prot_H-paniculata_contig2305.6188.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2305.6188.1
Unique Nameprot_H-paniculata_contig2305.6188.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length81
Homology
BLAST of mRNA_H-paniculata_contig2305.6188.1 vs. uniprot
Match: D8LG10_ECTSI (Cytochrome c oxidase subunit 6b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG10_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 2.260e-32
Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 0
Query:    1 MSTTIKEIKTAPLDSRFPTVNQANHCWNVYNEWAMCAKN--EGDDEAAACAVPRQKSMSLCPDEWTEKWDEEREEGNFTGIQ 80
            MS+  +  KTAP DSRFPTVNQANHCWN+YNEW +C K   E  D+A  C   R  +++LCPDEWTEKWDE+R+EG + GI+
Sbjct:    1 MSSASRYFKTAPSDSRFPTVNQANHCWNLYNEWVLCTKKAEEAGDDAKKCYRKRHNALALCPDEWTEKWDEDRDEGTYAGIK 82          
BLAST of mRNA_H-paniculata_contig2305.6188.1 vs. uniprot
Match: A0A7S2D0D8_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D0D8_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.910e-29
Identity = 45/76 (59.21%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    5 IKEIKTAPLDSRFPTVNQANHCWNVYNEWAMCAKNEGDDEAAACAVPRQKSMSLCPDEWTEKWDEEREEGNFTGIQ 80
            +K IKT+P D RFP+ NQANHCWN YNEW MC K    D A AC   RQ ++S+CP++W+ KWDEEREEG+F G++
Sbjct:   20 VKMIKTSPSDKRFPSQNQANHCWNRYNEWVMCLKGTAGD-ADACKGVRQMALSICPEDWSNKWDEEREEGSFAGVE 94          
BLAST of mRNA_H-paniculata_contig2305.6188.1 vs. uniprot
Match: A0A485L9N9_9STRA (Aste57867_18289 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9N9_9STRA)

HSP 1 Score: 105 bits (263), Expect = 2.720e-28
Identity = 45/76 (59.21%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    5 IKEIKTAPLDSRFPTVNQANHCWNVYNEWAMCAKNEGDDEAAACAVPRQKSMSLCPDEWTEKWDEEREEGNFTGIQ 80
            I++ KT P+D RFPT NQ  HCW  YNEWA+C K  GDDE A C   R  + SLCP  W EKWD ER+EGNF+G+Q
Sbjct:    4 IEDFKTTPVDPRFPTQNQTQHCWVRYNEWALCLKQNGDDEDA-CKKQRSYARSLCPGSWIEKWDTERDEGNFSGVQ 78          
BLAST of mRNA_H-paniculata_contig2305.6188.1 vs. uniprot
Match: A0A1E7FVA6_9STRA (Cytochrome c oxidase subunit H n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVA6_9STRA)

HSP 1 Score: 104 bits (259), Expect = 2.320e-27
Identity = 42/76 (55.26%), Postives = 51/76 (67.11%), Query Frame = 0
Query:    5 IKEIKTAPLDSRFPTVNQANHCWNVYNEWAMCAKNEGDDEAAACAVPRQKSMSLCPDEWTEKWDEEREEGNFTGIQ 80
            +K ++T P D+RFP+ NQA HCWN YNEW +C K  GDD    C V RQ + S+CP  W E WDE REEG F GI+
Sbjct:   29 VKNVRTTPRDARFPSQNQALHCWNRYNEWLLCKKQSGDDADEKCQVYRQYASSICPSPWIENWDESREEGTFMGIK 104          
BLAST of mRNA_H-paniculata_contig2305.6188.1 vs. uniprot
Match: A0A8J2WWH0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWH0_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.510e-27
Identity = 46/80 (57.50%), Postives = 56/80 (70.00%), Query Frame = 0
Query:    1 MSTTIKEIKTAPLDSRFPTVNQANHCWNVYNEWAMCAKNEGDDEAAACAVPRQKSMSLCPDEWTEKWDEEREEGNFTGIQ 80
            MS  I  IKT P D RFP+ NQA+HCWN YNE+ MC K    DE A C   RQ ++S+CPD+W  KWDEEREEG F+G++
Sbjct:   32 MSGLIPHIKTTPYDKRFPSTNQASHCWNRYNEYVMCLKKTESDEDA-CKPMRQLALSICPDDWWNKWDEEREEGTFSGVK 110          
BLAST of mRNA_H-paniculata_contig2305.6188.1 vs. uniprot
Match: A0A7S2SC35_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SC35_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.110e-27
Identity = 48/80 (60.00%), Postives = 54/80 (67.50%), Query Frame = 0
Query:    1 MSTTIKEIKTAPLDSRFPTVNQANHCWNVYNEWAMCAKNEGDDEAAACAVPRQKSMSLCPDEWTEKWDEEREEGNFTGIQ 80
            MS+ +  +KT   D RFP  NQANHCWN YNEW MC K    DE A C   RQ ++SLCP EW EKWDEEREEG F GI+
Sbjct:   19 MSSIVNFMKTTQADKRFPNQNQANHCWNRYNEWVMCLKGTQGDEDA-CKGVRQLAVSLCPCEWVEKWDEEREEGAFAGIK 97          
BLAST of mRNA_H-paniculata_contig2305.6188.1 vs. uniprot
Match: A0A7S4JKT8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JKT8_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.290e-27
Identity = 42/76 (55.26%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    5 IKEIKTAPLDSRFPTVNQANHCWNVYNEWAMCAKNEGDDEAAACAVPRQKSMSLCPDEWTEKWDEEREEGNFTGIQ 80
            +K ++T P D+RFP+ NQ+NHCWN YNEW +C K+ G DEA  C   RQ ++S+CP  W+EKWDEEREE  + GI+
Sbjct:   30 VKSVRTTPRDARFPSQNQSNHCWNRYNEWLLCLKSTGGDEAG-CKHMRQMAVSICPSIWSEKWDEEREENTYPGIK 104          
BLAST of mRNA_H-paniculata_contig2305.6188.1 vs. uniprot
Match: A0A067CJ90_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJ90_SAPPC)

HSP 1 Score: 102 bits (254), Expect = 6.410e-27
Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    6 KEIKTAPLDSRFPTVNQANHCWNVYNEWAMCAKNEGDDEAAACAVPRQKSMSLCPDEWTEKWDEEREEGNFTGIQ 80
            +++KT P+D RFPT NQ  HCW  YNEWA+C K   DDE A C   RQ + ++CP  W EKWD ER++GNF+G+Q
Sbjct:    5 EDLKTTPVDPRFPTQNQTQHCWTRYNEWALCLKKNDDDEDA-CKQTRQYAKAICPGSWMEKWDTERDDGNFSGVQ 78          
BLAST of mRNA_H-paniculata_contig2305.6188.1 vs. uniprot
Match: A0A7S4JKQ2_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JKQ2_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.070e-26
Identity = 42/76 (55.26%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    5 IKEIKTAPLDSRFPTVNQANHCWNVYNEWAMCAKNEGDDEAAACAVPRQKSMSLCPDEWTEKWDEEREEGNFTGIQ 80
            +K ++T P D+RFP+ NQ+NHCWN YNEW +C K+ G DEA  C   RQ ++S+CP  W+EKWDEEREE  + GI+
Sbjct:   72 VKSVRTTPRDARFPSQNQSNHCWNRYNEWLLCLKSTGGDEAG-CKHMRQMAVSICPSIWSEKWDEEREENTYPGIK 146          
BLAST of mRNA_H-paniculata_contig2305.6188.1 vs. uniprot
Match: A0A024TKH7_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TKH7_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.290e-26
Identity = 43/73 (58.90%), Postives = 51/73 (69.86%), Query Frame = 0
Query:    7 EIKTAPLDSRFPTVNQANHCWNVYNEWAMCAKNEGDDEAAACAVPRQKSMSLCPDEWTEKWDEEREEGNFTGI 79
            ++KT P+D RFPT NQ  HCW  YNEWA+C K   DDE A C   RQ + SLCP  W EKWD ER+EGNF+G+
Sbjct:    6 DLKTTPVDPRFPTQNQTQHCWVRYNEWALCLKKNDDDEDA-CKKHRQYAKSLCPGSWLEKWDTERDEGNFSGV 77          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2305.6188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG10_ECTSI2.260e-3259.76Cytochrome c oxidase subunit 6b n=1 Tax=Ectocarpus... [more]
A0A7S2D0D8_9STRA2.910e-2959.21Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A485L9N9_9STRA2.720e-2859.21Aste57867_18289 protein n=1 Tax=Aphanomyces stella... [more]
A0A1E7FVA6_9STRA2.320e-2755.26Cytochrome c oxidase subunit H n=1 Tax=Fragilariop... [more]
A0A8J2WWH0_9STRA2.510e-2757.50Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2SC35_9STRA3.110e-2760.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4JKT8_9STRA3.290e-2755.26Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A067CJ90_SAPPC6.410e-2754.67Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A7S4JKQ2_9STRA1.070e-2655.26Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A024TKH7_9STRA1.290e-2658.90Uncharacterized protein n=4 Tax=Aphanomyces TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003213Cytochrome c oxidase, subunit VIbPFAMPF02297COX6Bcoord: 16..71
e-value: 6.4E-11
score: 42.3
IPR036549Cytochrome c oxidase, subunit VIb superfamilyGENE3D1.10.10.140coord: 1..79
e-value: 1.7E-24
score: 88.0
IPR036549Cytochrome c oxidase, subunit VIb superfamilySUPERFAMILY47694Cytochrome c oxidase subunit hcoord: 6..78
NoneNo IPR availablePANTHERPTHR46281FAMILY NOT NAMEDcoord: 6..78
NoneNo IPR availablePANTHERPTHR46281:SF2CYTOCHROME C OXIDASE SUBUNIT 6Bcoord: 6..78
NoneNo IPR availablePRODOMPD015172coord: 12..78
e-value: 5.0E-5
score: 105.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2305contigH-paniculata_contig2305:12573..17285 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2305.6188.1mRNA_H-paniculata_contig2305.6188.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2305 12523..18046 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2305.6188.1 ID=prot_H-paniculata_contig2305.6188.1|Name=mRNA_H-paniculata_contig2305.6188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=81bp
MSTTIKEIKTAPLDSRFPTVNQANHCWNVYNEWAMCAKNEGDDEAAACAV
PRQKSMSLCPDEWTEKWDEEREEGNFTGIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003213Cyt_c_oxidase_su6B
IPR036549Cyt_c_oxidase_su6B_sf