mRNA_H-paniculata_contig237.6402.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig237.6402.1
Unique NamemRNA_H-paniculata_contig237.6402.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig237.6402.1 vs. uniprot
Match: D7FL12_ECTSI (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL12_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 1.310e-72
Identity = 125/250 (50.00%), Postives = 171/250 (68.40%), Query Frame = 3 
Query:    3 RYDEVWVLPVYVHMFASKRNDMENNSSVTYDDRVEMCRLAFERHSTKTTKVVVTRAEQEVFLWNQKELKNSGAGKSGKARTSSYDLVQFLMAKHPGVEFSFLVGTDTYQDLKMGKWRNSEELLQIVNMVVVDRLGVKPDTEDLLATVEVHHPPMLTDISSTKIRTASVEEL-ESTLAIDPPVLEYMRRNRLFAFGRQ------------RKTIVRGIPRSWLLVAGATGAAFVLGIA-IIGRSRRKGSHG 710
            R+ E+WVLPVY HMF++KR  M    + TY+DR+EMCRLAFE +ST + +V V R EQEVF     E+ NS    +G AR+S+YD+V +L  +HP VEFS L+GTDTYQDL+ GKWR SEEL+ +V++ +VDR+GV+P+TE+LL+ VE+HHPP+LTD+SSTKIR A  E+L E TLA++  VL YM+ +RL+ FGRQ            R + V    R W+++AG       +G+  ++GR R  G  G
Sbjct:   35 RFSEIWVLPVYQHMFSAKRKAMAKTGAPTYEDRIEMCRLAFESYSTASCRVRVLRTEQEVFA----EMLNSRG--TGPARSSTYDVVVYLKKQHPDVEFSLLLGTDTYQDLRKGKWRKSEELMNMVSLAIVDRMGVRPETENLLSGVELHHPPLLTDVSSTKIRDARAEDLLEGTLAVETSVLRYMKDHRLYGFGRQSRLENVLVAASERFSSVFSEERRWMVIAGTAAVVVTVGVLRVVGRFRDGGIRG 278
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BLAST of mRNA_H-paniculata_contig237.6402.1 vs. uniprot
Match: A0A835ZEG0_9STRA (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEG0_9STRA)

HSP 1 Score: 145 bits (367), Expect = 6.800e-37
Identity = 78/197 (39.59%), Postives = 115/197 (58.38%), Query Frame = 3 
Query:    6 YDEVWVLPVYVHMFASKRNDMENNSSVTYDDRVEMCRLAFERHSTKTTKVVVTRAEQEVFLWNQKELKNSGAGKSGKARTSSYDLVQFLMAKHPGVEFSFLVGTDTYQDLKMGKWRNSEELLQIVNMVVVDRLGVKPDTEDLLATVEVHHPPMLTDISSTKIRTAS-VEELESTLAIDPPVLEYMRRNRLFAFGRQR 593
            YDE+W++PVY HMF+ KR  M    + T+D R+EMC+LAFE+ S  T  V     E+EVF  +     +       + R  +YD++++L  +HP  EFSF++G D Y DL  GKW +S+ELL     VVVDR GV P  + +     +HH   LT +SS+ +R +  +  L+   A+   V  YM+ + L+AFGR+R
Sbjct:   46 YDEIWIMPVYRHMFSHKRTSMSQPGAATFDQRLEMCKLAFEQESCDTCCVKALPTEREVF--DMLAAADPDPHAVERIRVCTYDVLKYLRKQHPDAEFSFVLGMDAYVDLLKGKWAHSKELLDETEFVVVDRRGVMPHHDAVPHGTHIHHVGDLTAVSSSAVRASDDLAFLQDPTALHHAVYSYMQAHGLYAFGRRR 240
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BLAST of mRNA_H-paniculata_contig237.6402.1 vs. uniprot
Match: A0A7S2XWH9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWH9_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.280e-31
Identity = 88/234 (37.61%), Postives = 134/234 (57.26%), Query Frame = 3 
Query:    6 YDEVWVLPVYVHMFASKRNDMENNSSVTYDDRVEMCRLAFERHSTKTTKVVVTRAEQEVFLWNQKELKNSGAGKS-----GKA-RTSSYDLVQFLMAKHPGVEFSFLVGTDTYQDLKMGKWRNSEELLQIVNMVVVDRLGVKPDTE----DLLATVEVHHPPMLTDISSTKIRTASVEELESTLAIDPPVLEYMRRNRLFAFGRQRKTIVRGIPRSWLLVAGATG--AAFVLGI 671
