mRNA_H-paniculata_contig23343.6290.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig23343.6290.1 vs. uniprot
Match: D7FYU7_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYU7_ECTSI) HSP 1 Score: 136 bits (343), Expect = 4.250e-34 Identity = 71/91 (78.02%), Postives = 83/91 (91.21%), Query Frame = 2
Query: 2 EEARGLLMKTVEDVNPSEISFTERAAMRTQCRKLAKFMKVADFLVADTYLEIALESTKSLLVEMQRAADSISESEVQNLQAVKENIGQGTQ 274
EEAR LLMKT+E+VNPSEISFTERAAMRTQCRKLAKFMKVADFLVADTYL++ALEST+ LL+EMQRAADS S++EV +LQ++KE Q +Q
Sbjct: 382 EEARELLMKTMEEVNPSEISFTERAAMRTQCRKLAKFMKVADFLVADTYLDVALESTRDLLLEMQRAADSTSDTEVMDLQSLKEESNQSSQ 472
BLAST of mRNA_H-paniculata_contig23343.6290.1 vs. uniprot
Match: A0A2R5GAF0_9STRA (Dynein heavy chain 6, axonemal n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAF0_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.740e-10 Identity = 57/161 (35.40%), Postives = 82/161 (50.93%), Query Frame = 2
Query: 56 ISFTERAAMRTQCRKLAKFMKVADFLVADTYLEIALESTK---SLLVEMQRAADSISESEVQNLQAVKENIGQGTQVHYNYLS-----SQQVGKSKGVRLPLFEVELAYVEGIEELAAA----SRNPTADPSELMLIYPPENEFHTRLEVMIFDGLTVVAN 502
I+FTERAAMRTQCRKL K++++ DFLV DT+L +A+ ST SL+ + QR+ D+ + S + A K + H L+ + ++G R P+F V + IEEL T S + +P EF E +IFD L VV +
Sbjct: 409 ITFTERAAMRTQCRKLTKYIRLVDFLVIDTFLTLAITSTAELLSLISDKQRSQDAGAVSRAKP-SADKPLLEDDATTHAETLALHAKQPSSLTTTQGPR-PIFIVRMDASVPIEELEVRLTLQEEGDTLAKSGVAF-FPTAEEFRAETESIIFDTLKVVTD 566
BLAST of mRNA_H-paniculata_contig23343.6290.1 vs. uniprot
Match: A0A2D4BMA1_PYTIN (Dynein heavy chain (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMA1_PYTIN) HSP 1 Score: 67.0 bits (162), Expect = 7.640e-10 Identity = 51/161 (31.68%), Postives = 81/161 (50.31%), Query Frame = 2
Query: 53 EISFTERAAMRTQCRKLAKFMKVADFLVADTYLEIALESTKSLLVEMQRAADSISESEVQNLQAVKENIGQGTQVHYNYLSSQQVGKSKGVRLPLFEVELAYVEGIEELA----AASRN--PTAD-----PSELMLIYPPENEFHTRLEVMIFDGLTVVAN 502
E+++TERA MRTQC+K+ KF+++ +FLV+D L +A+ ST+ LL EM Q++ G +Q N + + + K V PL +E+A L A SRN PT P+++++ P ++LE +IF GL V +
Sbjct: 234 EMTYTERATMRTQCKKITKFLRLVEFLVSDALLGVAISSTRHLLDEMHXIKAGF--------QSLNTAGGSASQAAVN---AALLARYKHV--PLLRIEVAMQSSNNVLNPHSNALSRNRAPTETSSRVIPTDILMFTPRHEHLQSQLENLIFSGLKAVTS 381
BLAST of mRNA_H-paniculata_contig23343.6290.1 vs. uniprot
Match: A0A6G0W4X3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W4X3_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.960e-9 Identity = 47/155 (30.32%), Postives = 74/155 (47.74%), Query Frame = 2
Query: 44 NPSEISFTERAAMRTQCRKLAKFMKVADFLVADTYLEIALESTKSLLVEMQRAADSISESEVQNLQAVKENIGQGTQVHYNYLSSQQVGKSKGVRL-------PLFEVELAYVEGIEELAAASRNPTADPSELMLIYPPENEFHTRLEVMIFDGL 487
N +SFTERAAMRTQCR + K +++ +FLV D +++AL ST+ +L EM++++ + + VQ+ ++ G KG + PLF VE+ +E EL L P ++ T LE ++F GL
