mRNA_H-paniculata_contig229.6120.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig229.6120.1 vs. uniprot
Match: D7FSG2_ECTSI (WD-repeat protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG2_ECTSI) HSP 1 Score: 643 bits (1658), Expect = 1.690e-222 Identity = 336/503 (66.80%), Postives = 386/503 (76.74%), Query Frame = 2
Query: 38 MALWRDLERRRCGILSPSSFADRLRPARARRLELSVDLEIKSPHRGTITWLDVDRAEERYLITGGADCTIAVFDLDGASEKQES-PNSPSTGAIARRN---INTVSARRKQQANKRRPRELRRIGHTKRTPLSQ--GGAPGQAYGGHYHSVSVVRWYPVDTGLFISGGMDGVVKLWDTNALDVVLEFNFQEKVFAAAMSGASGQHHLIAVGNDSTQVRLCDIRSGAFSHALTGHSEAVWACAWSPISEFLLATGSADQTARLWDIRRSGASSCLISLDQHRDEEEGDEGHYSFVS--RATSGKXXXXXXXDGG------GVAARQRGYMKHYKLAPQASRVSKFARAHSGPVNSMCFTPNGLHLLTAGTDNRLRLWEVETGRNTMMNYLQTKNRRRRPFGMAVAQPAGRRSETVFFPNDKSGDVLAFPLHSVDGQPSAQLRAHFDPVQCCAYRPRTQELVSGGADGLILLWSPGAPSFASRASYLPGPANGLDGRAGGKKRRL 1504
MAL+R LERRR G+L S AD+LR +R +L+L +++EIKSPH G +TWLDVD AEERYL+TGGADCT+AVFDLDGA EK+ S + + RR+ TV+ARR RRP+ LR +G T R PLSQ G +YGGH HSVSVV+WYPVDTGLF+SG MDGVVK+WDTN L VVLEF+F++KV++A+MS +GQHHLIAVG+DS Q RLCDIRSGAF+HAL+GHSEAV ACAWSP SEFLLATGSADQT RLWDIRRSGAS+CLISLDQH+++ R SG D G G R+RGY+KH KLAP ASR SKFARAH+GPVNS+CF P GLHLLTAGTDNRLRLWEVETGRNTM NYLQTKN+RRRPFGMAV +PAGRRSETVFFPNDKSGDVL FPLH+ DG+P +LR HFDPVQCCAYRPRTQE+V+ GADGL+LLWS P +ASRASYLP P L AGG KRRL
Sbjct: 1 MALFRALERRRAGVLRQRSTADKLRTSRVSQLDLDINVEIKSPHHGPVTWLDVDSAEERYLLTGGADCTVAVFDLDGAGEKRPSLASGDDNNSGPRRHGPAAETVAARR------RRPKVLREVGRTPRVPLSQSSGXXXXXSYGGHRHSVSVVQWYPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTTGQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTVRLWDIRRSGASACLISLDQHQEDXXXXXXXXXXXHTVRCGSGVGGSADGSDDGRGSGVRGSGKRKRGYLKHIKLAPHASRASKFARAHAGPVNSLCFAPEGLHLLTAGTDNRLRLWEVETGRNTMTNYLQTKNKRRRPFGMAVGRPAGRRSETVFFPNDKSGDVLVFPLHTPDGRPKGKLRGHFDPVQCCAYRPRTQEVVTCGADGLVLLWSAAGPPWASRASYLPPP---LAAGAGGTKRRL 494
BLAST of mRNA_H-paniculata_contig229.6120.1 vs. uniprot
Match: A0A1Y1IA25_KLENI (Putative WD-40 repeat family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IA25_KLENI) HSP 1 Score: 276 bits (706), Expect = 2.000e-81 Identity = 175/467 (37.47%), Postives = 240/467 (51.39%), Query Frame = 2
Query: 44 LWRDLERRRCGILSPSSFADRLRPARARRLELSVDLEIKSPHRGTITWLDVDRAEERYLITGGADCTIAVFDLDGASEKQESPNSPSTGAIARRNINTVSARRKQQANKRRPRELRRIGHTKRTPLSQGGAPGQAYGGHYHSVSVVRWYPVDTGLFISGGMDGVVKLWDTNALDVVLEFNFQEKVFAAAMSGASGQHHLIAVGNDSTQVRLCDIRSGAFSHALTGHSEAVWACAWSPISEFLLATGSADQTARLWDIRRSGASSCLISLDQHRDEEEGDEGHYSFVSRATSGKXXXXXXXDGGGVAARQRG-----YMKHYKLAPQASRVSKFARAHSGPVNSMCFTPNGLHLLTAGTDNRLRLWEVETGRNTMMNYLQTKNRRRRPFGMAVAQPAGRRSETVFFPNDKSGDVL-AFPLHSVDGQPSAQLRAHFDPVQCCAYRPRTQELVSGGADGLILLWSPGAPS 1426
+W+ L+ R+ G P A R+ +R L+LS EI S HR +T L VD E+RYL++G +D ++AV D ++ ++ G + + KRT G H ++VS V WYP+DTGLF+SG D VK WDTN L V + F+ KVFA AMS + H LIAVG+ T+VRLCD+ SG F+H+L GH +AVWA WS SEF+L TG D R WDIRR+G C LDQH+ + G + G ++RG + H +A R S AH PV S+ TP+G +L + G D+RLRLW++ETG NT++NY T+ + R +AV+ S V+ P SG V+ AF + S G+P A LR HF+ V CC ++ QE+ SGG D IL+W P AP+
Sbjct: 37 MWKHLQDRQTGSEKPQVTAARIAKSRLLALDLSTSKEISSGHRSGVTSLQVDNTEQRYLLSGASDGSLAVHDTQVPTKYEQD------GTAVHERLFKID---------------------KRTE-----------GAHQYAVSSVSWYPIDTGLFVSGSFDDTVKCWDTNTLQVEMTFSLPAKVFAVAMSPVAVTHTLIAVGSGDTRVRLCDVSSGGFAHSLAGHRDAVWAVTWSLSSEFVLMTGGCDGAIRFWDIRRAG---CFKVLDQHKTQ----MGRRPPPRPQDTRTDPPNALQQREGRGPKRRGAPDRPQLLHPGMASALDRTS----AHDAPVTSLQGTPDGQYLFSTGADSRLRLWDIETGNNTLVNYRTTRGKANRGTQIAVSPD----SSHVYQP---SGSVIQAFDVWS--GEPHATLRGHFEGVNCCTFQAHDQEMYSGGNDRQILVWEPPAPA 445
BLAST of mRNA_H-paniculata_contig229.6120.1 vs. uniprot
Match: A0A7N0ZUG6_KALFE (Uncharacterized protein n=4 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0ZUG6_KALFE) HSP 1 Score: 271 bits (692), Expect = 1.410e-79 Identity = 184/504 (36.51%), Postives = 252/504 (50.00%), Query Frame = 2
Query: 44 LWRDLERRRCGILSPSSFADRLRPARARRLELSVDLEIKSPHRGTITWLDVDRAEERYLITGGADCTIAVFDLDGASEKQESPNSPSTGAIAR-RNINTVSARRKQQANKRRPRELRRIGHTKRTPLSQGGAPGQAYGGHYHSVSVVRWYPVDTGLFISGGMDGVVKLWDTNALDVVLEFNFQEKVFAAAMSGASGQHHLIAVGNDSTQVRLCDIRSGAFSHALTGHSEAVWACAWSPISEFLLATGSADQTARLWDIRRSGASSCLISLDQH---------RDEEEGDEGHYSFVSRATSGKXXXXXXXDGGGVAARQR--GYMKHYKLAPQASRVSKFARAHSGPVNSMCFTPNGLHLLTAGTDNRLRLWEVETGRNTMMNYLQTKNRRRRPFGMAVAQPAGRRSETVFFPNDKSGDVLAFPLHSVDGQPSAQLRAHFDPVQCCAYRPRTQELVSGGADGLILLWSPGAPSFASRASYLPGPANGLDGRA-GGKKRRLVKED 1516
+W+D+ R G L P+SF+ RL+ R ++LS E SPH+G I L VD AE RYL++G AD ++AVFD+ GA++ + G IA+ ++I TV L + G H ++VS WYP+DTGLFI+G D + +WDTN VV+ F KV+ AMS + H LIA G + QVRLCDI SGAF+H L+GH + V + WS SE++L TG D R WDIRR+G+ L R E E S S T+ D +R + + +L P A AH G V + T +G++LL+AG+D+RLRLW+VE+GRNT++NY + + +P +AV Q S VF P S V AF S G S R H++ V CC + QEL +GG D IL+WSP P F S A+ +D + GG +RR ED