            +DE+ V+PVY HMF  KR  +     V Y+ RVEMC+L F   ST+  KV ++  EQ+VF   QK+L+  GAG       G+A +  + D+V  L+  +PGV++ F+VGTDTY+DL   KWR ++ELL +++  VV+R G+    E     L A V+ H    L +ISST  R++S +E E    +   V++Y+  NRL+ F   +K       R  +L+  + G  +AF+ G+
Sbjct:   36 FDEILVVPVYTHMFQEKRGKV----MVDYEKRVEMCKLCFLDASTQQCKVRISLVEQQVF---QKKLREGGAGSGSGSPPGEAVKVGTADVVDHLVQDNPGVDYGFVVGTDTYRDLCNLKWRRAKELLDLLHFQVVERKGLPSPAEIPVQRLPARVDFHTLHELKEISSTSCRSSS-DECEVRKVVKSNVVDYIVSNRLYGFTEDKKHHQMNRNRKSVLIFASIGIVSAFIFGM 261
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BLAST of mRNA_H-paniculata_contig237.6402.1 vs. uniprot
Match: H3GJQ3_PHYRM (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJQ3_PHYRM)

HSP 1 Score: 130 bits (326), Expect = 1.410e-31
Identity = 80/198 (40.40%), Postives = 118/198 (59.60%), Query Frame = 3 
Query:    6 YDEVWVLPVYVHMFASKRNDMENNSSVTYDDRVEMCRLAFE---RHSTKTTKVVVTRAEQEVFLWNQKELKNSGAGKSGKARTSSYDLVQFLMAKHPGVEFSFLVGTDTYQDLKMGKWRNSEELLQIVNMVVVDRLGV-KPDTEDLLAT-VEVHHPPMLTDISSTKIR-TASVEELESTLAIDPPVLEYMRRNRLFAF 581
            YDE+W+LPVY H+++SKR          ++ R+EMCRLA E   R    + ++ V + E+E+F     E   + +    + R  S DLV +++ KHP   F+ L+G DTY DL  GKW+   EL+Q+V ++VVDR GV  P  E   A  V+  H P L+D+SST +R T+   ELE  L  DP VL+Y+ +++L+AF
Sbjct:   35 YDEIWLLPVYQHIYSSKRE------LAPFEHRLEMCRLALETLQRDGDASARLKVVQEEREMF-----EYAAAASDSLEQLRLGSIDLVHYMLDKHPDTSFTMLLGGDTYADLLAGKWKRGNELMQLVKLLVVDRKGVASPWREGQTADRVKYLHVPELSDVSSTMVRATSDRAELEKLL--DPAVLDYIVQHKLYAF 219
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BLAST of mRNA_H-paniculata_contig237.6402.1 vs. uniprot
Match: D0MV58_PHYIT (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MV58_PHYIT)

HSP 1 Score: 126 bits (316), Expect = 3.410e-30
Identity = 76/204 (37.25%), Postives = 114/204 (55.88%), Query Frame = 3 
Query:    6 YDEVWVLPVYVHMFASKRNDMENNSSVTYDDRVEMCRLAFE---RHSTKTTKVVVTRAEQEVFLWNQKELKNSGAGKSGKARTSSYDLVQFLMAKHPGVEFSFLVGTDTYQDLKMGKWRNSEELLQIVNMVVVDRLGV------KPDTEDLLATVEVHHPPMLTDISSTKIRTASVEELESTLAIDPPVLEYMRRNRLFAFGRQ 590
            YDE+W+LPVY H+++SKR          ++ RVEMCRLA E         T++ V   E+E+F     E   +  G     R  S DL+ +L+  H    F+ L+G DTY DL  GKW+   EL+Q+V ++VVDR G       + DTED +  + V   P L+D+SST +R A+ +  E    +DP VL+Y+ +++L+AF  +
Sbjct:   32 YDEIWLLPVYQHIYSSKRQ------LAPFEHRVEMCRLALEALKNDGDDGTQLKVVEEEREMF-----EFMAAKRGNPEDLRLGSIDLLDYLLDSHEDTNFTLLLGGDTYADLLAGKWKRGNELMQLVKLLVVDRKGTDSPWRDQHDTEDRVTYINV---PELSDVSSTMVR-ATADRAELARHLDPTVLDYIVQHKLYAFATE 220
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BLAST of mRNA_H-paniculata_contig237.6402.1 vs. uniprot
Match: A0A3M6VBK9_9STRA (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBK9_9STRA)

HSP 1 Score: 125 bits (315), Expect = 6.150e-30
Identity = 78/201 (38.81%), Postives = 117/201 (58.21%), Query Frame = 3 
Query:    6 YDEVWVLPVYVHMFASKRNDMENNSSVTYDDRVEMCRLAFERHSTKTTKVVVTRAEQEVFLWNQKELKNSGAGKSG--KARTSSYDLVQFLMAKHPGVEFSFLVGTDTYQDLKMGKWRNSEELLQIVNMVVVDRLGV-------KPDTEDLLATVEVHHPPMLTDISSTKIRTASVEELESTLAIDPPVLEYMRRNRLFAF 581
