mRNA_H-paniculata_contig22909.6126.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig22909.6126.1 vs. uniprot
Match: D8LN71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN71_ECTSI) HSP 1 Score: 385 bits (989), Expect = 1.680e-123 Identity = 190/195 (97.44%), Postives = 194/195 (99.49%), Query Frame = 1
Query: 1 QDFYRAFRAKEKTSFHAAKLFAMECFNILPVKVHWRLYLEIADLARRENRFVEARKLYRKVTKLQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIV 585
+DFYRAFRAKEKTSFHAAK+FAMECF +LPVKVHWRLYLEIADLARRENRFVEARKLYRKVTK+QPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIV
Sbjct: 58 KDFYRAFRAKEKTSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFVEARKLYRKVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIV 252
BLAST of mRNA_H-paniculata_contig22909.6126.1 vs. uniprot
Match: A0A6H5KEQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ7_9PHAE) HSP 1 Score: 380 bits (976), Expect = 4.130e-120 Identity = 190/197 (96.45%), Postives = 194/197 (98.48%), Query Frame = 1
Query: 1 QDFYRAFRAKEKTSFHAAKLFAMECFNILPVKVHWRLYLEIADLARRENRFVEARKLYRK--VTKLQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIV 585
+DFYRAFRAKEKTSFHAAK+FAMECF +LPVKVHWRLYLEIADLARRENRFVEARKLYRK VTK+QPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIV
Sbjct: 222 KDFYRAFRAKEKTSFHAAKVFAMECFKMLPVKVHWRLYLEIADLARRENRFVEARKLYRKASVTKMQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIV 418
BLAST of mRNA_H-paniculata_contig22909.6126.1 vs. uniprot
Match: A0A7S4DG20_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG20_HETAK) HSP 1 Score: 279 bits (713), Expect = 8.090e-92 Identity = 138/195 (70.77%), Postives = 159/195 (81.54%), Query Frame = 1
Query: 1 QDFYRAFRAKEKTSFHAAKLFAMECFNILPVKVHWRLYLEIADLARRENRFVEARKLYRKVTKLQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIV 585
++FYR FRAKEK SF AAK FA CF+ LP KVHWRLYLEIA+L++RENRF EAR+LY+KV +LQP+A+QGW+EY KLEEE G L CS+IL RGL FC YSE+LLIKA+K ER G L AR LL+RLK G+E VWRTVLEGALLEAR+G + VARKV KYLM VPWYGPIY+EAFRLEEK EHF SAL I+
Sbjct: 33 KEFYRQFRAKEKASFAAAKAFAATCFDRLPQKVHWRLYLEIAELSKRENRFEEARQLYQKVCRLQPYAAQGWLEYAKLEEEGGHLETCSRILHRGLMFCHYSESLLIKAIKHFERLGQLRPARVLLARLKRAGVEKVWRTVLEGALLEARAGRSAVARKVFKYLMQQVPWYGPIYFEAFRLEEKNEHFRSALQII 227
BLAST of mRNA_H-paniculata_contig22909.6126.1 vs. uniprot
Match: A0A7S2Y4L6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y4L6_9STRA) HSP 1 Score: 254 bits (649), Expect = 7.540e-77 Identity = 125/197 (63.45%), Postives = 154/197 (78.17%), Query Frame = 1
Query: 1 QDFYRAFRAKEKTSFHAAKLFAMECFN--ILPVKVHWRLYLEIADLARRENRFVEARKLYRKVTKLQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIV 585
+DFYRAFR +E+ SF A+ A E LP +HWR+YLE+ADLARR NR+VE+RKLY+KV +LQPFASQGW+EY KLEE+ G ++R S IL GL +CEYSETLL +AVK +E+ GNL AR +L+RLKHVGI+ VWRTVLEGALLEAR+GN D+AR+VLKYLM HVPWYGP+Y EA++LE H A+ IV
Sbjct: 5 KDFYRAFRVEERHSFQKAEALAQEALKDGSLPESIHWRVYLELADLARRSNRYVESRKLYQKVCQLQPFASQGWLEYSKLEEDCGFMNRVSNILHAGLEYCEYSETLLTRAVKHQEKMGNLSSARGILARLKHVGIDKVWRTVLEGALLEARAGNHDMARRVLKYLMHHVPWYGPLYLEAYKLERDQGHPMDAMHIV 201
BLAST of mRNA_H-paniculata_contig22909.6126.1 vs. uniprot
Match: A0A4D9D155_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D155_9STRA) HSP 1 Score: 258 bits (658), Expect = 1.500e-75 Identity = 126/195 (64.62%), Postives = 156/195 (80.00%), Query Frame = 1
Query: 1 QDFYRAFRAKEKTSFHAAKLFAMECFNILPVKVHWRLYLEIADLARRENRFVEARKLYRKVTKLQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIV 585
+DFYR FR KE+ SF AAK +AM CF +LP+KVHW+L+LE+ADLA+RENR EAR+LYR+V +LQP A+Q W+ Y ++EEE GD+ R IL++GL FCEYSE+LL +A+K ER G+L AR LLSRL+HV I+ VWRTVLEGALLEAR+GN VARKV +YL+ VPWYGPIY EAFRLEEK + +ALAIV
Sbjct: 960 KDFYRQFRIKERLSFEAAKDYAMACFELLPLKVHWKLFLELADLAKRENRIAEARRLYRRVCRLQPHAAQAWLVYSRMEEECGDMERADGILQKGLLFCEYSESLLARALKHAERKGDLRFARSLLSRLRHVSIDKVWRTVLEGALLEARAGNDRVARKVFEYLIGCVPWYGPIYNEAFRLEEKCQGHAAALAIV 1154
BLAST of mRNA_H-paniculata_contig22909.6126.1 vs. uniprot
Match: A0A7R9VVS4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVS4_9STRA) HSP 1 Score: 231 bits (589), Expect = 1.800e-74 Identity = 108/156 (69.23%), Postives = 133/156 (85.26%), Query Frame = 1
Query: 79 NILPVKVHWRLYLEIADLARRENRFVEARKLYRKVTKLQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLE 546
N LP ++HWR++LE+ADLA+R NRF EAR+LYRKV LQP+ASQGW+E+ KLEEE GDL +C+ +L GL++CEY+E LL KA+K EER G+L AR+LL+RLKHVGIE VWRTVLEGALLEAR+GN +AR+VLKYLM HVPWYGP+Y EA+RLE
Sbjct: 2 NTLPKQLHWRVHLELADLAKRANRFDEARRLYRKVCTLQPYASQGWLEFSKLEEESGDLDKCACLLNEGLSYCEYNENLLTKAIKHEERMGDLTRARQLLARLKHVGIEQVWRTVLEGALLEARAGNVAMARRVLKYLMHHVPWYGPLYLEAYRLE 157
BLAST of mRNA_H-paniculata_contig22909.6126.1 vs. uniprot
Match: B7FTG6_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FTG6_PHATC) HSP 1 Score: 246 bits (629), Expect = 3.030e-74 Identity = 117/184 (63.59%), Postives = 152/184 (82.61%), Query Frame = 1
Query: 1 QDFYRAFRAKEKTSFHAAKLFAMECFN--ILPVKVHWRLYLEIADLARRENRFVEARKLYRKVTKLQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLE 546
++FYR FR++E+ SF A+ FA++ + LPV VHWR+YLE+ADLA+R NRFVEAR LY++V + QP+ASQGW+EY KLEEE G ++R + IL GL +CEYSE LL +AVK +E+ GN++GARELL+RLKHVGI+ VWRTVLEGALLE+R+GN +AR+VLKYLM HVPWYGP+Y EA++LE
Sbjct: 162 KEFYRCFRSEERFSFQKAEEFALDALDNGSLPVSVHWRVYLELADLAKRSNRFVEARSLYQRVCQQQPYASQGWLEYSKLEEECGHMNRVTNILHAGLEYCEYSENLLTRAVKHQEKMGNVNGARELLARLKHVGIDKVWRTVLEGALLESRAGNAFMARRVLKYLMHHVPWYGPLYLEAYKLE 345
BLAST of mRNA_H-paniculata_contig22909.6126.1 vs. uniprot
Match: W7TFT0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TFT0_9STRA) HSP 1 Score: 253 bits (645), Expect = 7.920e-74 Identity = 123/195 (63.08%), Postives = 155/195 (79.49%), Query Frame = 1
Query: 1 QDFYRAFRAKEKTSFHAAKLFAMECFNILPVKVHWRLYLEIADLARRENRFVEARKLYRKVTKLQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIV 585
+DFYR FR KE+ SF AAK +A+ CF +LP++VHW++ LE+ADLA+RENR EAR+LYR+V +LQP A+Q W+ Y ++EEE GD+ R IL++GL FCEYSE+LL +A+K ER G+L AR LLSRL+HV I+ VWRTVLEGALLEAR+GN VARKV +YL+ VPWYGPIY EAFRLEEK + +ALAIV
