mRNA_H-paniculata_contig23219.6253.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig23219.6253.1 vs. uniprot
Match: D8LD03_ECTSI (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD03_ECTSI) HSP 1 Score: 162 bits (409), Expect = 5.960e-45 Identity = 81/116 (69.83%), Postives = 95/116 (81.90%), Query Frame = 1
Query: 19 VTLACSYAARQQGLYPPRGILLSGVPGTGKTMLAKAVAKESGATFINVSLSALNSKWVGDTEKYICAIFSLASKLAPSIIFIDEIDGFLRCRSGMDTQHALNAKTEFMTQWDGLLT 366
VTLACS A+ QG+ PRGILLSGVPGTGKTMLA+A+AKESGATFINV + A+ KWVG+ EK + AIFSLA+KLAPSIIFIDEID F+R R+ ++ H + KTEFMT WDGLLT
Sbjct: 156 VTLACSREAQLQGVGAPRGILLSGVPGTGKTMLARAIAKESGATFINVRMGAVQQKWVGEGEKMVSAIFSLANKLAPSIIFIDEIDCFMRTRNVLEQDHVVRVKTEFMTLWDGLLT 271
BLAST of mRNA_H-paniculata_contig23219.6253.1 vs. uniprot
Match: B7FNH7_MEDTR (AAA domain-containing protein n=3 Tax=Medicago truncatula TaxID=3880 RepID=B7FNH7_MEDTR) HSP 1 Score: 131 bits (330), Expect = 4.150e-35 Identity = 67/106 (63.21%), Postives = 76/106 (71.70%), Query Frame = 1
Query: 58 LYPPRGILLSGVPGTGKTMLAKAVAKESGATFINVSLSALNSKWVGDTEKYICAIFSLASKLAPSIIFIDEIDGFLRCRSGMDTQHALNAKTEFMTQWDGLLTGAS 375
L P +G+LL G PGTGKTMLAKA+AKESGA FINV +S L SKW GD +K + A+FSLA KL PSIIFIDE+D FL R D + LN KTEFM WDG T S
Sbjct: 116 LGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAHKLQPSIIFIDEVDSFLGQRRSSDHEAVLNMKTEFMALWDGFATDQS 221
BLAST of mRNA_H-paniculata_contig23219.6253.1 vs. uniprot
Match: A0A199UI21_ANACO (Putative AAA domain-containing protein C24B10.10c (Fragment) n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199UI21_ANACO) HSP 1 Score: 126 bits (317), Expect = 1.570e-34 Identity = 63/103 (61.17%), Postives = 75/103 (72.82%), Query Frame = 1
Query: 58 LYPPRGILLSGVPGTGKTMLAKAVAKESGATFINVSLSALNSKWVGDTEKYICAIFSLASKLAPSIIFIDEIDGFLRCRSGMDTQHALNAKTEFMTQWDGLLT 366
L P +G+LL G PGTGKTM+AKA+AKESGA FINV +S L SKW GD +K + A+FSLA KL P+IIFIDE+D FL R D + N KTEFM+ WDG T
Sbjct: 50 LSPQKGVLLYGPPGTGKTMIAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRTTDHEAMTNMKTEFMSLWDGFTT 152
BLAST of mRNA_H-paniculata_contig23219.6253.1 vs. uniprot
Match: A0A7S2S4B0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S4B0_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.710e-34 Identity = 67/104 (64.42%), Postives = 80/104 (76.92%), Query Frame = 1
Query: 64 PPRGILLSGVPGTGKTMLAKAVAKESGATFINVSLSALNSKWVGDTEKYICAIFSLASKLAPSIIFIDEIDGFLRCRSGMDTQHALNAKTEFMTQWDGLLTGAS 375
PPRGILL GVPGTGKTMLAKAVAKESGATF+NV LS++ KW G++ K I A FSLA+KLAPS+IFIDEID FL R + + K+EF+T WDG+ T A+
Sbjct: 31 PPRGILLYGVPGTGKTMLAKAVAKESGATFVNVRLSSIMDKWFGESNKLISATFSLATKLAPSVIFIDEIDTFLSQRDSGEGSATTSMKSEFLTLWDGMTTEAA 134
BLAST of mRNA_H-paniculata_contig23219.6253.1 vs. uniprot
Match: A0A2R6QMU6_ACTCC (ATPase family AAA domain-containing protein n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QMU6_ACTCC) HSP 1 Score: 131 bits (329), Expect = 3.000e-34 Identity = 67/108 (62.04%), Postives = 78/108 (72.22%), Query Frame = 1
Query: 43 ARQQGLYPPRGILLSGVPGTGKTMLAKAVAKESGATFINVSLSALNSKWVGDTEKYICAIFSLASKLAPSIIFIDEIDGFLRCRSGMDTQHALNAKTEFMTQWDGLLT 366
AR + L P +G+LL G PGTGKTMLAKA+AKESGA FINV +S L SKW GD +K + A+FSLA KL P+IIFIDE+D FL R MD + N KTEFM WDG T
Sbjct: 113 ARGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRHAMDNEVLANMKTEFMALWDGFTT 220
BLAST of mRNA_H-paniculata_contig23219.6253.1 vs. uniprot
Match: S8C5Y8_9LAMI (AAA domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8C5Y8_9LAMI) HSP 1 Score: 129 bits (325), Expect = 4.220e-34 Identity = 65/103 (63.11%), Postives = 75/103 (72.82%), Query Frame = 1
Query: 58 LYPPRGILLSGVPGTGKTMLAKAVAKESGATFINVSLSALNSKWVGDTEKYICAIFSLASKLAPSIIFIDEIDGFLRCRSGMDTQHALNAKTEFMTQWDGLLT 366
L P +G+LL G PGTGKTMLAKA+AKESG+ FINV LS L SKW GD +K + AIFSLA KL P+I+FIDE+DGFL R D + N KTEFM WDG T