            YDE+W+LPVY H+++SKR          +  RVEMCRLA E   +K        AE +V    ++ ++N  A      + R  S DLVQ+L+ K+P + F+ L+G DTY DL  GKW+  +E++Q V ++VVDR GV       K   E     V+  H P L+D+SST +R A+ ++ E  L +DP VL+Y+ +++L+AF
Sbjct:   36 YDEIWLLPVYQHIYSSKRQ------LAPFKHRVEMCRLALETLQSKEN----DGAELKVVEEEREMIENFAAKNQSPQELRLGSIDLVQYLLDKYPDMSFTMLLGGDTYADLLAGKWKRGDEIMQYVKVLVVDREGVESPWRGEKEKKEGQEDRVQYIHIPELSDVSSTIVR-ATADQKELGLYLDPAVLDYIVQHQLYAF 225
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BLAST of mRNA_H-paniculata_contig237.6402.1 vs. uniprot
Match: A0A6A3F4I0_9STRA (Nicotinamide-nucleotide adenylyltransferase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F4I0_9STRA)

HSP 1 Score: 124 bits (310), Expect = 2.510e-29
Identity = 78/198 (39.39%), Postives = 115/198 (58.08%), Query Frame = 3 
Query:    6 YDEVWVLPVYVHMFASKRNDMENNSSVTYDDRVEMCRLAFE---RHSTKTTKVVVTRAEQEVFLWNQKELKNSGAGKSGKARTSSYDLVQFLMAKHPGVEFSFLVGTDTYQDLKMGKWRNSEELLQIVNMVVVDRLGVKPDTEDLLATVEVH--HPPMLTDISSTKIRTASVE-ELESTLAIDPPVLEYMRRNRLFAF 581
            +DE+W+LPVY H+++SKR          +  R+EMCRLA E   R       + V + E+E+F     EL  + +  + + R  S DLV +L+ K+    F+ L+G DTY DL  GKW+  +EL+Q+V ++VVDR GV+    D      V   H P L+D+SSTK+R A+   ELE  L  DP VL+Y+  ++L+AF
Sbjct:   33 FDEIWLLPVYQHIYSSKRQ------LAPFAHRLEMCRLALETLQREDGAGAALKVVQEEREMF-----ELVAAASDGAEQPRLGSLDLVLYLLDKYRDTNFTMLLGGDTYADLLAGKWKRGDELMQLVKLLVVDRQGVESPWRDQQEQERVKYLHVPELSDVSSTKVRAAADRSELEKHL--DPAVLDYIVEHKLYAF 217
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BLAST of mRNA_H-paniculata_contig237.6402.1 vs. uniprot
Match: A0A7S1XRJ1_9STRA (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRJ1_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.720e-28
Identity = 76/196 (38.78%), Postives = 111/196 (56.63%), Query Frame = 3 
Query:    6 YDEVWVLPVYVHMFASKRNDMENNSSVTYDDRVEMCRLAFERHSTKTTKVVVTRAEQEVFLWNQKELKNSGAGKSGKARTSSYDLVQFLMAKHPGVEFSFLVGTDTYQDLKMGKWRNSEELLQIVNMVVVDR--LGVKPDTEDLLATVEVHHPPMLTDISSTKIRTASVEELESTLAIDPPVLEYMRRNRLFAFGR 587
            +D +WVLPVYVHM  SKRN +E      ++ RV MCR+AFE   + +  V V   E+ V    ++ LK  G   SG AR  + D++  L A +PG +FSF++G DTY+DL+ G WR S+ELL+ +N VV  R  + V P  +D L            D+SS+K+   S +       ++P VLEYM+ + L+  G+
Sbjct:   40 FDAIWVLPVYVHMLDSKRNKLEK-----FEHRVAMCRMAFEHLGSASCPVGVKEIERIVV---ERRLKQRGG--SGVARVGTADVLDHLSAAYPGTDFSFVMGADTYRDLRAGVWRRSDELLRRLNFVVFPRGDIEVHPRPQDTLLAAASGWG----DVSSSKVAAGS-DTSYLRAVLNPNVLEYMQEHELYTLGK 220
[Close]
BLAST of mRNA_H-paniculata_contig237.6402.1 vs. uniprot
Match: G4ZH97_PHYSP (Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZH97_PHYSP)

HSP 1 Score: 121 bits (304), Expect = 1.980e-28
Identity = 78/202 (38.61%), Postives = 113/202 (55.94%), Query Frame = 3 
Query:    6 YDEVWVLPVYVHMFASKRNDMENNSSVTYDDRVEMCRLAFE---RHSTKTTKVVVTRAEQEVFLWNQKELKNSGAGKSGKARTSSYDLVQFLMAKHPGVEFSFLVGTDTYQDLKMGKWRNSEELLQIVNMVVVDRLGVKPDTED------LLATVEVHHPPMLTDISSTKIR-TASVEELESTLAIDPPVLEYMRRNRLFAF 581
            +DE+W+LPVY H+++SKR          ++ RVEMCRL  E   R       + V + E+E+F     E   + +  + + R  S DLV +L  K+    F+ L+G DTY DL  GKW+  +EL+Q+V ++VVDR GV+    D          V+  H P L+D+SSTK+R TA   ELE  L  DP VL Y+  ++L+AF
Sbjct:   33 FDEIWLLPVYQHIYSSKRQ------LAPFEHRVEMCRLVLESLQRADDAGAALRVVQEEREMF-----ERAAAASDNAEQLRLGSIDLVLYLRDKYRDTSFTMLLGGDTYADLLAGKWKRGDELMQLVKLLVVDRKGVESPWRDKQEXXXXXXRVKYLHVPELSDVSSTKVRATADRTELEQHL--DPAVLNYIVEHKLYAF 221
[Close]
BLAST of mRNA_H-paniculata_contig237.6402.1 vs. uniprot
Match: V9F0U9_PHYPR (Nicotinamide-nucleotide adenylyltransferase n=9 Tax=Phytophthora TaxID=4783 RepID=V9F0U9_PHYPR)

HSP 1 Score: 121 bits (303), Expect = 2.890e-28
Identity = 73/204 (35.78%), Postives = 116/204 (56.86%), Query Frame = 3 
Query:    6 YDEVWVLPVYVHMFASKRNDMENNSSVTYDDRVEMCRLAFERHSTKT---TKVVVTRAEQEVFLWNQKELKNSGAGKSGKARTSSYDLVQFLMAKHPGVEFSFLVGTDTYQDLKMGKWRNSEELLQIVNMVVVDRLGV------KPDTEDLLATVEVHHPPMLTDISSTKIRTASVEELESTLAIDPPVLEYMRRNRLFAFGRQ 590
            YDE+W+LPVY H+++SKR          ++ RV MCRLA +  S +     K+ V   E+E+F     E   + +    + R  S D++ +L+ KH    F+ L+G DTY DL  GKW+  +EL+Q+V ++VVDR GV      +  TED +  + V   P L+D+SST +R A+ +  E    + P VL+Y+ +++L+AF  +
Sbjct:   39 YDEIWLLPVYQHIYSSKRQ------LAPFEHRVAMCRLALKTLSDEDDDGAKLKVVEEEREMF-----EHMAAQSDSPEQLRLGSIDMIHYLLNKHEDTNFTMLLGGDTYADLLAGKWKRGDELMQLVKLLVVDRKGVDSPWRDQQTTEDRVTCINV---PELSDVSSTMVR-ATADRAELARHLSPAVLDYIVQHKLYAFATE 227
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig237.6402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL12_ECTSI1.310e-7250.00Nicotinamide-nucleotide adenylyltransferase n=2 Ta... [more]
A0A835ZEG0_9STRA6.800e-3739.59Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
A0A7S2XWH9_9STRA1.280e-3137.61Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
H3GJQ3_PHYRM1.410e-3140.40Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
D0MV58_PHYIT3.410e-3037.25Nicotinamide-nucleotide adenylyltransferase n=2 Ta... [more]
A0A3M6VBK9_9STRA6.150e-3038.81Nicotinamide-nucleotide adenylyltransferase n=2 Ta... [more]
A0A6A3F4I0_9STRA2.510e-2939.39Nicotinamide-nucleotide adenylyltransferase n=2 Ta... [more]
A0A7S1XRJ1_9STRA1.720e-2838.78Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
G4ZH97_PHYSP1.980e-2838.61Nicotinamide-nucleotide adenylyltransferase n=1 Ta... [more]
V9F0U9_PHYPR2.890e-2835.78Nicotinamide-nucleotide adenylyltransferase n=9 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig237contigH-paniculata_contig237:3379..8699 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score218.0
Seed ortholog evalue4.5e-54
Seed eggNOG ortholog2880.D7FL12
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Cytidylyltransferase-like
EggNOG OGs2RY55@2759,COG1057@1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1352
Cds size678
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig237.6402.1prot_H-paniculata_contig237.6402.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig237 3420..8066 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929674.5321505-UTR-H-paniculata_contig237:3378..34191622929674.5321505-UTR-H-paniculata_contig237:3378..3419Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig237 3379..3419 +
1691480961.8022053-UTR-H-paniculata_contig237:3378..34191691480961.8022053-UTR-H-paniculata_contig237:3378..3419Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig237 3379..3419 +
1622929674.6466577-UTR-H-paniculata_contig237:8066..86991622929674.6466577-UTR-H-paniculata_contig237:8066..8699Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig237 8067..8699 +
1691480961.8766575-UTR-H-paniculata_contig237:8066..86991691480961.8766575-UTR-H-paniculata_contig237:8066..8699Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig237 8067..8699 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929674.5430994-CDS-H-paniculata_contig237:3419..34931622929674.5430994-CDS-H-paniculata_contig237:3419..3493Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig237 3420..3493 +
1691480961.8149261-CDS-H-paniculata_contig237:3419..34931691480961.8149261-CDS-H-paniculata_contig237:3419..3493Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig237 3420..3493 +
1622929674.5570219-CDS-H-paniculata_contig237:4582..46991622929674.5570219-CDS-H-paniculata_contig237:4582..4699Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig237 4583..4699 +
1691480961.8258164-CDS-H-paniculata_contig237:4582..46991691480961.8258164-CDS-H-paniculata_contig237:4582..4699Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig237 4583..4699 +
1622929674.571637-CDS-H-paniculata_contig237:5209..52731622929674.571637-CDS-H-paniculata_contig237:5209..5273Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig237 5210..5273 +
1691480961.837423-CDS-H-paniculata_contig237:5209..52731691480961.837423-CDS-H-paniculata_contig237:5209..5273Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig237 5210..5273 +
1622929674.5949085-CDS-H-paniculata_contig237:6205..63081622929674.5949085-CDS-H-paniculata_contig237:6205..6308Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig237 6206..6308 +
1691480961.8468993-CDS-H-paniculata_contig237:6205..63081691480961.8468993-CDS-H-paniculata_contig237:6205..6308Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig237 6206..6308 +
1622929674.6063647-CDS-H-paniculata_contig237:7111..72241622929674.6063647-CDS-H-paniculata_contig237:7111..7224Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig237 7112..7224 +
1691480961.8566558-CDS-H-paniculata_contig237:7111..72241691480961.8566558-CDS-H-paniculata_contig237:7111..7224Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig237 7112..7224 +
1622929674.6209846-CDS-H-paniculata_contig237:7859..80661622929674.6209846-CDS-H-paniculata_contig237:7859..8066Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig237 7860..8066 +
1691480961.866038-CDS-H-paniculata_contig237:7859..80661691480961.866038-CDS-H-paniculata_contig237:7859..8066Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig237 7860..8066 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig237.6402.1

>prot_H-paniculata_contig237.6402.1 ID=prot_H-paniculata_contig237.6402.1|Name=mRNA_H-paniculata_contig237.6402.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp
MFASKRNDMENNSSVTYDDRVEMCRLAFERHSTKTTKVVVTRAEQEVFLW
NQKELKNSGAGKSGKARTSSYDLVQFLMAKHPGVEFSFLVGTDTYQDLKM
GKWRNSEELLQIVNMVVVDRLGVKPDTEDLLATVEVHHPPMLTDISSTKI
RTASVEELESTLAIDPPVLEYMRRNRLFAFGRQRKTIVRGIPRSWLLVAG
ATGAAFVLGIAIIGRSRRKGSHGRG*
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mRNA from alignment at H-paniculata_contig237:3379..8699+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig237.6402.1 ID=mRNA_H-paniculata_contig237.6402.1|Name=mRNA_H-paniculata_contig237.6402.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5321bp|location=Sequence derived from alignment at H-paniculata_contig237:3379..8699+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACGATACGACGAGGTATGGGTGCTTCCCGTATACGTGCACATGTTCGCA
TCGAAGCGAAATGACATGGAGAATAACAGCTCTGTCACCTACGACGACAG
GGTGGAAATGTGTCGGTGAGGTTTTCAACTTTTATGACGCAACGGAGTTC
AGACTGTCTGTTGCGATAAACGGTAAAAACCCACACTGATGCATGTACGT
GGATTGTGCTGATAACGTGAGATGAATATCGGCCGAGTTAGAAATGGCAT
AGGAAAGCTGTAACCTCGTGGTGTAAGCATTCAGCATTTCTTTCCCTGCC
TTGATCTCCTGGGAAGCTAGAAAAACAAAAATAAAACTAGTTCAGCATGC
AACACAATGCAAGCAAGTTAGGAGACTTGTTAGAGCTGGTATCGCTGTGC
ATTCGCCCCAAGTGAATATTTCAGCCTGTCGTGGTCTCGATTGGATACTC
CTTTCCGTGTTTTTTCAGCCAAAAACTCGTCTGAGCTGATGATAAATCTC
TCCTCTGTTTGACGAGATAGATGGCTTGATCGAAAATGGCCGTGCGCGCT
ATCCGTTCACTTGAATTGAACCATTTGTGTATTTACTGTAAGCAGCAGTT
TTCATCCCCGCCGCCTGCCGCCCGCCCCTCGCCCTGCTTCGCACTTCATC
ATATTGTCAGCACTTGTGCCTACTCGTTGAGGCGCAAGCGGTTTTGTTCT
GGGCTTGACGTACACAGTACAAAATATAAAATATTACGTGTTCGTCAAAG
CGTATTTATTTAACCCTAAGTATTGCTACCTTCTTCGTGCTCATTGTCCT
GTAGTATCCAATCCTATTTTGGACACGTTTTCAAAGACTGTCACAGTACA
GCACCAGTGCCAGTAAATACCCAGCATGATGGTCTTGATTCAGTACATTA
TATTGGACTTGATAAAAAAGAGAATGGCAAGGAGGGAAGGAGGAGATACA
TGGGGAGGGGATACCCAGTATTTTCGGGCCGATATTTTTATCAAGTCTAT
TATATTTAAATCGGTCCAGTAAGTGGGCAGTATACTGTCTGCTGCGCTGT
ACTGACTGTAACGAGTCTGACTTACTTTCATCTTTGCTATTGAACTTCCT
TGCCTCTCGCGCCGCTGTTACCTCCGGACGTTGTAAAATATGCGGGCTGC
CTTGTGCTGCCGTGCCGTGCCGTGCGAAATTGCGCTTTCTCCAACGCACA
CAAGGCTTGCCTTCGAAAGGCATTCTACCAAAACCACCAAAGTTGTCGTG
ACTCGCGCAGAGCAGGAAGTGTTCTTGTGGAACCAGAAGGAGCTAAAGAA
CAGTGGAGCTGGAAAGAGTGGGTGAGGCGCCCGGATCGGCGGCGGCGGTT
GAGCTCGCTAGCTGGACAGAAATATATCGCTCCAGAATTTGCTCTTCAAC
GTTTGGCACATCTTCCTCGCTTGATTGTGTTGTATGTTGTACTAGACGAG
GACCGACATTGCACAGCTAGACTAGAATCCACTCTTTGTGAAGAGTAATG
TTTACAGGCAAAGTATATAACGCCTCTCTGGGTTTATTTCTTGTGTTGTG
