prot_H-paniculata_contig2304.6184.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2304.6184.1
Unique Nameprot_H-paniculata_contig2304.6184.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1227
Homology
BLAST of mRNA_H-paniculata_contig2304.6184.1 vs. uniprot
Match: A0A6H5JNQ0_9PHAE (KIX_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ0_9PHAE)

HSP 1 Score: 442 bits (1137), Expect = 4.760e-130
Identity = 526/1223 (43.01%), Postives = 611/1223 (49.96%), Query Frame = 0
Query:   62 SVGVSQG-VGVSSPMVLPSGGVHPGGNGVG------GQQTQQLEAARKEEMAKAQRSQRAEELRNIYQEDIHYFVQHGSSLLKKLHKTRPASQSSEQVQKLIQYVKEGHNALLYINRCHDTGHVPSAASLQSLEHTLIRVHKASNALQVMIRDHSKSQSN------MYLQSPVAHQNQPGTRQFSGPDQHVFSTSGTSIGGQATTSLGGSMNPAAMTPGSSGGVGTPSSSSLEVPTAS------TLTDLEPIPLPDT---YPISQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILLRRQHAXXXXXXXRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPHHPLLQQELQXXXXXXXXXXXXXXXXXXXXXXXLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAAASTPLGPASSQLTLTHRPSSDMFWNPGDMVDLEPTPLEDTPLEESLTTGLDAGGGDFDMPVDDFFDLXXXXXXXXXXEGEDWLSTQSLPDEGSATPGATVKLDPTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGVTAPIPTSVGPPTVAVVXXXXXXMQSALAQQQLSQAQPQQLPLLQQQQGLPEIENILQQQSVGLDVKLVNGNGLPDAAGPPVMLSPPQPQTVVDKLAAMVAEGGPAATNLGRLANGVSSSLGFRAPGSVTRA-DSPRPYLAGGV-DADLRAVESGLGFTDVLGVEDTSAG---------VTPAGLRNVGQTLGRQANNAFEAMAAAADTSQGDPAALSDVISHQLGPLPRLLNGFASGCAALTPPVSHASVGNGAASSAGSLTSLPSAGGDNNSNAPSNSAL--KRPKSECSDDNERLGKVPRMESGGIGGGSGPATSAFAGGGDPADNGXXXAGAGSMSRPENGXXXXXXXXXXXXXXXXXX--------ARPTTADFRHGGGEEMMALLKAKVGRIFSLEAEYTHVR----SNNGPVPAALGVNGTETLAVAAAGSGGEQDGGGDVGTAVSTGGDKSGSAAGD---NVGTNGLRRVLARLKAVRAGQFVAYIQFDVAG-NEFRPCDVSVLSWGEAGEGSSAXXXXXXXXXXXXXXQGSASDGSSSPRE------FMNALDGTKPWRTSQHTALIHVSGHAYQ 1227
            S+G S G VGVS+ MV+ +G  H GG GVG      G  T Q EAA KEE AK  RS+RAEELR IYQEDIHYFVQHGSSLLKKLHKTRPASQ+SEQV KL+QYVKEGHNALLYINRCH+TGHVPSAASLQSLEHTLIRVHKASNALQVMIRDHSK+Q                   Q  +RQ+S  DQ+ FS       GQ+ ++LG          G++GGV TP  S     T S          L+ IPLPDT   Y   QQXXXXXX                                            RRQ A      X   XXXXXXXXXXXXXXXXXXXXX                                                                      L QQ+L X   XXXXXXXXXXXXXXXXXXX  XX     XXXXXXXXXXXXXXX                  A+AS+   P +  L      S+DMFW   D+ DLEPTPL   PLE+ +       GGDFDMPV+DF DL          +G+DWLSTQ LP+     PG + +                                         G  +  P +  PP  A+       +  +   QQ            QQQQGLP+++  L   SVG    L NG        P   +  P PQTVVD+LAA+VA GG AA+NLGRLA  VS+ LGFRAPGS   A DS R YL G   D DL A E+ LG    +G    ++G         +T +GLR+ GQTL RQAN+AFEAMA AAD ++G+PA L +VI+HQLGP+PRLLNG  SGC  + P  S A+V    + S GS  +                AL  KR K EC D ++  G+  +  + G                      XXX            XXXXXXXXXXXXXXXXXX        ARP +ADFRHGGGEE+MALL+AKVGR+FSL AEYTHVR    S NG   A  G  G +           ++DG                  AGD   +VG  GLRRVL+R+KAVRAG FV +I FDVAG NE RPCDVSVLSW EA EG SA                  S G +  R       FM+ + G+KPWR SQHTA + VSGHA+Q
Sbjct:  269 SIGSSTGMVGVSAGMVMSTG--HTGGGGVGAVGGGSGTSTGQHEAALKEERAKQHRSRRAEELRTIYQEDIHYFVQHGSSLLKKLHKTRPASQNSEQVLKLVQYVKEGHNALLYINRCHETGHVPSAASLQSLEHTLIRVHKASNALQVMIRDHSKTQYGGCGXXXXXXXXXXXXXXQQPSRQYSA-DQNAFSP------GQSNSTLG-------PLGGTAGGVVTPVCSVGPTLTGSIDGGDSAALSLDAIPLPDTGTGYRTPQQXXXXXXNFLRQTQQQVGTA-------------------------------RRQRAHQLQLQXXXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------------LQQQQLXXQQNXXXXXXXXXXXXXXXXXXXXXXXMPFRQXXXXXXXXXXXXXXX------------------ASASSGALPDARLLLAQGESSNDMFWGSVDIGDLEPTPLSG-PLEDQVIPPNLEEGGDFDMPVEDFLDLDPFPLEGMPLDGDDWLSTQCLPEGSGNKPGGSPRAG---------------------------NNSMDSSAVGGCGGASTRPGAYVPPPGALGDSGAGGLAVSSGLQQ------------QQQQGLPQLQTQL---SVGGLTPLGNGASGVAPINPADPIPEPLPQTVVDRLAAVVAGGGTAASNLGRLAGSVSAQLGFRAPGSTAAAADSSRSYLGGAAQDPDLLAAEASLG----MGQSGRASGXXXXXXCGALTASGLRSAGQTLCRQANSAFEAMATAADVNKGNPALLHNVINHQLGPMPRLLNGLVSGCTVVVPAPSVAAVPPARSGSRGSGAAQDGTAXXXXXXXXXXXALSNKRTKDECGDGDD--GRPEKKIALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLLARPASADFRHGGGEELMALLRAKVGRLFSLSAEYTHVRTGGMSGNGSSAALGGEVGKK-----------QEDGLTXXXXXXXXXXXXXXXTAGDVKPDVGGGGLRRVLSRVKAVRAGHFVVHINFDVAGSNECRPCDVSVLSWNEAQEGESA------------------SAGGADARVKVEGGGFMDTVHGSKPWRASQHTAFVRVSGHAFQ 1278          
BLAST of mRNA_H-paniculata_contig2304.6184.1 vs. uniprot
Match: D7FX92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX92_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 2.410e-38
Identity = 109/220 (49.55%), Postives = 123/220 (55.91%), Query Frame = 0
Query: 1029 ARPTTADFRHGGGEEMMALLKAKVGRIFSLEAEYTHVRSNNGPV---PAALGVNGTETLAVAAAGSGGEQDGGGDVGTAVSTG--------------GDKSGSAAGD---NVGTNGLRRVLARLKAVRAGQFVAYIQFDVAG-NEFRPCDVSVLSWGEAGEGSSAXXXXXXXXXXXXXXQGSASDGSSSPREFMNALDGTKPWRTSQHTALIHVSGHAYQ 1227
            ARP +ADFRHGGGEE+MA LKAKVGR+FSL AEYTHVR+   P    PAALG                    GG+VG     G                     AGD   +VG  GLRRVLAR+KAVRAG FV +I+FDVAG NE RPCDVSVLSW EA EG SA                    G  S   FM+ + G+KPWRTSQHTA + VSGHA+Q
Sbjct:  332 ARPASADFRHGGGEELMARLKAKVGRLFSLSAEYTHVRTGVVPENGSPAALG--------------------GGEVGKKQEAGLTNXXXXXXXXXXXXXXXXXXAGDVKSDVGGGGLRRVLARVKAVRAGHFVVHIKFDVAGSNECRPCDVSVLSWNEAQEGESASTGGADARVK-------VEGGGQSGGGFMDTVHGSKPWRTSQHTAFVRVSGHAFQ 524          
BLAST of mRNA_H-paniculata_contig2304.6184.1 vs. uniprot
Match: A0A835Z449_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z449_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.870e-14
Identity = 54/104 (51.92%), Postives = 69/104 (66.35%), Query Frame = 0
Query:  108 AQRSQRAEELRNIYQEDIHYFVQHGSSLLKKLHKTRPASQSS------EQVQKLIQYVKEGHNALLYINRCHDTGHVPSAASLQSLEHTLIRVHKASNALQVMI 205
            A R + AE+LR  Y+ DI  FVQ G S+L K H   P S ++      +Q++KL QYV+EG NAL+Y+ RCH  GHVPSA SLQSLE TL +VH AS  L+ M+
Sbjct:  441 AARVECAEQLRRRYEADIRAFVQQGRSVLLK-HDGSPRSMAAHGSGGADQIRKLRQYVREGQNALVYMERCHSRGHVPSAVSLQSLEQTLAKVHCASRTLRQMM 543          
BLAST of mRNA_H-paniculata_contig2304.6184.1 vs. uniprot
Match: A0A836CHY1_9STRA (KIX_2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHY1_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.190e-6
Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 0
Query:  152 VQKLIQYVKEGHNALLYINRCHDTGHVPSAASLQSLEHTLIRVHKASNALQVM 204
            V+KL+QY++EG NAL+Y+ RCH   H+PS  SL+SL  TL +VHKAS AL+ M
Sbjct:   71 VRKLVQYIREGQNALMYMERCHLQHHIPSGPSLESLHLTLQKVHKASLALRSM 123          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2304.6184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JNQ0_9PHAE4.760e-13043.01KIX_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FX92_ECTSI2.410e-3849.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z449_9STRA2.870e-1451.92Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CHY1_9STRA1.190e-658.49KIX_2 domain-containing protein n=1 Tax=Tribonema ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 303..347
NoneNo IPR availableCOILSCoilCoilcoord: 468..513
NoneNo IPR availableCOILSCoilCoilcoord: 359..418
NoneNo IPR availablePANTHERPTHR44240FAMILY NOT NAMEDcoord: 103..345
NoneNo IPR availablePANTHERPTHR44240FAMILY NOT NAMEDcoord: 399..506
NoneNo IPR availablePANTHERPTHR44240:SF3DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)coord: 103..345
NoneNo IPR availablePANTHERPTHR44240:SF3DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)coord: 399..506

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2304contigH-paniculata_contig2304:10592..21421 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2304.6184.1mRNA_H-paniculata_contig2304.6184.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2304 10592..21422 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2304.6184.1 ID=prot_H-paniculata_contig2304.6184.1|Name=mRNA_H-paniculata_contig2304.6184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1227bp
GSGGVYSGQPGGGGGGGAWPGGGGRGGGQGVNAAAQAAADAVASAMINSR
PGQTVGSVSGQSVGVSQGVGVSSPMVLPSGGVHPGGNGVGGQQTQQLEAA
RKEEMAKAQRSQRAEELRNIYQEDIHYFVQHGSSLLKKLHKTRPASQSSE
QVQKLIQYVKEGHNALLYINRCHDTGHVPSAASLQSLEHTLIRVHKASNA
LQVMIRDHSKSQSNMYLQSPVAHQNQPGTRQFSGPDQHVFSTSGTSIGGQ
ATTSLGGSMNPAAMTPGSSGGVGTPSSSSLEVPTASTLTDLEPIPLPDTY
PISQQQQQQLQQQQQQQQQLQQQQQQQQQQQQQQQQQQQQLQQQQQQQQH
HQILLRRQHAQQQQQQQRLLQQQQQHQQQQQQQQQQMQQHKAAQDRQVQL
ARRQRQQQQQQHQQQLQARQQQQQHQHQQQNQHQHQQAQQAQQAQLHQQL
HQQQGQSPHHPLLQQELQRQQQQQVAQQQLKMEQQQLQHQQLQQQQQQAA
QQQQQQQQVAQQQQVAQQQQHLHNHHQQQQQANAAASTPLGPASSQLTLT
HRPSSDMFWNPGDMVDLEPTPLEDTPLEESLTTGLDAGGGDFDMPVDDFF
DLDPFPLDGMPLEGEDWLSTQSLPDEGSATPGATVKLDPTGGGSSSNAGG
GATTRPGAALPPPPAGVSPGGGGGAAVGVTAPIPTSVGPPTVAVVPQQQQ
QMQSALAQQQLSQAQPQQLPLLQQQQGLPEIENILQQQSVGLDVKLVNGN
GLPDAAGPPVMLSPPQPQTVVDKLAAMVAEGGPAATNLGRLANGVSSSLG
FRAPGSVTRADSPRPYLAGGVDADLRAVESGLGFTDVLGVEDTSAGVTPA
GLRNVGQTLGRQANNAFEAMAAAADTSQGDPAALSDVISHQLGPLPRLLN
GFASGCAALTPPVSHASVGNGAASSAGSLTSLPSAGGDNNSNAPSNSALK
RPKSECSDDNERLGKVPRMESGGIGGGSGPATSAFAGGGDPADNGSAGAG
AGSMSRPENGGGASSSPAAAAPPASNLLARPTTADFRHGGGEEMMALLKA
KVGRIFSLEAEYTHVRSNNGPVPAALGVNGTETLAVAAAGSGGEQDGGGD
VGTAVSTGGDKSGSAAGDNVGTNGLRRVLARLKAVRAGQFVAYIQFDVAG
NEFRPCDVSVLSWGEAGEGSSAAASSAVVKSEGGGGQGSASDGSSSPREF
MNALDGTKPWRTSQHTALIHVSGHAYQ
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