prot_H-paniculata_contig23056.6191.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23056.6191.1
Unique Nameprot_H-paniculata_contig23056.6191.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length114
Homology
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BLAST of mRNA_H-paniculata_contig23056.6191.1 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.310e-19
Identity = 45/109 (41.28%), Postives = 68/109 (62.39%), Query Frame = 0 
Query:    6 LSTKCAVKLAVDTLAGDKTILNPSTSTDARLNKLFQSVKDSLHPRGTIAIMVPHPWHLHAGRIRSALTHASVGLHVEDHPLLLQYKGMRAGRTSQNAVNHLRYNADMVM 114
            LS + A KL + ++  ++ +L  S +T+  L ++  +V+  +HP GTIA++VPHPW  H  R++ A+  A VGL VEDHPL+L Y     GR    A NHL+ + DMV+
Sbjct:  347 LSFRNAPKLVIVSIGAEQRLLRTSEATNTHLRRVIDNVRGRMHPDGTIALVVPHPWSAHFHRLQEAVRDACVGLVVEDHPLMLNYSKRVGGRPPIRAENHLKNHLDMVL 455
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BLAST of mRNA_H-paniculata_contig23056.6191.1 vs. uniprot
Match: A0A6H5KC60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC60_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 2.690e-6
Identity = 25/71 (35.21%), Postives = 43/71 (60.56%), Query Frame = 0 
Query:    6 LSTKCAVKLAVDTLAGDKTILNPSTSTDARLNKLFQSVKDSLHPRGTIAIMVPHPWHLHAGRIRSALTHAS 76
            LS + A KL + ++  ++ +L  S +T+  L ++  +V+  +HP GTIA++VPHPW  H  R++   T  S
Sbjct:  405 LSFRNAPKLVIVSIGAEQRLLKTSEATNTHLRRVIDNVRGRMHPDGTIALVVPHPWSAHFHRLQGDSTFLS 475
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23056.6191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LBJ9_9PHAE2.310e-1941.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC60_9PHAE2.690e-635.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23056contigH-paniculata_contig23056:1747..2431 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23056.6191.1mRNA_H-paniculata_contig23056.6191.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23056 1747..2863 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23056.6191.1 ID=prot_H-paniculata_contig23056.6191.1|Name=mRNA_H-paniculata_contig23056.6191.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=114bp
MTDGSLSTKCAVKLAVDTLAGDKTILNPSTSTDARLNKLFQSVKDSLHPR
GTIAIMVPHPWHLHAGRIRSALTHASVGLHVEDHPLLLQYKGMRAGRTSQ
NAVNHLRYNADMVM
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