Sbjct: 424 NGRVVSFTERAAMRTQCRNITKLIRLVEFLVVDALIDVALMSTQYILDEMKQSSTATAAKSVQSSVPIR-------------------GGKKGNAIAPPVKIVPLFCVEIHLIEATAEL---------------LFTPSGDDLRTELENVVFAGL 544
BLAST of mRNA_H-paniculata_contig23343.6290.1 vs. uniprot
Match: A0A7S2S062_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S062_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.370e-8 Identity = 29/46 (63.04%), Postives = 37/46 (80.43%), Query Frame = 2
Query: 47 PSEISFTERAAMRTQCRKLAKFMKVADFLVADTYLEIALESTKSLL 184
P I+FTERAAMRTQCRKL K++++ DFLV DT+L +A ST +LL
Sbjct: 99 PRAITFTERAAMRTQCRKLTKYIRLIDFLVVDTFLAMATSSTSTLL 144
BLAST of mRNA_H-paniculata_contig23343.6290.1 vs. uniprot
Match: A0A8K1CBU4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBU4_PYTOL) HSP 1 Score: 62.4 bits (150), Expect = 3.220e-8 Identity = 52/187 (27.81%), Postives = 83/187 (44.39%), Query Frame = 2
Query: 56 ISFTERAAMRTQCRKLAKFMKVADFLVADTYLEIALESTKSLLVEMQRAADSISESEVQNLQAVKENIGQGTQVHYNYLSSQQVGKSKGVRLPLFEVELAYVEGIEELAAASRNPTADP-------------------------------------SELMLIYPPENE-FHTRLEVMIFDGLTVVAN 502
+S+TERA MRTQCR++ KF++V +FLV+D L++A+ ST+ LL EM + D I+ Q + +G+G+ + + Q ++ PLF VE+ + L + P SE LI+ P E ++LE ++F+GL V N
Sbjct: 293 MSYTERATMRTQCRRVIKFLRVVEFLVSDALLQVAILSTERLLDEMIKIKDEIAPG-----QGDADAMGRGSA---SQTAVQAAILARYKHAPLFRVEVMLPKMKSLLPSRDGGAPVSPRFLRRQSTSNAFKSTLVLGSSKRQGSIVNRGEIVDATSESSLIFNPHQEGMRSQLETLVFNGLKAVTN 471
BLAST of mRNA_H-paniculata_contig23343.6290.1 vs. uniprot
Match: D0MS73_PHYIT (Dynein heavy chain n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MS73_PHYIT) HSP 1 Score: 60.1 bits (144), Expect = 2.020e-7 Identity = 46/177 (25.99%), Postives = 78/177 (44.07%), Query Frame = 2
Query: 47 PSEISFTERAAMRTQCRKLAKFMKVADFLVADTYLEIALEST---KSLLVEMQRAADSISESEVQNLQAVKENIGQGTQVHYNYLSSQQVGKSKGVRLPLFEVELAYVEGIEELA----AASRN------------------PTADPSELMLIYPPENEFHTRLEVMIFDGLTVVAN 502
P +++TERA M+TQCR++ KF++V +FL++D L +A+ ST ++ L R D E E +G++ S+ + PL VE+ L A+ RN +P E++ P + + ++LE M+F+GL+ V N
Sbjct: 139 PKPMTYTERATMKTQCRRITKFLRVVEFLLSDAMLRMAISSTVHLRNALAIYSRKLDDDEELE-----------DEGSRCEEIKRSATFPTIPRSTSQPLLRVEVVLQASTTSLYSRTDASDRNRGTRMSTVSGDIFTDIPVTCEEPMEMLEFIPSKEKLRSQLETMVFNGLSAVTN 304
BLAST of mRNA_H-paniculata_contig23343.6290.1 vs. uniprot
Match: A0A024U1Z6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U1Z6_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.020e-7 Identity = 47/159 (29.56%), Postives = 79/159 (49.69%), Query Frame = 2
Query: 44 NPSEISFTERAAMRTQCRKLAKFMKVADFLVADTYLEIALESTKSLLVEMQRAADSISESEVQNLQAVKENIGQGTQVHYNYLSSQQVGKSKGVRL-----------PLFEVELAYVEGIEELAAASRNPTADPSELMLIYPPENEFHTRLEVMIFDGL 487
N ++FTERAAMRTQCRK+ K +++ +F V D+++ + + ST+ LL EM+R A ++ S++ N K H +S + +L PLF VE+ ++ + E ++ R+ +L P +E LE ++F GL
