prot_H-paniculata_contig23650.6393.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23650.6393.1
Unique Nameprot_H-paniculata_contig23650.6393.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length82
Homology
BLAST of mRNA_H-paniculata_contig23650.6393.1 vs. uniprot
Match: D8LPV2_ECTSI (Nucleotidyltransferase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV2_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 3.820e-29
Identity = 58/82 (70.73%), Postives = 68/82 (82.93%), Query Frame = 0
Query:    1 VTDVEKIPSKKVPLVKFVHAATKQQVDVCFEQQSGIESGLAARALMRQMAPVRPLVMVLKAYMSQRQINVTYHGFVGSFLLQ 82
            V +V  I S +VPLVKFVH  +  QVDVCF+Q+SG++SG AARA+MRQM PVRPLVMVLKAYM QR++N TYHG VGSFLLQ
Sbjct:  352 VREVTVIKSARVPLVKFVHVGSGVQVDVCFDQESGMKSGRAARAMMRQMQPVRPLVMVLKAYMGQRKLNETYHGGVGSFLLQ 433          
BLAST of mRNA_H-paniculata_contig23650.6393.1 vs. uniprot
Match: A0A6H5K966_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K966_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 2.610e-28
Identity = 56/82 (68.29%), Postives = 68/82 (82.93%), Query Frame = 0
Query:    1 VTDVEKIPSKKVPLVKFVHAATKQQVDVCFEQQSGIESGLAARALMRQMAPVRPLVMVLKAYMSQRQINVTYHGFVGSFLLQ 82
            V +V  I   +VPLVKFVH  +  QVDVCF+Q+SG++SG AARA+MRQM PVRPLVMVLKAYM+QR++N TYHG +GSFLLQ
Sbjct:  273 VREVTVIKKARVPLVKFVHVGSGVQVDVCFDQESGMQSGRAARAMMRQMQPVRPLVMVLKAYMAQRKLNETYHGGIGSFLLQ 354          
BLAST of mRNA_H-paniculata_contig23650.6393.1 vs. uniprot
Match: A0A7S3S2P8_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S2P8_EMIHU)

HSP 1 Score: 79.3 bits (194), Expect = 1.720e-15
Identity = 41/79 (51.90%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    3 DVEKIPSKKVPLVKFVHAATKQQVDVCFEQQSGIESGLAARALMRQMAPVRPLVMVLKAYMSQRQINVTYHGFVGSFLL 81
            +VE I S KVP+VK+V   +   VD+C EQQ GI S   A    RQ  P RPLV++LK Y+S R +N T+ G VGSFLL
Sbjct:  148 EVEVIGSAKVPIVKYVDGPSGLSVDLCLEQQDGIRSSALATKAARQFPPFRPLVLLLKRYLSSRGLNDTFTGGVGSFLL 226          
BLAST of mRNA_H-paniculata_contig23650.6393.1 vs. uniprot
Match: A0A7S3ZN42_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZN42_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.320e-15
Identity = 37/79 (46.84%), Postives = 57/79 (72.15%), Query Frame = 0
Query:    4 VEKIPSKKVPLVKFVHAATKQQVDVCFEQQSGIESGLAARALMRQMAPVRPLVMVLKAYMSQRQINVTYHGFVGSFLLQ 82
            +E + S ++PLVK+V AA+   VDV F+ +SG+ +G   R+ M  M P+RPLV+VLK +++QR +N T+ G VGS++LQ
Sbjct:  222 LEVVESARIPLVKYVDAASNTAVDVSFDVESGLRTGKLVRSYMDAMPPLRPLVLVLKFFLAQRGLNETFTGGVGSYMLQ 300          
BLAST of mRNA_H-paniculata_contig23650.6393.1 vs. uniprot
Match: A0A7S2EAC2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EAC2_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 3.500e-15
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0
Query:    4 VEKIPSKKVPLVKFVHAATKQQVDVCFEQQSGIESGLAARALMRQMAPVRPLVMVLKAYMSQRQINVTYHGFVGSFLLQ 82
            +E I + ++P+VKF HA T   VD+C  Q  G ES    +  M+ M P+RPL +VLK +M  R INV Y G VGSF+LQ
Sbjct:  283 LEVIGNTRIPIVKFTHAPTNLDVDICCNQTGGPESAELIKRFMQAMPPLRPLTIVLKYFMKSRAINVPYQGGVGSFMLQ 361          
BLAST of mRNA_H-paniculata_contig23650.6393.1 vs. uniprot
Match: A0A7S4DIS6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIS6_HETAK)

HSP 1 Score: 78.2 bits (191), Expect = 4.030e-15
Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 0
Query:    4 VEKIPSKKVPLVKFVHAATKQQVDVCFEQQSGIESGLAARALMRQMAPVRPLVMVLKAYMSQRQINVTYHGFVGSFLLQ 82
            +E I S ++P+VK  H  ++  VD+ F Q SG+ +G   +  MR+  PVRPL++V K ++ QR++N TY G VGSFLLQ
Sbjct:  181 LEVIDSARIPIVKLRHKESQVHVDISFNQPSGLATGACVQRFMRKFPPVRPLLLVAKKFLQQRELNETYTGGVGSFLLQ 259          
BLAST of mRNA_H-paniculata_contig23650.6393.1 vs. uniprot
Match: A0A7S2XW69_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW69_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.640e-14
Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    4 VEKIPSKKVPLVKFVHAATKQQVDVCFEQQSGIESGLAARALMRQMAPVRPLVMVLKAYMSQRQINVTYHGFVGSFLLQ 82
            +E +   ++PLVK  H  TK  +D+ F Q  G+E+G      +  + P+RPL++VLK +M QRQ+N T+ G VGSFLLQ
Sbjct:  157 IEVVSKARIPLVKVRHEETKVHLDISFGQPGGLETGALVNKFLSHLPPMRPLILVLKLFMVQRQLNETFLGGVGSFLLQ 235          
BLAST of mRNA_H-paniculata_contig23650.6393.1 vs. uniprot
Match: A0A0M0JJ68_9EUKA (Poly RNA polymerase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JJ68_9EUKA)

HSP 1 Score: 73.9 bits (180), Expect = 1.070e-13
Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 0
Query:    2 TDVEKIPSKKVPLVKFVHAATKQQVDVCFEQQSGIESGLAARALMRQMAPVRPLVMVLKAYMSQRQINVTYHGFVGSFLLQ 82
            T +E +   +VP+VKFV  AT   VD+C E+ +G++S   AR  + +     PLV+VLK +++ R ++ TYHG VGS+LLQ
Sbjct:   93 TQLEVVDKARVPIVKFVDGATGVAVDICLEELTGLQSSALARKALAKFPQYGPLVLVLKRWLNARGLHDTYHGGVGSYLLQ 173          
BLAST of mRNA_H-paniculata_contig23650.6393.1 vs. uniprot
Match: A0A7S0PKD2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PKD2_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.730e-13
Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 0
Query:    1 VTDVEKIPSKKVPLVKFVHAATKQQVDVCFEQQSGIESGLAARALMRQMAPVRPLVMVLKAYMSQRQINVTYHGFVGSFLLQ 82
            +T +E I + +VPLVKF H+ T   VDV FE+ SG E+      +++++  ++PL+ VLKAY+S R +N  + G VGSFLLQ
Sbjct:  220 ITYLEVIQATRVPLVKFTHSPTNINVDVSFERLSGRENATYMNDMLKRIPCLKPLIFVLKAYLSARSLNEPFLGGVGSFLLQ 301          
BLAST of mRNA_H-paniculata_contig23650.6393.1 vs. uniprot
Match: A0A7S0GSK9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GSK9_9EUKA)

HSP 1 Score: 73.2 bits (178), Expect = 2.720e-13
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 0
Query:    4 VEKIPSKKVPLVKFVHAATKQQVDVCFEQQSGIESGLAARALMRQMAPVRPLVMVLKAYMSQRQINVTYHGFVGSFLLQ 82
            VE I + +VP++KFV +A+   VD+CF   SG  +            P RPLVMVLK +++ R++N TY G VGSF+LQ
Sbjct:  256 VEVIANARVPIIKFVDSASGLSVDICFNNDSGFHAAKIVNKHASMFVPFRPLVMVLKFFLAMRELNETYTGGVGSFVLQ 334          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23650.6393.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPV2_ECTSI3.820e-2970.73Nucleotidyltransferase family protein n=1 Tax=Ecto... [more]
A0A6H5K966_9PHAE2.610e-2868.29Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S3S2P8_EMIHU1.720e-1551.90Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
A0A7S3ZN42_9STRA2.320e-1546.84Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2EAC2_9STRA3.500e-1548.10Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4DIS6_HETAK4.030e-1545.57Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2XW69_9STRA1.640e-1444.30Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0M0JJ68_9EUKA1.070e-1343.21Poly RNA polymerase n=1 Tax=Chrysochromulina tobin... [more]
A0A7S0PKD2_9STRA1.730e-1345.12Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S0GSK9_9EUKA2.720e-1344.30Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1410.10coord: 11..82
e-value: 1.0E-10
score: 43.4
NoneNo IPR availablePANTHERPTHR23092:SF15INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATEDcoord: 7..81
NoneNo IPR availablePANTHERPTHR23092POLY(A) RNA POLYMERASEcoord: 7..81
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 1..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23650contigH-paniculata_contig23650:2566..3742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23650.6393.1mRNA_H-paniculata_contig23650.6393.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23650 2566..3742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23650.6393.1 ID=prot_H-paniculata_contig23650.6393.1|Name=mRNA_H-paniculata_contig23650.6393.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp
VTDVEKIPSKKVPLVKFVHAATKQQVDVCFEQQSGIESGLAARALMRQMA
PVRPLVMVLKAYMSQRQINVTYHGFVGSFLLQ
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