Sbjct: 111 LGPQKGVLLYGPPGTGKTMLAKAIAKESGSVFINVRLSNLMSKWFGDAQKLVAAIFSLAYKLQPAIVFIDEVDGFLGQRKSSDHEAMANMKTEFMALWDGFTT 213
BLAST of mRNA_H-paniculata_contig23219.6253.1 vs. uniprot
Match: A0A0K9PRC3_ZOSMR (ATPase n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PRC3_ZOSMR) HSP 1 Score: 130 bits (327), Expect = 6.980e-34 Identity = 66/103 (64.08%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 58 LYPPRGILLSGVPGTGKTMLAKAVAKESGATFINVSLSALNSKWVGDTEKYICAIFSLASKLAPSIIFIDEIDGFLRCRSGMDTQHALNAKTEFMTQWDGLLT 366
L P RG+LL G PGTGKTMLAKA+AKESGA FINV +S L SKW GD +K + A+FSLA KL PSIIFIDE+D FL R D++ N KTEFM+ WDG T
Sbjct: 121 LRPQRGVLLYGPPGTGKTMLAKAIAKESGAVFINVRVSNLMSKWFGDAQKLVAAVFSLAYKLQPSIIFIDEVDSFLGQRRTTDSEAITNMKTEFMSLWDGFTT 223
BLAST of mRNA_H-paniculata_contig23219.6253.1 vs. uniprot
Match: A0A7S3B9V0_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3B9V0_9VIRI) HSP 1 Score: 128 bits (321), Expect = 7.430e-34 Identity = 66/111 (59.46%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 58 LYPPRGILLSGVPGTGKTMLAKAVAKESGATFINVSLSALNSKWVGDTEKYICAIFSLASKLAPSIIFIDEIDGFLRCRSGMDTQHALNAKTEFMTQWDGLLTGASGWGRG 390
L P +G+LL G PGTGKTMLAKA+A ESGA FINV +S+L SKW GD +K + A+F+LA KLAPSIIF+DE+D FL R + + N KTEFMT WDG L+ G G+G
Sbjct: 30 LQPVKGVLLYGPPGTGKTMLAKAIANESGAAFINVRVSSLQSKWFGDAQKLVTAVFTLAWKLAPSIIFVDEVDSFLGKRRTGEHEAVTNMKTEFMTLWDGFLS-RGGQGQG 139
BLAST of mRNA_H-paniculata_contig23219.6253.1 vs. uniprot
Match: A0A3S4PKN2_9MAGN (ATPase family AAA domain-containing protein 1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S4PKN2_9MAGN) HSP 1 Score: 130 bits (327), Expect = 7.760e-34 Identity = 64/103 (62.14%), Postives = 77/103 (74.76%), Query Frame = 1
Query: 58 LYPPRGILLSGVPGTGKTMLAKAVAKESGATFINVSLSALNSKWVGDTEKYICAIFSLASKLAPSIIFIDEIDGFLRCRSGMDTQHALNAKTEFMTQWDGLLT 366
L P+G+LL G PGTGKT LAKA+AKESGA FINV +S L SKW GD +KY+ A+FSLA KL P+IIFIDE+DGFL R+ + + + KTEFM WDGL T
Sbjct: 140 LRQPKGVLLHGPPGTGKTTLAKAIAKESGAVFINVKMSTLKSKWFGDADKYVNAVFSLAYKLQPAIIFIDEVDGFLGKRNSSEFEALKSMKTEFMALWDGLTT 242
BLAST of mRNA_H-paniculata_contig23219.6253.1 vs. uniprot
Match: A0A834TXV1_9FABA (ATPase family AAA domain-containing protein 1-B-like n=1 Tax=Senna tora TaxID=362788 RepID=A0A834TXV1_9FABA) HSP 1 Score: 130 bits (326), Expect = 8.010e-34 Identity = 65/103 (63.11%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 58 LYPPRGILLSGVPGTGKTMLAKAVAKESGATFINVSLSALNSKWVGDTEKYICAIFSLASKLAPSIIFIDEIDGFLRCRSGMDTQHALNAKTEFMTQWDGLLT 366
L P +G+LL G PGTGKTMLAKA+AKESGA FINV +S L SKW+GD +K + A+FSLA KL P+IIFIDE+D FL R D + L KTEFM WDGL T
Sbjct: 115 LGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVKMSNLMSKWLGDAQKLVAAVFSLARKLQPAIIFIDEVDSFLGHRRATDHEAILTMKTEFMALWDGLTT 217 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23219.6253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23219.6253.1 >prot_H-paniculata_contig23219.6253.1 ID=prot_H-paniculata_contig23219.6253.1|Name=mRNA_H-paniculata_contig23219.6253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=135bp MTLSLQVTLACSYAARQQGLYPPRGILLSGVPGTGKTMLAKAVAKESGATback to top mRNA from alignment at H-paniculata_contig23219:265..2497+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig23219.6253.1 ID=mRNA_H-paniculata_contig23219.6253.1|Name=mRNA_H-paniculata_contig23219.6253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2233bp|location=Sequence derived from alignment at H-paniculata_contig23219:265..2497+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig23219:265..2497+ >mRNA_H-paniculata_contig23219.6253.1 ID=mRNA_H-paniculata_contig23219.6253.1|Name=mRNA_H-paniculata_contig23219.6253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=810bp|location=Sequence derived from alignment at H-paniculata_contig23219:265..2497+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |