prot_H-paniculata_contig23263.6267.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23263.6267.1
Unique Nameprot_H-paniculata_contig23263.6267.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length272
Homology
BLAST of mRNA_H-paniculata_contig23263.6267.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 3.270e-65
Identity = 124/254 (48.82%), Postives = 160/254 (62.99%), Query Frame = 0
Query:    1 MRTALPALELTIAPLRELMKLHMWGT-SRTKCVAARK-------TGKRREAWGDVRNRLVTGAELHRRKGGWSVLMFPDTSDLFWGSFLTKVPIAQVREGLSMAEMQHEPLGYLSGAFKGSQLRWATVDKEAFAIVSTFRRLEYLLWDGVDVFCEHRNLAYIFGA-ASNEPPSKVTAQRLLHWQTFLGQFRYRIQHIPGVENLWGDMLSRMRAVEADGGPDSGSPQVDSRVIAVFAPSTADYTLPGKDVVQDRQ 245
            +RT+LP +   +APLRE ++LHM G  +RTK VA+ +       T    E+W   ++ +     L+    G +VLMFPD SD  WGSF+T+VP ++V   + + +M HEPLG+LSG F+GSQLRWATVDKE FAI+STFRRLEYLLW GV +  +HRNLAYIF   A      K TAQRL +W+  LGQ+ Y IQHI G  N WGD+LSR   V          P V +R  AVF PST D  LP K+ +++ Q
Sbjct:  123 LRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNV----------PAVSNRSAAVFMPSTPDCNLPSKNAIREVQ 366          
BLAST of mRNA_H-paniculata_contig23263.6267.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 1.750e-63
Identity = 124/254 (48.82%), Postives = 160/254 (62.99%), Query Frame = 0
Query:    1 MRTALPALELTIAPLRELMKLHMWGT-SRTKCVAARK-------TGKRREAWGDVRNRLVTGAELHRRKGGWSVLMFPDTSDLFWGSFLTKVPIAQVREGLSMAEMQHEPLGYLSGAFKGSQLRWATVDKEAFAIVSTFRRLEYLLWDGVDVFCEHRNLAYIFGA-ASNEPPSKVTAQRLLHWQTFLGQFRYRIQHIPGVENLWGDMLSRMRAVEADGGPDSGSPQVDSRVIAVFAPSTADYTLPGKDVVQDRQ 245
            +RT+LP +   +APLRE ++LHM G  +RTK VA+ +       T    E+W   ++ +     L+    G +VLMFPD SD  WGSF+T+VP ++V   + + +M HEPLG+LSG F+GSQLRWATVDKE FAI+STFRRLEYLLW GV +  +HRNLAYIF   A      K TAQRL +W+  LGQ+ Y IQHI G  N WGD+LSR   V          P V +R  AVF PST D  LP K+ +++ Q
Sbjct:  899 LRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRWVNV----------PAVSNRSAAVFMPSTPDCNLPSKNAIREVQ 1142          
BLAST of mRNA_H-paniculata_contig23263.6267.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 1.350e-59
Identity = 123/257 (47.86%), Postives = 156/257 (60.70%), Query Frame = 0
Query:    1 MRTALPALELTIAPLRELMKLHMWGT-SRTKCVAARK-------TGKRREAWGDVRNRLVTGAELHRRKGGWSVLMFPDTSDLFWGSFLTKVPIAQVREGLSMAEMQHEPLGYLSGAFKGSQL-RWATVDKEAFAIVSTFRRLEYLLWDGVDVFCEHRNLAYIFGA-ASNEPPSKVTAQRLLHWQTFLGQFRYRIQHIPGVENLWGDMLSRMRAVEADGGPDSGSPQVDSRVIAVFAPSTADYTLPGKDVVQDRQDA 247
            +RT+LP +   + PLR  ++ H+ G  SRTK VA  +       T    EAW   ++ +     L     G +VLMFPD SD  WGSFLT+VP  Q+  G+ + +M HEP+G+LSG FKG+Q  RWATVDKE +AIVSTF+RLEYLLWD V +F +HRNLAYIF   A     +K TAQRL  W+  LGQ+ Y I+HI G  N WGD+LSR  +V          P V  R  AV+APS  D  +P K VV+D Q A
Sbjct:  997 LRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPGCAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGTFKGAQQQRWATVDKEGYAIVSTFKRLEYLLWDSVHIFTDHRNLAYIFDPEACVSAVAKTTAQRLDQWKAVLGQYDYTIRHISGERNCWGDLLSRWVSV----------PSVSVRAAAVYAPSEPDAAMPSKQVVRDAQQA 1243          
BLAST of mRNA_H-paniculata_contig23263.6267.1 vs. uniprot