CAGACATGGTGATGGCCAGGGGTATGGGTGGTGAACCGATGTCGAGGCCT
TGTGTGTAGAATTACTGATGTATGGGAGCGCCGTAATGGAATGCCCTGTA
TGGCGTTATCAACCCGAACAAGAAAGGGAATAATATGAGCGCAGACATTC
ATGTTTTCTCATCCTCGATTGTCGTGAAATTTGCAATTGACTTTTGTCCC
CCGTCCCTGCCTACCTTGCCAACAAAACGTCAATGTATTCTTCGTCACCT
TGCTCTTGATGATGTTGTCTCTTATCGAAAGTAAAGCGCGTACGAGCAGC
TACGACCTGGTTCAGTTCCTAATGGCGAAGCACCCAGGTGTAGAGGTACG
TCTGGTGACATGTTCATGGTAACGGTTTTATAATTTTCCATCCCCCGGGA
CAAATACGAATACTTGTGTGTATTCGTCGCGAAAAGAAAAAAATAGTTCG
CCTGAGTTTCAGAATGAGCGGACACATGGAATAAAGTACCCACCCCTGCA
CATTCGTTTTATAAATATTATTAGCAATCGTGGATGATCCGGGGCACGTA
TCATACACAAGCTCATTTCTGAAAGTCAGGCAAATGCTTTTGAAGTTTTC
GTGGCGAATACGCCAAGTATTCGTATTTGTCCACGGGGCGAATTTTTTCT
TGTATGAGTGGTTTGCAAACATACTACGCGTGCCATTCAAGTCTGTGACT
GTGATTGCACACAACAGCAGCACAAAGCTTGACCTGCGATGCCGTTGTGG
GGGGGGGGAATGGACGGGAGTTGCCACAGTTGGTAGATCTATCACGCTCA
TATAATAACTCCATCGTACTCATGTCGAGGTAAGCTGTTTAGCTGACCTC
AAATATCAGTTTTGTATACTTTCCGGCAAACTCAAATTTAAGTACGAGGT
GCTGTCGAGATCACGATATGGCTCTGGCTCTGGTTATCGAACCACGTTTT
CGCAGTCCCTGTAGGTCGTACCCGTTTGCCCCGCGCAGCTATCCCGAAAA
TAAATATGGGCAGGTTTCTCATGTTTTTGTGGGGGACGGTGCGACTTGAA
TTGCGTATAACTGGTTTTGAAGCAATCAGGGATGGGCTGGTTGGTTTTTT
GCGGGGGGGGGCGAAGAAACGTCTCGGTAATTGACTTATTATCTCTTGTC
GTGTTCGTTTGTTGTATTCTCCTTGAACACTAATGCTTCCCTGCAGCTCT
TGGTCTCGCTGCGCTCACGATGTTCGTTGTTGTTGTTGCTGTTTTTGCTG
TCATCGTTGTTGTGTATTTCCTGACAGTTCTCTTTTTTGGTGGGCACAGA
CACGTACCAAGACCTGAAGATGGGAAAGTGGCGTAACTCCGAGGAGCTGT
TGCAAATTGTCAACATGGTAGTCGTTGACCGTGAGTGTGTGCGTACCAGT
CTCATTTTGTATTTTTATGTTGTCAACATGGCGATTCGTGATTATTTGTA
GCGACCTTTCGCGTAGGTAGTGGCACTTCTGACGGCTGTGTCGCATTCGT
TGTTGCAGGTGTCAATTATTACCATGGTTTGTATGTACACCTGCTGTGAT
TTTCAGCCAAGGGGTATACGTTGAGGGGGGCAGGTGATTCTCGTGGAATG
CAACGTGTGAGGGTGCTATGCGAGAAACAAGGATAACTGGACAACTGCTA
TTTTGTGTCGACTAACGCTGCTTTGGAACCGATAGGTCGATCTCCTGGGA
GGACAATCAATGAAAACCAACGGGAGATACGACTTTGGTCTTTCATGGGG
ATCTATGATACCCCCGTTCAAGGAAGTTTTGTGTCGTCCATAAGAACAGC
ATTAGCCGTTGTAGCAACGCGCACGTACGTGTTTGACTTCGTGTGCTTTG
TGGCTGTTTGTTGAGTCTGGACCTCCGCTATCGCTGCTGCAGGTCGTAAA
GCAATAATCCTGTGTGCTTTTGTTGGGTTCGAACCGCGTTCTGCTGGTAT
TTGATTGTAGCGTCTCTCCACTGTGTGGGATGAATGCATCAGGGTTGGGA
GCGAGGAGCTAGCTACGTTCTGTGTCGGTCGTTTTCTTTGAGGCTGTTAA
CGTTGATATGTAGACGCAAAAGCCTTTTTTCTTCAGTCGAGCTAGCCTTT
CGGTAACTGAAATAATTCCAGTCTTGTTTGCTCTCCGATACCGTTGTATG
GCGGCTGCTCGTTTCCTATTAATAATGCATCAGGACTCGGCGTGAAGCCA
GATACGGAGGACTTGCTGGCCACAGTCGAGGTGCACCACCCTCCAATGCT
CACTGACATCTCTTCTACCAAGATCAGAACCGCAAGCGTGGAAGAGGTGA
GGGGGACAGGGCAGGTGGAGGGGGGCGTCCTTATGTTTTGCGTACCTCAG
CCGTCAGACTCTCAGTTTTTCTATCTCACTGATGAGTGCATCTAACCATA
TTGTAGGCTAAATGGCCTCCGCCTCCGCTCAGGGGGAGGGGGGCGAGCAG
AGTAAGTGGAAAAGGTTGGGGGACGTCTGATCTGCGTATTTTGCTTACGG
CTTGGAATTGTAAGTGTAAGCAATCCACAGTAGAAATGACAACGTGAGAA
TTCTTGCGACCGCTGGTCCCGGCCGGGGCGGTGAAATTGTTCGAATTGTC
CGGTGACACAAGTGTAGCGTGTCTCCGTTTCTAGTCTGCTCGCGGTCCTG
TGCTCTCAACTATGTCGCAAAGTTCATGAAGGGTATGCGGCTATCAGCTC
GTCACGAGACGGGATGATGTGTTGCAGCATGGTGGGCCTCCTCCTGGGGT
CGTTTCCCCCCCCTACAAAATCCTTGCGCTCGCAACCGGTCGCCTCGCCT