Sbjct: 468 NGRAVTFTERAAMRTQCRKITKLIRLVEFFVVDSFMLLGVVSTQCLLEEMRRLARVLA-SDIHNALKPK---------HAPVATSPPTAPAGKQKLKLHAMPPPAVAPLFRVEI-HLHLVPEHGSSFRSD-------LLFTPSCDELRAELESVVFCGL 608
BLAST of mRNA_H-paniculata_contig23343.6290.1 vs. uniprot
Match: A0A329SJG7_9STRA (Dynein heavy chain 6, axonemal n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SJG7_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.030e-7 Identity = 46/167 (27.54%), Postives = 80/167 (47.90%), Query Frame = 2
Query: 56 ISFTERAAMRTQCRKLAKFMKVADFLVADTYLEIALEST---KSLLVEMQRAADSI--SESEVQNLQAVKENIGQGTQVHYNYLSSQQVGKS-KGVRLPLF----------EVELAYVEGIEELAAASRNPT--ADPSELMLIYPPENEFHTRLEVMIFDGLTVVAN 502
+++TERA M+TQCR++ KF++V +FL++D L +A+ ST ++ L R D SE E + +K + +V +G PL E L+ + G + ++ PT +P E++ P + + +LE M+F+GL+ V N
Sbjct: 559 MTYTERATMKTQCRRVTKFLRVVEFLISDAMLRMAISSTVHLRNALATYIRELDGEDNSEDECPRCEEIKRSATFSMIPRSTIQPLLRVEVVLQGATAPLSSKTNASDRHQETRLSTISGGKYFPSSQDIPTKFGEPMEMLEFIPSKEKLRAQLETMVFNGLSAVTN 725
BLAST of mRNA_H-paniculata_contig23343.6290.1 vs. uniprot
Match: A0A485K792_9STRA (Aste57867_966 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K792_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.730e-7 Identity = 46/149 (30.87%), Postives = 70/149 (46.98%), Query Frame = 2
Query: 44 NPSEISFTERAAMRTQCRKLAKFMKVADFLVADTYLEIALESTKSLLVEMQRAADSISESEVQNLQAVKENIGQGTQVHYNYLSSQQVGKSKGVRLPLFEVELAYVEGIEELAAASRNPTADPSELMLIYPPE-NEFHTRLEVMIFDGL 487
N ++FTERAAMRTQCRK+ K +++ +F+V D+ L + + ST LL EM+R A + + + A + G V L + PLF VE+ L S P LI+ P +E +E ++F G+
Sbjct: 468 NGKPVTFTERAAMRTQCRKITKLIRLVEFVVVDSLLLLGVMSTHDLLDEMRRIAAVVRAEQAKKATATPTSATTGGPVKKMQLHAAPPAA------PLFRVEV-------HLHLISDGPL---HHSQLIFTPSCDELRAEMESVVFCGI 600 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23343.6290.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23343.6290.1 >prot_H-paniculata_contig23343.6290.1 ID=prot_H-paniculata_contig23343.6290.1|Name=mRNA_H-paniculata_contig23343.6290.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=160bp MKTVEDVNPSEISFTERAAMRTQCRKLAKFMKVADFLVADTYLEIALESTback to top mRNA from alignment at H-paniculata_contig23343:784..2453- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig23343.6290.1 ID=mRNA_H-paniculata_contig23343.6290.1|Name=mRNA_H-paniculata_contig23343.6290.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1670bp|location=Sequence derived from alignment at H-paniculata_contig23343:784..2453- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig23343:784..2453- >mRNA_H-paniculata_contig23343.6290.1 ID=mRNA_H-paniculata_contig23343.6290.1|Name=mRNA_H-paniculata_contig23343.6290.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=960bp|location=Sequence derived from alignment at H-paniculata_contig23343:784..2453- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |