prot_H-paniculata_contig2302.6170.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2302.6170.1
Unique Nameprot_H-paniculata_contig2302.6170.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length124
Homology
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BLAST of mRNA_H-paniculata_contig2302.6170.1 vs. uniprot
Match: D7FMX7_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX7_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 7.220e-8
Identity = 46/128 (35.94%), Postives = 64/128 (50.00%), Query Frame = 0 
Query:    1 MGLPRALGERIWATTFHAFAATVVKHNGDLIWSEPDKGKDRPTKNGHGTGAARFPI--IGNEEQLSLVFQALKRVE----DAAGSKVKKSFSGSNSNAVRGVDATAPGGTGDWSISAFG---GSFGMP 119
            +G+PRA  +R+WA TFH+FAATV+K NG L+W E ++  D           A F +  IG+ EQ+ LV + L   +    D+       S+ G         DA   G    WS +A G   GS+GMP
Sbjct:  192 VGVPRAQADRVWAATFHSFAATVLKQNGHLLWPESEE-SDLGWSAASSRRRATFGLDMIGHAEQVDLVARILADSDRGGWDSRDDLAAASYKG---------DAAFEG---PWSATAGGRSNGSWGMP 306
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2302.6170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMX7_ECTSI7.220e-835.94DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2302contigH-paniculata_contig2302:12456..13195 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2302.6170.1mRNA_H-paniculata_contig2302.6170.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2302 12456..13195 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2302.6170.1 ID=prot_H-paniculata_contig2302.6170.1|Name=mRNA_H-paniculata_contig2302.6170.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MGLPRALGERIWATTFHAFAATVVKHNGDLIWSEPDKGKDRPTKNGHGTG
AARFPIIGNEEQLSLVFQALKRVEDAAGSKVKKSFSGSNSNAVRGVDATA
PGGTGDWSISAFGGSFGMPKAPLG
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