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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 2461 |
| Cds size | 582 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2300.6166.1 >prot_H-paniculata_contig2300.6166.1 ID=prot_H-paniculata_contig2300.6166.1|Name=mRNA_H-paniculata_contig2300.6166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=194bp
MSEPEMEVGMSLYQTLLSKSGEAVGYPEKIGDGDDDEDDEADEDDDESPK SSGKGKGRGRPLKRRKKDGGGKGGDAADGNALVGSKVRKLFPPHGEFDGV AMKYIPSGDGQPPTWLIKYEDGDKEEMTKAELERGKKVYELHYTPSRKNV KLSAAETKDHKLSDKCEAVTLYSQKPPGSRVFGTVQGFKDSFR* back to topmRNA from alignment at H-paniculata_contig2300:144..7150+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2300.6166.1 ID=mRNA_H-paniculata_contig2300.6166.1|Name=mRNA_H-paniculata_contig2300.6166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7007bp|location=Sequence derived from alignment at H-paniculata_contig2300:144..7150+ (Halopteris paniculata Hal_grac_a_UBK monoicous) AGGCGGGAAAGAGGTCGGTAAGCACACCTACTGTAGGCAAGGAGTCGTCC
ACGAAAAGAGCGAAGACGACATTGCAAAGCAAGGGCGCGACGTCGGCATC
ATCATCCGGGAGCGGTTCTTCGGACAAGTCGGATCTTGCAGGCAACAAGA
GCGACATCGGCAAGCTGGTCGCGAAGGAGTTTGAGGAGCACGGTATTTTC
ACGGGAGAGGTTATCTCGGTGAATCGCCAGGAGGGTCATTGGAAAATCAG
GTTCGTGATCGTTACGGTGGTGTATAGAGGATCCAGAGTTAGAATATTCG
TTAGGGTTTTTTTCCCCGTCACCCAAGAGGATCAAGTGTACTGCTTGCTG
TTATAAGAAGCGATTTGTTGGAGACCTGAAACAGGCAATGTCGATTGATA
TGTTGACGGTAGACTTGTGTCAGCCTCGCAAATGACACACTGCATTTCTC
TTACTGCTTGTTATGCATTTGTTATAACCGAAATTTGCAAGCGAAAAAGA
CACCCGCAGCATGGTGGCCCTCGGATGTGACCAGCCGACCATGCCCCTTA
CACTCAACGACCACATGACTGAGAATATGGTTACTTTGTAATAATTCGCC
GCGCCTACCATCGGTACAAAGCATGTGGAAAGGGTTTCGAGGAATGTTCA
CCGTCATGATCCATGATCACGAAAAGAATTAGATAGTACAGCATATGCCA
AACTGTTCCGAGGAACGAGGTCATGATGATGTATTTTTGGGGCTGTCCAG
CATTGTTGGCGTCGTGTCATGGTTTCCAGCATGTTTACATTGTGCCTTGA
TTCCCAGTATGTCTGCAAGATATTCGTCGTTATTGACGAGCGGTTCATTA
CGAGATCTAACTCTCAAAAGTATTTAATACATATGGTGATGATTTATTCT
TATTTCATGTTGGAAATGACTCATAAGGTACGAAGACGGAGACTTGGAGG
ACATGTCGGAGCCGGAGATGGAAGTAGGGATGTCACTCTATCAGACCCTC
CTGTCCAAGTCTGGTGAAGCAGTGGGATACCCTGAGAAGATCGGGGACGG
TGACGATGATGAGGATGACGAAGCTGACGAAGACGATGATGAGTCTCCCA
AGTCTAGTGGCAAAGGTATCTATCGGTCACTAGAAACGGAAGAATACCAT
AGAGTAGGAGAGGAGGGGCGGGTTAATATAATATCGCTTTGCTTTAGCCG
CCACTCAGAGTAGTTGGAATGTTAAAAGTTTTGCAAAAGAGAGTAATCGT
ATATTGTGCTGTAGATCTTGACAAACACCAAGCCTTTTTCTTATCGTTGC
ATGTTGGATCGTTATAAGGTTGGGTTGCTGCCGCTGTTCAAAGAGCTGCA
GGTAGATATTTCAGGTAGCAGATGGCAGAGCTGATATGGTCATGCGTAGC
GTAATTGCAGCCTTGAATGACAACGGAAAATCATAATCCACACGTTAAGT
GACAAGACTGTCGAGGGGTGGCTGTGTAACACATGGAAGAGACCGCACGC
CATGAAGTGAACTTCATGATGTCAAACGAACGGCGTCCTCACCGCGCCAT
GCCATGGCGTAGTAGGTGCCCGCGGACCACGTAGCCAGCCCAGTGGTTCT
CCCTAATCTGAGAAAGTTCCACGTTCGATGCTTTAGTTGACCCCCCTCGT
TAGCGCCTGTCGGGAATAGTTGGGGATTAGATTGCCTAGAACTGGTGGCT
AATGTTGGACTAAGTAACGTTGTTGATTGATCGAATGGATGAACGAATAT
TTGCGATTTGCCTGAACCCATGCCACGCCTGACAATTTGGTTGTCGTACT
CCAGCGCCACAAGCCCAAAAACACCTGCACCCCTCTGGGCGGTGACACTG
TCCGATGCTTGTTATGCTTTGAGACAGCTGATGGCGCTTATAGGCCAATA
GGGCTCTCAATAAAATGATCAATAACCACATGAGAAATTGCCTTACTTTT
TGTATGATAGTAGCGTTATCCGAATATCGTGGAGTGGCGGAGTCACACCA
CGATATTCGTTTCAACGACGATGCGACCGCGGAGCTAATTCAAGACTAAG
CTCAAGTTTTACAAAATCCACTGCCAGAGTGGTGGTATATGCCTGCGTAT
TTCGTATTTGTCTGGTTTCCTTCTGGGAGAATTTGTCCTCTAACCGCGAG
CCTGTCAAACTGGACCGAAGTGTATATATAGACAGACGAGGAGAAGTGAG
AGAAATTTTCAATGTGCTCGAACGTCCCCCTTATATCTTGATCTTTGAAA
AGAGTCGAATACATGCGTATGAAAAAGGGTTTATAAGTCATCTATCTCAG
ACAATCACCTTGTAAAACCAGGGACGTTTTGTCTTTTTTTTTTTTTTTTG
CAAAGCCTGCTCGAATTTTCAACATGATGAAGTACACCCGAAAAGTACTA
TTCCTCTGTAGCGTTTGTTTTGACGTGAACCCATGCTGTACGACATGTCT
GATTGCGTGCGGATTGTGCCTCAGGCAAGGGCAGGGGGAGGCCTCTCAAG
AGAAGGAAGAAGGACGGAGGAGGGAAGGGTGGGGACGCTGCCGACGGGAA
TGCTCTTGTGGGCAGCAAAGTGCGCAAGCTTTTCCCACCACACGGAGAGT
TCGATGGCGTGGTAAGTTGATAGTTTTCAAGTTTTTTTGTGTACGAGCTA
TAAAGTTCAACATTTTTTGTATACCATGTTGATATCTTGATGATGTATGC
CACTCGTCGCATGGTTCAGAAGCGAGAAAGAAGAACCTCTACCGCGGAGC
CTTCGTTAGTACGTTAGTTCGACTTGCCCACTCTGCTAATCTTGATCGAA
TGGTGTTTGTTCCCCTCGGTGCCGTTTTTCAACGTTGGAGCTCTCATTTT
TGTATGCGTTAGTACCCAGCTTAAAATAAGAGGCCTGAGCAAGGGAGAGG
GATATTCCTGTTTCAGAGTATACCGTCATCAACTGCAACGTTGACGAGCG
CGTGGGATTGCTGTCCCCACCGCTCGATAATATAAAGCAAGAAATGACGC
ATTATGCACTTCCCAGCTTCGGAAACTGCAGGTTTCGTCGGAGGATTAAT
TCGACTCCAAAAGTAAGTGAAGCATGCGTGTGTTTGTTTCTGTTGCTGTT
ATGTTATAGGCTATGAAATACATCCCGTCTGGAGACGGTCAACCTCCCAC
CTGGCTGATAAAATATGAGGATGGAGACAAGGAAGAGATGACCAAGGCAG
AGGTTAGTCAGCTGTAAACTAGCGCTTTCGTGGCTGTTGTCGCGTTTTGA
TATGGTTGTGTGTTTTGTGTTTCTTTTGGACGTTTTTTGTTTTTTTTCTG
ATTCGGTTGTTTTCTTTACCTTTGCTTCTTTTTTTTTTGTCAATTTTTTT
GTTCGTGGTCGTGACCTTTCTCTTTTTTTCTTTTTTTTGTCAATTTGGAT
GTTTTTAACTCTGTAGTCCGCTTCGCTGGTATTTATTGCCAATTTAGTTC
TCTGTCGGTTTGTATCACCAGTCTTGATTAGATCGCGTATGTTGAATTAT
TGACGGTTTCAATGACAAACTGACTGCTGCTGCTGCTGCACGTTCAATGT
TCAAACTATGCGGAAAATTGTGCGGAAAAGTTATGGCATATGGTGTAAAG
AGGTATGGGTGCAATCAAGATAGGCAAAACATTCAAATGAATGAATGGCC
CAAGGCCGAACACAATTCTGCTGCGACGTTAATTACTTGCTTAGTCAGCT
TGTAATGCTGTTAACGCAAGCCAGACGTGAATTATTCACTCCCCCCCACC
TGCATGAACATGAGTACGTGAAATACTCGAAAAGTGTTCACCTAAGTTTC
AGAATTTGTGGAATAGATTATGACACATGAATCAAATGTTGACCTCTGCT
TGCTTTTCTTGATATTATTAGGAACAATCGTCCATGTTTCGGGGCATGTA
TAATGAATTTGCCTATATTGTGCCGTCAGGCAAATATTTTTCCATTTGTG
TCGCGAATGCTCAAAATAATCGCATTTGTCAGGGGGGTGAATCTTTTGCC
AAGTTTTGTTTTTACGGGTTAGTTCATGTAAGTAGGCGTTCTGCTTGTGA
GTTTGTTTTCTGTTTGTTTCGTTTCTGTGTGCAGACGCCACGTACGGTGC
GAGGTACTCCTTTTTCAGTCCCTATGCGTCCGGGGGTGTTATTTGACGAA
TGTGCCGAAGGTAGTGCAGCCGCACCAGGTGCAGTGTTCATGGTCATGTA
CAAGATTACTTGTGACTGCTGAAAAACGTGCGGTTATGACCCCCACCAAC
CTAACTGGATCGTACAACACACAATCGTCGACCTCCTACCATAGCGAATG
CTTGAGTGTGTAGTAAGCAATCTGTGTTCTCTCCGGCGTGTTTTTGTATC
TTTGGTGTGATCATATGATGTGGCCGTAAACAGCTGGAGAGAGGAAAGAA
GGTCTACGAACTCCATTACACGCCTTCGAGGAAGAACGTGAAGTTGAGCG
CTGCGGAAACGAAGGACCACAAGCTCTCGGACAAATGCGAGGCGGTGACC
CTATACAGCCAGAAGCCCCCAGGTTCCCGCGTATTCGGGACGGTACAGGG
ATTCAAGTGAGAAAACTAATGTTGCTAATGTGTTGGACTGGTGGGGAGCG
GCTACTAGTGGACCGTGGGGGGTCTTTTTCTGGGAGAGTTCGGAAAATAT
AATGGCGCCCCGCTGAATCGAACCTACAGACGTGAAAGCGCGAGCATCCA
CCAGTCATTTCGCTGAAAATATGTTGATTTTGCTTTGTGTTACTGGTCGC
TGCAGCCGTTGTGTTTGTCTTTTGTACGAGAAGTTGTCCTGGTGATGCCT
CGCGTTCTTCTGGCACTACTCAGAACGAGGCATTGACGACGTGGAGAGAA
CAGAGAGTGCTTGCTGGGTGTGGTATATACATTGGGCGCCTTCGAATGAG
GTCATCTGCGCTGTGTAGTAGCGTACTGCATTCCCTCCTGGTTGTTACAT
AAGAGAGGCTAGCTGCCCACGACAACAGCGCTATTTGACCCGAAGTATTA
TCCCTTCTCCCACGTTGATCGGGTGATTGATACCAAGTACAGTAGTGCGT
GCAGCGAGGAGATGAAGCAACATTCATCACCTCAATAGTTAGAGGTATCA
ATTTCAATGCGACTGATGAAAGAGAGGGGCTTTATTAGGTGAATTATCAG
GGATGGCAATTCGGACTAGCCTCTCCTACTTGACATTTTGCCCTTGAAAA
GGGCCCGATTGCGGCCCATATCCACACTGATCAAAAGTCTCCATTACCAG
AATTTTATGCACGTCCACAATTGTGATCTGATGCAGTGTTTCAGATCCAA
CTTTTTATCATGTACAAGACCTCTAAATTTACTGGAAGCAACTTGTCGTT
TTTTTCGTCATTTTTCATGTCTTTTTTTATCATCTAGGGACAGCTTTCGT
TAAGTCTCGCACTATTGTACTTCTGTACGAGGCTCATGAAGGGCTCCAGG
GTTTGCGACAGGAGGACTGGAGCATGCATGCGCGGAGGGAGGGAGGGAGA
CGATGAACTGGTATGCAGTAGTGCGAAGGGTATCTAGCCTCTCCTATTGT
GACCACGGGAAACAAGGCCACGATCGGACCGCCGATGTTGGGAATGGCTG
AGCATTTGTATCATGTTTTCGGATTTTGTTTTTTAGTTTGATGCGGTTAT
TGGTGTGGGTACAGAGCTACGAAGTTGGTGGAAGCGAAGGGGAAACAATC
AACTCAATTCTATCAGGACACGGAAAGCTAAAAACAATATTTCGGTCCCT
CGTTTTTTTGCTTCGGTGTAGTGGTGTTTGTTGGCACGCCAAGGCTCGTG
TAATATTATTGTTATTACAGAGTCGGGGAGATAGAAGAGTGTGGCGACAG
TTTTTCTCGTTCGTTGTTGACACCATGGTACAATAGGCAGGGGAGGAATA
GGGGACGATGGGCGAAGATAGGCTAAGTTGCGCCTCTGTATTTCTACTCT
CGCCGGAAAATCGCCAGTGTGTGGCGAAGTAGTAAGATGAATGGTTTGCC
GGCTATTTTGTACATGTACAAGCTTTAGAATGAGGAAGAAACAGCGTTGG
CGGCTTTTGGAAGAGCGTTTCGTTGGGTGTTTTCCTCCAAGCAAGAAAGA
GGCGGGGAAATTGTATAAGAATCGAGAGTCTGCAAGGGTAGAAGGGAGAA
TTATTGCGGTTGAGGAGTCCAGAACAGCATTCTTAACTGGCCTGGACGAG
CACAGCGAGTCGACCTGCTGTAGCGCAACCAGCATTCCGAAACGGCTGTC
GAATATGGAAAGCGGTTCGACCCAACGGTTTCATGGGCTGCTGCTCTAAA
TTTATGCGTTTGGAGTGGTTCGGCGTATACGTCGAGGTGTAAACAAGGGG
AGGAAGGTCACTCGCGCCGTGCTCCAATCCAAGCCCAGCGATGGTGCTCT
CGTCTGCACCATCACGCTGCCTCCCCTTTAATCTTCGTGGAATGGCCCTT
GTGAGGGTGGGTGGGTGTTGTTTTACAACAGAGGGTATGCCGTACGCCGG
ACATGAACAGAGAGACGGCGAGACGAGGTAGGGCGATTGTGGCCGACAGA
GTTTGCGCAAGGTCAAAATTTCTGTATGTTTTTTAGGTACAGTACTTGTA
CAGGCCCGAAATAGGATGGACTGTACCGACCTTACGGGGGAATTGACGTA
ATTCAGGAACATAGGGGTCGAGGGGCCTTCACTACTGAATGTACCAAGCG
AATGAGTGCTGGAAAAACGCACGGTCATTTGTGTTTTGTGCTTGGTTAAT
GACTTGTAGCTTGGTTTGGGAGGGAAATATCTAGCTAATGGTCTCGTCGA
CGTTCACTGTCGTTGTACTTCCATGTACCAGTCAGAGCACCCTCGAAACA
TGTGCTGCGTTACACCAGGCGAACCACTTTCGATCTCGTGTCTTGGAGAC
AATCAGTCGATCGCAATGCATACATATTCATATACACAAAAACTCCTGTG
GAGATGAAAAAGATGCTCTGCTTGTAATAACCCCATGTAATACAAAAGAT
TTGGGCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig2300:144..7150+ >mRNA_H-paniculata_contig2300.6166.1 ID=mRNA_H-paniculata_contig2300.6166.1|Name=mRNA_H-paniculata_contig2300.6166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1164bp|location=Sequence derived from alignment at H-paniculata_contig2300:144..7150+ (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGTCGGAGCCGGAGATGGAAGTAGGGATGTCACTCTATCAGACCCTCCT GTCCAAGTCTGGTGAAGCAGTGGGATACCCTGAGAAGATCGGGGACGGTG ACGATGATGAGGATGACGAAGCTGACGAAGACGATGATGAGTCTCCCAAG TCTAGTGGCAAAGATGTCGGAGCCGGAGATGGAAGTAGGGATGTCACTCT ATCAGACCCTCCTGTCCAAGTCTGGTGAAGCAGTGGGATACCCTGAGAAG ATCGGGGACGGTGACGATGATGAGGATGACGAAGCTGACGAAGACGATGA TGAGTCTCCCAAGTCTAGTGGCAAAGGCAAGGGCAGGGGGAGGCCTCTCA AGAGAAGGAAGAAGGACGGAGGAGGGAAGGGTGGGGACGCTGCCGACGGG AATGCTCTTGTGGGCAGCAAAGTGCGCAAGCTTTTCCCACCACACGGAGA GTTCGATGGCGTGGCAAGGGCAGGGGGAGGCCTCTCAAGAGAAGGAAGAA GGACGGAGGAGGGAAGGGTGGGGACGCTGCCGACGGGAATGCTCTTGTGG GCAGCAAAGTGCGCAAGCTTTTCCCACCACACGGAGAGTTCGATGGCGTG GCTATGAAATACATCCCGTCTGGAGACGGTCAACCTCCCACCTGGCTGAT AAAATATGAGGATGGAGACAAGGAAGAGATGACCAAGGCAGAGGCTATGA AATACATCCCGTCTGGAGACGGTCAACCTCCCACCTGGCTGATAAAATAT GAGGATGGAGACAAGGAAGAGATGACCAAGGCAGAGCTGGAGAGAGGAAA GAAGGTCTACGAACTCCATTACACGCCTTCGAGGAAGAACGTGAAGTTGA GCGCTGCGGAAACGAAGGACCACAAGCTCTCGGACAAATGCGAGGCGGTG ACCCTATACAGCCAGAAGCCCCCAGGTTCCCGCGTATTCGGGACGGTACA GGGATTCAACTGGAGAGAGGAAAGAAGGTCTACGAACTCCATTACACGCC TTCGAGGAAGAACGTGAAGTTGAGCGCTGCGGAAACGAAGGACCACAAGC TCTCGGACAAATGCGAGGCGGTGACCCTATACAGCCAGAAGCCCCCAGGT TCCCGCGTATTCGGGACGGTACAGGGATTCAAGGACAGCTTTCGTTAAGG ACAGCTTTCGTTAA back to top
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