CATACTTGACCCGTCTGTTCATTCAGGTCGTATATTCGCACGCTTTTTTG
TTTTCTTGTCTGACATTTTTTCCTGTGCCTCTCCCCTTCTTCACTCACCC
GTTGGGGAAAACGGCGAATTCTGCAACCCAGTTGGAGTCAACACTAGCGA
TCGATCCACCTGTCCTGGAGTACATGCGCCGAAATCGACTCTTCGCGTTT
GGGCGACAGCGTAAAACTATCGTCCGGGGAATTCCGCGGTCATGGCTACT
TGTCGCGGGGGCAACGGGGGCAGCGTTTGTCTTAGGAATAGCGATTATCG
GAAGGAGCCGACGGAAAGGGAGCCATGGACGAGGATGAACGGCACGGTTT
TGAACCCAAAAGAGCTTCTGTTGTATGCCTCAGGCGTTTTTGTTGAGAGG
GTCGGGTCAGGCGGCGAGCTGGAGGGGGGGGGGATGTAGACAAACAAGAG
TTGTTTTTTTCCTCCAAATTCTGGGTAATGCATTCACGTGGAATGTGAGA
TTTTTCCGGGGGCGTTTTCGTGTGCAGTGCTCTGATTATGTGAGTGTTGA
TTGGCTTTTTTTTTATTACTATTTTCAGGTGTCGGTGTTATAGACACGGT
GGTGCTTGACCAGGTTGTACTGTTACGTTGGTCTGGCAATGGAGGTTGTC
GATGGAGGGAGGCAGCCTTACTACCGCGGCTGTGTTTTTGTGGGCTTGCT
GGCATAGATTTTGCGTGAAAGAAGAGCGGTGCCGGAGGGACAGGGAATTG
TTCCTGGGTATTTTACGATGTTCACCATCAGGCTGTGATATAGGGTTGAT
GATCATATTAAATACATTCTGATATCCTGCAAAATAGGGTTGATCAATTG
ACAACACGGCGAAGATCATATCCTTTTGTGAGGCTCAAAATTGATTACTT
TTTCCAGTCAGAATATATAAACTTTGCCTGGGGCCATCTACTCTTGGAGA
CATGTCAGAATTGTCCTTCCC
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Coding sequence (CDS) from alignment at H-paniculata_contig237:3379..8699+

>mRNA_H-paniculata_contig237.6402.1 ID=mRNA_H-paniculata_contig237.6402.1|Name=mRNA_H-paniculata_contig237.6402.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1356bp|location=Sequence derived from alignment at H-paniculata_contig237:3379..8699+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTCGCATCGAAGCGAAATGACATGGAGAATAACAGCTCTGTCACCTA
CGACGACAGGGTGGAAATGTGTCGATGTTCGCATCGAAGCGAAATGACAT
GGAGAATAACAGCTCTGTCACCTACGACGACAGGGTGGAAATGTGTCGGC
TTGCCTTCGAAAGGCATTCTACCAAAACCACCAAAGTTGTCGTGACTCGC
GCAGAGCAGGAAGTGTTCTTGTGGAACCAGAAGGAGCTAAAGAACAGTGG
AGCTGGAAAGAGTGGGCTTGCCTTCGAAAGGCATTCTACCAAAACCACCA
AAGTTGTCGTGACTCGCGCAGAGCAGGAAGTGTTCTTGTGGAACCAGAAG
GAGCTAAAGAACAGTGGAGCTGGAAAGAGTGGTAAAGCGCGTACGAGCAG
CTACGACCTGGTTCAGTTCCTAATGGCGAAGCACCCAGGTGTAGAGTAAA
GCGCGTACGAGCAGCTACGACCTGGTTCAGTTCCTAATGGCGAAGCACCC
AGGTGTAGAGTTCTCTTTTTTGGTGGGCACAGACACGTACCAAGACCTGA
AGATGGGAAAGTGGCGTAACTCCGAGGAGCTGTTGCAAATTGTCAACATG
GTAGTCGTTGACCTTCTCTTTTTTGGTGGGCACAGACACGTACCAAGACC
TGAAGATGGGAAAGTGGCGTAACTCCGAGGAGCTGTTGCAAATTGTCAAC
ATGGTAGTCGTTGACCGACTCGGCGTGAAGCCAGATACGGAGGACTTGCT
GGCCACAGTCGAGGTGCACCACCCTCCAATGCTCACTGACATCTCTTCTA
CCAAGATCAGAACCGCAAGCGTGGAAGAGGACTCGGCGTGAAGCCAGATA
CGGAGGACTTGCTGGCCACAGTCGAGGTGCACCACCCTCCAATGCTCACT
GACATCTCTTCTACCAAGATCAGAACCGCAAGCGTGGAAGAGTTGGAGTC
AACACTAGCGATCGATCCACCTGTCCTGGAGTACATGCGCCGAAATCGAC
TCTTCGCGTTTGGGCGACAGCGTAAAACTATCGTCCGGGGAATTCCGCGG
TCATGGCTACTTGTCGCGGGGGCAACGGGGGCAGCGTTTGTCTTAGGAAT
AGCGATTATCGGAAGGAGCCGACGGAAAGGGAGCCATGGACGAGGATGAT
TGGAGTCAACACTAGCGATCGATCCACCTGTCCTGGAGTACATGCGCCGA
AATCGACTCTTCGCGTTTGGGCGACAGCGTAAAACTATCGTCCGGGGAAT
TCCGCGGTCATGGCTACTTGTCGCGGGGGCAACGGGGGCAGCGTTTGTCT
TAGGAATAGCGATTATCGGAAGGAGCCGACGGAAAGGGAGCCATGGACGA
GGATGA
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