Sbjct: 610 KDFYRQFRIKERLSFEAAKDYAIACFELLPLRVHWKILLELADLAKRENRIAEARRLYRRVCRLQPHAAQAWLVYSRMEEECGDVERADGILQKGLLFCEYSESLLARALKHAERKGDLRFARSLLSRLRHVSIDKVWRTVLEGALLEARAGNNRVARKVFEYLIGCVPWYGPIYNEAFRLEEKCQGHAAALAIV 804
BLAST of mRNA_H-paniculata_contig22909.6126.1 vs. uniprot
Match: A0A7S4ITD3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4ITD3_9STRA) HSP 1 Score: 252 bits (644), Expect = 1.130e-73 Identity = 125/206 (60.68%), Postives = 158/206 (76.70%), Query Frame = 1
Query: 1 QDFYRAFRAKEKTSFHAAKLFAMECFN-----------ILPVKVHWRLYLEIADLARRENRFVEARKLYRKVTKLQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIV 585
++FYR FR KE++SF A+ FA+ +LP +VHWR++LE+ADLA+R N+F EAR++YRKV LQP+ASQGW+E+ KLEEE G+L RC+ +L GL++CEY+E LL KA+K EER GNL AR+LL+RLKHVGIE VWRTVLEGALLEAR+GN +AR+VLKYLM HVPWYGP+Y EA+RLE A+ ALAIV
Sbjct: 1013 KEFYREFRQKERSSFVEAEEFALRSLGNDEDKTVVEAAVLPKQVHWRVHLELADLAKRANKFDEARRVYRKVCTLQPYASQGWLEFSKLEEESGNLERCASLLSEGLSYCEYNENLLTKAIKHEERMGNLTRARQLLARLKHVGIEKVWRTVLEGALLEARAGNVGMARRVLKYLMHHVPWYGPLYLEAYRLERDADRPIEALAIV 1218
BLAST of mRNA_H-paniculata_contig22909.6126.1 vs. uniprot
Match: A0A6S8EA78_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8EA78_9STRA) HSP 1 Score: 249 bits (637), Expect = 3.150e-73 Identity = 123/208 (59.13%), Postives = 152/208 (73.08%), Query Frame = 1
Query: 1 QDFYRAFRAKEKTSFHAAKLFAMECF-------------NILPVKVHWRLYLEIADLARRENRFVEARKLYRKVTKLQPFASQGWVEYCKLEEEFGDLSRCSQILRRGLTFCEYSETLLIKAVKQEERAGNLDGARELLSRLKHVGIENVWRTVLEGALLEARSGNTDVARKVLKYLMTHVPWYGPIYYEAFRLEEKAEHFESALAIV 585
++FYR FR KEK SF AA+ +A +C + LP ++HWR+YLE+ADLA+RENRF EAR+LYR V KLQP+A QGW+EY K+EEE G L C +IL GL +C +SE+LL KA+K EER GNL AR LL RL+H+ ++ WRT+LEGALLEAR+GN VARKV KYLM +VPWYGPIYYEA R EEK E F A++IV
Sbjct: 337 KEFYREFRLKEKESFEAAQKYANQCLQPEQYVGSGEANPHSLPEELHWRIYLEMADLAKRENRFTEARRLYRTVNKLQPYAPQGWLEYSKMEEECGRLHHCQKILHEGLQWCNFSESLLTKAIKHEERMGNLVAARALLGRLRHIHVDKAWRTILEGALLEARTGNVVVARKVFKYLMRNVPWYGPIYYEAARFEEKNEEFTRAISIV 544 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22909.6126.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig22909.6126.1 >prot_H-paniculata_contig22909.6126.1 ID=prot_H-paniculata_contig22909.6126.1|Name=mRNA_H-paniculata_contig22909.6126.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=222bp QDFYRAFRAKEKTSFHAAKLFAMECFNILPVKVHWRLYLEIADLARRENRback to top mRNA from alignment at H-paniculata_contig22909:556..3875- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig22909.6126.1 ID=mRNA_H-paniculata_contig22909.6126.1|Name=mRNA_H-paniculata_contig22909.6126.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3320bp|location=Sequence derived from alignment at H-paniculata_contig22909:556..3875- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig22909:556..3875- >mRNA_H-paniculata_contig22909.6126.1 ID=mRNA_H-paniculata_contig22909.6126.1|Name=mRNA_H-paniculata_contig22909.6126.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1332bp|location=Sequence derived from alignment at H-paniculata_contig22909:556..3875- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |