXXXXXXXXXXXXXRANAAEPLAEEESRRARHLEARVNALQRQLDEVPNDLLVAHAEKRVLQGALERAKSDAADVEAATAAELRRRDXXXXXXXXXXXXXXXXXXXRLREQALTIHQLTLEGFSAEAAA 1740
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BLAST of mRNA_H-paniculata_contig2391.6465.1 vs. uniprot
Match: D7FYF0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF0_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 1.970e-43
Identity = 160/279 (57.35%), Postives = 183/279 (65.59%), Query Frame = 0 
Query: 1074 VEALESALDRLAETGSAAEDLSKEQLEVTRELSTERDELYEENQRYNERLGELTSALREVREEKARLENQVFDRERGLEALRARADVERFKVARLQTEVEKAQVVCREMTDRLVELQEAQTELGNARDSLAKAXXXXXAXXXXXXXXXXXXXXXCRTRGDLENARRATSEMSARAAEAEGRAEXXXXXXXXXXXXXXALQHELDQVPKDLLVAHAEKRVLQGALDHAEASAEAEIRRRDADIRSFASAAALEQERYGKRLREQALTIHQLTLQGFSVEA 1352
            VEALE+AL++LAE GS AE LSKEQLE+TR+LS ERDEL EEN+R + RL +LT+AL+E REEK RL NQ+ DRERGLEALRA+ DVER K ARLQ EV KAQ VCREM+DRL+ELQ  Q EL + R  L +AXXXXX XXXXXXXXXXXXXXX                             XXXXXX        ALQ +LD                       EA+  AE+RRRDAD R+ ASAAAL+Q R  +RLREQALTIHQLTL+GFS EA
Sbjct: 1370 VEALEAALEKLAEAGSEAEALSKEQLEITRQLSAERDELVEENERSSTRLDQLTTALQEQREEKGRLTNQLLDRERGLEALRAQGDVERVKAARLQEEVGKAQEVCREMSDRLLELQATQDELRDTRQGLDQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHLEARVNALQRQLD-----------------------EAATAAELRRRDADARNMASAAALQQRRCDERLREQALTIHQLTLEGFSAEA 1625
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2391.6465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KA79_9PHAE6.840e-4850.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF0_ECTSI1.970e-4357.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1034..1065
NoneNo IPR availableCOILSCoilCoilcoord: 113..133
NoneNo IPR availableCOILSCoilCoilcoord: 6..33
NoneNo IPR availableCOILSCoilCoilcoord: 1102..1143
NoneNo IPR availableCOILSCoilCoilcoord: 1234..1282
NoneNo IPR availableCOILSCoilCoilcoord: 1001..1032
NoneNo IPR availableCOILSCoilCoilcoord: 1067..1097
NoneNo IPR availableCOILSCoilCoilcoord: 1151..1223
NoneNo IPR availableCOILSCoilCoilcoord: 899..954
NoneNo IPR availablePANTHERPTHR18921:SF2THYROID RECEPTOR-INTERACTING PROTEIN 11coord: 56..995
NoneNo IPR availablePANTHERPTHR18921MYOSIN HEAVY CHAIN - RELATEDcoord: 56..995

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2391contigH-paniculata_contig2391:2142..18521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2391.6465.1mRNA_H-paniculata_contig2391.6465.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2391 1735..18624 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2391.6465.1 ID=prot_H-paniculata_contig2391.6465.1|Name=mRNA_H-paniculata_contig2391.6465.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1577bp
MAGAASEKLEAQLKEASAENDQLAAAAAREKKMLQSQWLRREDAWRLALQ
RAQQQQQQPPSPQLQPQPDRENGGGEHDAREGTELEAVLTEVEKLQATAI
GLSRDKEGLLRSLTVARQQLQEQHGQRQQQQQQQQRSRRRRRPSTPTHES
SSSAWRAPAAVTTKDKLRKYTNDDSGGEIFDVSSDDARSCSVRDREDNTG
VMPGEEGQCFGDGRDRSCSHSSYSRSGSRRISDHDVDGDDLDESNQGGGG
GEGGGTTTATPRTMTMTPLLTPGSSPNSNHRSRRGGRRQPLGNVLASSGP
QQQQYRQQQQQQGGGGEGRGSFTTRTPPGQNLAQRLASLPYSRTRTDSHC
CCCDDSSGGLKPESVADYCHCGLQSAATLTASKTRTEAMRVARAPCTEGV
NEEVVGNVREREGGAVEGAPAEPRMAEVLRGEGGTVGNDGDIDDSDDDDD
HHDEEEEALAPRGGPAPVPSPLMTLRRSGGGGGEGGSVRPAETPVTAVAL
LRSTLGKERDQRLREHTTLLDLLRRIEERAGKQRRQGEHGGAETSTSSSI
NSSNSGGGGSGVSLNASSHEQTDLKPRKVDIRDPTCGDEDHQHQHQRQRH
QQHCKKTPDSGVIEHGVEEHNNDAIHRPPVAAAAAAASMDAWQGGGPLPA
PPLPLSSEAWRGVLAALERLLWDTKIAENSVPGRQGLRQSGHRDRRQQCS
CFFGETTGGDDSSGGSEMMTIREGGQGGEDWSPSTDGGRRDATLPEGTPN
QYDGSSGATSENNISSVLTSALRELLATTPSAPGAASGGGQEEDEEGSMR
LGEASLPELITALRREWDSLLEGMEAMQEELQIVRDQVVATTYSSVNRVD
AATTTSQEFQQHLDPQQQQQQCRQRFGRSVSSAAAVGASATAAAAAEAQG
QAQAQAAAERRRAANLERALYCAEETRAAVESALREAEERLAASEGERSV
ATEQLASALQANAAERSSMEAERSAVSTERSAERSAAAAAAASSAAVTTA
LRRALEDRDRVAEKLRDAAEAADAARRQAEEMLRGCARDEMEKRRREVER
AERAAKDKVAAAREEGRREAQLRVEALESALDRLAETGSAAEDLSKEQLE
VTRELSTERDELYEENQRYNERLGELTSALREVREEKARLENQVFDRERG
LEALRARADVERFKVARLQTEVEKAQVVCREMTDRLVELQEAQTELGNAR
DSLAKANQELEAFRKFRDELSAASEEACRTRGDLENARRATSEMSARAAE
AEGRAEEASLRANQLEARAEALQHELDQVPKDLLVAHAEKRVLQGALDHA
EASAEAEIRRRDADIRSFASAAALEQERYGKRLREQALTIHQLTLQGFSV
EAQAAAAAASAAEAVSKAPPSYVGQASVRGGGVAGGWGPSGDWRWGSGAS
KQRGIASGTTARLPPPHMEDLYVEGKRRCRGRGKVDDDCRAHLSGAMKCD
AATDDAAADGGGGGNGGGNGGGDGGSGRQGLGPPQHALDSGFPGPLPLLP
PRPTVGVGAPEGGRYRRDVESGGCVGGRESQGGASRQSVGVRARPSWPDP
GVKSSNRGGRSYRDSIGGREDQRRDR*
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