Match: A0A0G4ITT3_PLABS (Reverse transcriptase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4ITT3_PLABS)

HSP 1 Score: 133 bits (334), Expect = 5.940e-32
Identity = 79/209 (37.80%), Postives = 112/209 (53.59%), Query Frame = 0
Query:    1 MRTALPALELTIAPLRELMKLHMWGTSRTKCVAARKTGKRREAWGDVRNR--------LVTGAELHRRKGGWSVLMFPDTSDLFWGSFLTKVPIAQVREGLSMAEMQHEPLGYLSGAFKGSQLRWATVDKEAFAIVSTFRRLEYLLWDGVD--VFCEHRNLAYIFGAASN-EPPSKVTAQRLLHWQTFLGQFRYRIQHIPGVENLWGDM 198
            MR+A+P     + PL++L+          K    R+       WGD  +R        L         K GW V MFPD S+ FW  FLT++P + + +  S  E QHEPL ++SG+FK +QLRWAT++KEAFAIV    RL++ L+  +   +F +HRNLA+I         PS+ T  RL  W+  L    + I+HIPG EN+W D+
Sbjct:  298 MRSAIPRFAERVHPLQQLLLEASRSIGSLKKRQLRRIRLDHIGWGDQHSRSFEALKEILANLMTTAHPKDGWIVCMFPDASNQFWSVFLTQIPYSDLVK--SYDEQQHEPLAFISGSFKDNQLRWATIEKEAFAIVEGCFRLKHFLYTSLPFRIFTDHRNLAFILDPYRYMTSPSRTTGDRLERWRLQLEFLNFEIEHIPGDENIWADL 504          
BLAST of mRNA_H-paniculata_contig23263.6267.1 vs. uniprot
Match: A0A6A3JFK6_9STRA (RT_RNaseH domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3JFK6_9STRA)

HSP 1 Score: 127 bits (320), Expect = 9.000e-32
Identity = 72/173 (41.62%), Postives = 98/173 (56.65%), Query Frame = 0
Query:   43 AWG--------DVRNRLVTGAELHRRKGGWSVLMFPDTSDLFWGSFLTKVPIAQVREGLSMAEMQHEPLGYLSGAFKGSQLRWATVDKEAFAIVSTFRRLEYLLW--DGVDVFCEHRNLAYIFGA-ASNEPPSKVTAQRLLHWQTFLGQFRYRIQHIPGVENLWGDMLSRMRA 204
            AWG        DVR  L+    L        V ++ D S  FWG+ +T++   +V+  L + E  H PL +LSG F G+  RW T++KEAFAI+ + RRLEYLL    G  +F +HRNL YIF   A++   ++  A +L HW   L  FRY I+H+PG  N WGD+LSR  A
Sbjct:   43 AWGAQETAGFEDVRQALLRMVPLAHPSPSSEVCLYSDASQDFWGAVVTQLEPNEVQ--LPLEEQHHRPLAFLSGRFVGAAARWPTIEKEAFAIIESTRRLEYLLLRPKGFRLFTDHRNLVYIFDPFATDSAMARYQADKLQHWAMSLLAFRYVIEHVPGEVNAWGDLLSRWGA 213          
BLAST of mRNA_H-paniculata_contig23263.6267.1 vs. uniprot
Match: A0A6G0WUZ6_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUZ6_9STRA)

HSP 1 Score: 132 bits (331), Expect = 5.280e-31
Identity = 74/202 (36.63%), Postives = 115/202 (56.93%), Query Frame = 0
Query:   68 MFPDTSDLFWGSFLTKVPIAQVREGLSMAEMQHEPLGYLSGAFKGSQLRWATVDKEAFAIVSTFRRLEYLLW--DGVDVFCEHRNLAYIFGAASNEPPSKVTAQRLLHWQTFLGQFRYRIQHIPGVENLWGDMLSRMRAVEADGGP------DSGSPQVDSRVIAVFAPSTA----DYTLPGKDVVQD--RQDATAQGSRRR 255
            +F D S  FWG+ LT++P A + + L   E  HEPLG+LSG FKGS+LRW+T++KE +A+V+  +R  YLL   +G  ++ +HRNL YIFG  +     +  A +L  W   L  F Y+I H+ G +N+WGD+LSR     A   P      +   P+V  R++ +  P+ +    ++  P +D ++   R+ +TA    RR
Sbjct: 1153 LFTDASHEFWGAMLTQIPNASLDKPL--LEQAHEPLGFLSGKFKGSELRWSTIEKEGYAVVAACKRWNYLLLRHNGFHLYTDHRNLQYIFGTEAELNVPRYLADKLARWAVTLASFTYKIHHVAGEDNVWGDLLSRWGNANARPTPVVWGDGEDHKPRV-RRLVTLPLPNASPLNQEFIWPTQDYIRQVQREHSTAFARMRR 1351          
BLAST of mRNA_H-paniculata_contig23263.6267.1 vs. uniprot
Match: W4GS77_9STRA (Chromo domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GS77_9STRA)

HSP 1 Score: 128 bits (321), Expect = 9.880e-30
Identity = 83/256 (32.42%), Postives = 133/256 (51.95%), Query Frame = 0
Query:    1 MRTALPALELTIAPLRELMKLHMWGTSRTKCVAARKTGKRREAWGDVRNRLVTGAELHRRKGGWSVLMFPDTSDLFWGSFLTKVPIAQVREGLSMAEMQHEPLGYLSGAFKGSQLRWATVDKEAFAIVSTFRRLEYLLW--DGVDVFCEHRNLAYIFG-AASNEPPSKVTAQRLLHWQTFLGQFRYRIQHIPGVENLWGDMLSRMRAVEADGGPDSGSPQVDSR-VIAVFAP-STADYTLPGKDVVQDRQDATAQG 251
            MR ++P     + PLR L+ +        K  A  ++    + + DV++ L     L   +   +V +F D SDLFWG+  T+VP A +   L + + +H+ L +++G+F G+  RW  V+KEA+A+V + RRL+YL+    G  +F +HRNL YIF  + SN   +K  A +L  W   +  F Y I+   G  N+WGD+L R  +  AD       P V+ R +I V +P    D+  P    ++  Q +T +G
Sbjct:  448 MRASIPGYNQLVDPLRHLLDVATKAAGSCKKTALVRSSDYLKCFNDVKHALAHVVPLSHPREDMTVCVFTDASDLFWGAVATQVPPADL--DLPLEDQRHQRLAFINGSFFGASARWPIVEKEAYAMVESCRRLDYLVVRPGGFRLFTDHRNLVYIFNPSGSNTNMTKYQADKLQRWSLAMSTFPYTIECDSGDANVWGDLLCRWGSAPAD------QPVVNVRKLIHVVSPLQQVDFEWPTAATIRGIQRSTMEG 695          
BLAST of mRNA_H-paniculata_contig23263.6267.1 vs. uniprot
Match: A0A6G0WUQ0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUQ0_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.500e-29
Identity = 82/269 (30.48%), Postives = 132/269 (49.07%), Query Frame = 0
Query:    1 MRTALPALELTIAPLRELMKLHMWGTSRTKCVAARKTGKRREAWGD--------VRNRLVTGAELHRRKGGWSVLMFPDTSDLFWGSFLTKVPIAQVREGLSMAEMQHEPLGYLSGAFKGSQLRWATVDKEAFAIVSTFRRLEYLLWD--GVDVFCEHRNLAYIFGAASNEPP-SKVTAQRLLHWQTFLGQFRYRIQHIPGVENLWGDMLSRMRAVEADGGPDSGSPQVDSRVIAVFAP-STADYTLPGKDVVQDRQDATAQGSRRRLP 257
            MR ++P     +APLR+L+          K +   +       W +        +++ L+    L   +    V ++ D S+ FWG+  T+VP   +   L + + +H+PL +LSGAF G+  RW  V+KEAFA+V + +RL+Y+L    G  +F +H+NL YIF  A   P  ++  A +L  W   L  F Y I+ +PG +N+WGD+LSR  A      P +   Q+    +AV +P   AD+  P    +   Q +  +G     P
Sbjct:  891 MRASIPCYTELVAPLRQLLDQATKKIGSAKKIKLARVQLSTVGWDNSHMACFNRLKDALLAMVPLAHPRADMMVCLYTDASEGFWGAIATQVPYDDL--SLPLEDQRHQPLAFLSGAFTGASERWPIVEKEAFAVVESCKRLDYILIRPAGFRLFTDHKNLQYIFNPAGQSPNMARYQAHKLERWALVLSSFPYTIECLPGEDNVWGDLLSRWGASTQAPAPTAAVRQL----LAVVSPLQQADFDWPTTATIVKTQRSAIEGGENPPP 1153          
BLAST of mRNA_H-paniculata_contig23263.6267.1 vs. uniprot
Match: A0A2P4XDG6_9STRA (DNA/RNA polymerase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XDG6_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.850e-29
Identity = 69/161 (42.86%), Postives = 97/161 (60.25%), Query Frame = 0
Query:   47 VRNRLVTGAELHRRKGGWSVLMFPDTSDLFWGSFLTKVPIAQVREGLSMAEMQHEPLGYLSGAFKGSQLRWATVDKEAFAIVSTFRRLEYLLWD--GVDVFCEHRNLAYIFGA-ASNEPPSKVTAQRLLHWQTFLGQFRYRIQHIPGVENLWGDMLSRMRA 204
            V++ L+    L   K  W V +F D S   +G+ +T++P   V   LS+ + +H+PL +LSG+F GS  RW+T+DKEA+AIV + +RL YLL+   G  +F +HRNL YIF   A N    +    RL  W   L  FRY I+H+ G EN+WGD+LSR  A
Sbjct:  243 VKDALLKMVTLAHPKQEWEVCLFADASQAHFGAVVTQIPPEDVC--LSIHKQRHQPLAFLSGSFVGSMSRWSTIDKEAYAIVVSCKRLMYLLFRPRGFRIFTDHRNLQYIFDPLAVNSTLGRHQVDRLQRWAMTLTAFRYVIEHVRGEENVWGDLLSRWGA 401          
BLAST of mRNA_H-paniculata_contig23263.6267.1 vs. uniprot
Match: A0A6A4Z511_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z511_9STRA)

HSP 1 Score: 126 bits (316), Expect = 4.530e-29
Identity = 82/264 (31.06%), Postives = 130/264 (49.24%), Query Frame = 0
Query:    1 MRTALPALELTIAPLRELMKLHMWGTSRTKCVAARKTGKRREAWG--------DVRNRLVTGAELHRRKGGWSVLMFPDTSDLFWGSFLTKVPIAQVREGLSMAEMQHEPLGYLSGAFKGSQLRWATVDKEAFAIVSTFRRLEYLLWD--GVDVFCEHRNLAYIFG-AASNEPPSKVTAQRLLHWQTFLGQFRYRIQHIPGVENLWGDMLSRMRAVEADGGPDSGSPQVDSR-VIAVFAP-STADYTLPGKDVVQDRQDATAQG 251
            MR ++P     + PLR L+ +        K  A  +       W         +V++ L     L   +   +V +F D SDLFWG+  T+VP A +   L + + +H+PL ++SG+F G+  RW  V+KEA+A+V + +RL+YL+    G  +F +H NL YIF  + SN   +K  A +L  W   +  F Y I+ + G  N+WGD+LSR  +   D       P  + R +I V +P    D+  P    +   Q +T +G
Sbjct:  164 MRASIPGYNQLVDPLRRLLDVATKAAGSCKKTALVRVALPAVGWSSDHLKCFNEVKHALAHVVPLSHPREDMTVCVFTDASDLFWGAVATQVPPADL--DLPLEDQRHQPLAFISGSFSGASARWPIVEKEAYAVVESCKRLDYLVVHPGGFRLFTDHHNLVYIFNPSGSNANMAKYQADKLQRWSLVMSTFPYTIECVSGDANVWGDLLSRWGSAPTD------QPVANVRKLIHVVSPLQQVDFEWPTAATISGIQRSTMEG 419          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23263.6267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCX8_9PHAE3.270e-6548.82Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L7F6_9PHAE1.750e-6348.82Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE1.350e-5947.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4ITT3_PLABS5.940e-3237.80Reverse transcriptase domain-containing protein n=... [more]
A0A6A3JFK6_9STRA9.000e-3241.62RT_RNaseH domain-containing protein n=1 Tax=Phytop... [more]
A0A6G0WUZ6_9STRA5.280e-3136.63Uncharacterized protein n=3 Tax=Aphanomyces euteic... [more]
W4GS77_9STRA9.880e-3032.42Chromo domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A6G0WUQ0_9STRA1.500e-2930.48Uncharacterized protein n=3 Tax=Aphanomyces euteic... [more]
A0A2P4XDG6_9STRA1.850e-2942.86DNA/RNA polymerase n=1 Tax=Phytophthora palmivora ... [more]
A0A6A4Z511_9STRA4.530e-2931.06Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 2..201
e-value: 1.4E-18
score: 69.3
NoneNo IPR availableGENE3D3.10.20.370coord: 58..188
e-value: 1.4E-18
score: 69.3
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 35..193
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 68..181
e-value: 4.6E-15
score: 55.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23263contigH-paniculata_contig23263:2623..3459 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23263.6267.1mRNA_H-paniculata_contig23263.6267.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23263 2590..4010 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23263.6267.1 ID=prot_H-paniculata_contig23263.6267.1|Name=mRNA_H-paniculata_contig23263.6267.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=272bp
MRTALPALELTIAPLRELMKLHMWGTSRTKCVAARKTGKRREAWGDVRNR
LVTGAELHRRKGGWSVLMFPDTSDLFWGSFLTKVPIAQVREGLSMAEMQH
EPLGYLSGAFKGSQLRWATVDKEAFAIVSTFRRLEYLLWDGVDVFCEHRN
LAYIFGAASNEPPSKVTAQRLLHWQTFLGQFRYRIQHIPGVENLWGDMLS
RMRAVEADGGPDSGSPQVDSRVIAVFAPSTADYTLPGKDVVQDRQDATAQ
GSRRRLPRWVMRCAGLMVCTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041373RT_RNaseH