Sbjct: 1 MWKDIADRESGRLRPNSFSSRLKSTRVASIQLSNHKEFVSPHKGAINCLQVDLAEGRYLLSGAADASVAVFDVQGATDYEGG------GLIAKHKSIFTVDK------------------------LHESG--------HQYAVSSAIWYPIDTGLFITGSYDNFINVWDTNTTQVVMNFKMPGKVYRTAMSPLANSHMLIAAGTEDVQVRLCDISSGAFTHMLSGHRDGVMSIEWSMSSEWVLMTGGCDGAIRFWDIRRAGSFRVLDQSQSQLGRRTPILRRCESEKVLTSRSSPSSHTATNKSRIPLTDSKQSPSRNQRXXXXRKQRLHPGLLSTQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRLRLWDVESGRNTLVNYETARLQGTKPMQLAVTQD----SALVFVPCMSS--VKAFDFWS--GSISKTFRGHYESVNCCCFNFHDQELYTGGNDRQILVWSP--PRFTS--------ADQMDTQVEGGGRRRYPLED 448
BLAST of mRNA_H-paniculata_contig229.6120.1 vs. uniprot
Match: A0A835YTD9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTD9_9STRA) HSP 1 Score: 266 bits (679), Expect = 1.650e-78 Identity = 168/451 (37.25%), Postives = 219/451 (48.56%), Query Frame = 2
Query: 59 ERRRCGILSPSSFADRLRPARARRLELSVDLEIKSPHRGTITWLDVDRAEERYLITGGADCTIAVFDLDGASEKQESPNSPSTGAIARRNINTVSARRKQQANKRRPRELRRIGHTKRTPLSQGGAPGQAYGGHYHSVSVVRWYPVDTGLFISGGMDGVVKLWDTNALDVVLEFNFQEKVFAAAMSGASGQHHLIAVGNDSTQVRLCDIRSGAFSHALTGHSEAVWACAWSPISEFLLATGSADQTARLWDIRRSGASSCLISLDQHRDEEEGDEGHYSFVSRATSGKXXXXXXXDGGGVAARQRGYMKHYKLAPQASRVSKFARAHSGPVNSMCFTPNGLHLLTAGTDNRLRLWEVETGRNTMMNYLQTKNRRRRPFGMAVAQPAGRRSETVFFPNDKSGDVLAFPLHSVDGQPSAQLRAHFDPVQCCAYRPRTQELVSGGADGLILLWS 1411
E R CG + ++ + + RRLEL+ D+E++SPHR ++WLDVD++E RYL+T AD IA+FDLD K ++ G + RR ++R+ RTP + A GH ++ S V+WYPVD GLFIS GMDGVVK WDTN VVL+FN VFAAA+ +S GHS VWA AWSP E+LLA+G+ D RLWDIRRSGAS+CL+ LDQ++ TAG RL LWE +G NT+ +YL TKNRR +PF MA A+ + VFFP + +GDVL FP+++ DG+ LR HF+ VQ CAYR TQEL++ GADGL+LLWS
Sbjct: 17 EERLCGAVLGATRPRQSQQQHRRRLELNTDVELQSPHRCPVSWLDVDQSEGRYLLTAAADGAIALFDLDS---KGVITDADGGGQLRRR--------------------IKRLSLAPRTPPAAHRTAEAALRGHCYAASAVQWYPVDNGLFISAGMDGVVKAWDTNTFKVVLDFNLPAMVFAAALPPSSA-----------------------------GHSGEVWAVAWSPADEYLLASGATDCRVRLWDIRRSGASACLMILDQNQ----------------------------------------------------------------------------TAGEYTRLLLWETPSGANTLTHYLGTKNRRVKPFRMAPAE------DLVFFPVEGTGDVLGFPVNTHDGRAECALRGHFETVQACAYRATTQELITSGADGLVLLWS 333
BLAST of mRNA_H-paniculata_contig229.6120.1 vs. uniprot
Match: A0A0K9QC50_SPIOL (Uncharacterized protein n=3 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QC50_SPIOL) HSP 1 Score: 265 bits (677), Expect = 2.420e-77 Identity = 173/477 (36.27%), Postives = 240/477 (50.31%), Query Frame = 2
Query: 44 LWRDLERRRCGILSPSSFADRLRPARARRLELSVDLEIKSPHRGTITWLDVDRAEERYLITGGADCTIAVFDLDGASEKQESPNSPSTGAIARRNINTVSARRKQQANKRRPRELRRIGHTKRTPLSQGGAPGQAYGGHYHSVSVVRWYPVDTGLFISGGMDGVVKLWDTNALDVVLEFNFQEKVFAAAMSGASGQHHLIAVGNDSTQVRLCDIRSGAFSHALTGHSEAVWACAWSPISEFLLATGSADQTARLWDIRRSGASSCLISLDQHRDE-------------EEGDEGHYSFVSRATSGKXXXXXXXDGGG--------VAARQRGYMKHYKLAPQASRVSKFARAHSGPVNSMCFTPNGLHLLTAGTDNRLRLWEVETGRNTMMNYLQTKNRRRRPFGMAVAQPAGRRSETVFFPNDKSGDVLAFPLHSVDGQPSAQLRAHFDPVQCCAYRPRTQELVSGGADGLILLWS 1411
LW+D+ R G L P+SF+ RLR R L LS E SPHRG I L VD E RYL++ +D + AVFD+ ASE + G++A+ V ++ QQ GH ++VS WYP+DTGLFI+G D + +WDTN VV+ F KV+ AMS + H LIA G + QVRLCDI SGAF+H L+GH + V AC WS SE++L TG D R WDIRR+G C LDQ + + E+ + S + + G G ++++ +G + + P A AH G V S+ T +G++LL+AG+D+RLRLW++++G NT++N+ + + + +AVAQ S VF P S V AF L S G S RAH+D V CC + + QEL +GG D IL+WS
Sbjct: 2 LWKDITSREEGKLRPNSFSRRLRSRRISSLHLSNFKEFVSPHRGAINSLQVDLTEGRYLLSAASDASAAVFDVQVASEYEVG------GSVAKHKSLLVIDKQHQQ-------------------------------GHKYAVSSATWYPIDTGLFITGSFDHHINVWDTNTTQVVMNFKMPGKVYKTAMSPIATSHMLIASGTEDVQVRLCDIASGAFAHTLSGHRDGVMACEWSTSSEWVLMTGGCDGAIRYWDIRRAG---CFRVLDQAKSQLGRRQPLLERSVAEKAATSKPTGPSSSAKNRAELKKLSSGNGTKLSSMSRMSSQLKGGLAKQRRHPGMMSSQDHATAHYGAVTSLKTTEDGMYLLSAGSDSRLRLWDIDSGCNTLVNFETVRLQNSKGIQLAVAQD----SSLVFVPCMTS--VKAFDLWS--GNTSLTFRAHYDSVNCCWFSAQDQELYTGGNDRQILVWS 430
BLAST of mRNA_H-paniculata_contig229.6120.1 vs. uniprot
Match: A0A2K1XNW7_POPTR (Uncharacterized protein n=14 Tax=Saliceae TaxID=238069 RepID=A0A2K1XNW7_POPTR) HSP 1 Score: 263 bits (671), Expect = 1.530e-76 Identity = 165/478 (34.52%), Postives = 247/478 (51.67%), Query Frame = 2
Query: 44 LWRDLERRRCGILSPSSFADRLRPARARRLELSVDLEIKSPHRGTITWLDVDRAEERYLITGGADCTIAVFDLDGASEKQESPNSPSTGAIARRNINTVSARRKQQANKRRPRELRRIGHTKRTPLSQGGAPGQAYGGHYHSVSVVRWYPVDTGLFISGGMDGVVKLWDTNALDVVLEFNFQEKVFAAAMSGASGQHHLIAVGNDSTQVRLCDIRSGAFSHALTGHSEAVWACAWSPISEFLLATGSADQTARLWDIRRSGASSCLISLDQHRDE--EEGDEGHYSFVSRATS-----------GKXXXXXXXDGGGVAARQ--------RGYMKHYKLAPQASRVSKFARAHSGPVNSMCFTPNGLHLLTAGTDNRLRLWEVETGRNTMMNYLQTKNRRRRPFGMAVAQPAGRRSETVFFPNDKSGDVLAFPLHSVDGQPSAQLRAHFDPVQCCAYRPRTQELVSGGADGLILLWSP 1414
+WR++ R G P+SF +R+ +R L+LS ++ SPHRG+I L VD E RYL++G +D + +VFD+ A++ + GA+ ++ + ++ ++ Q GH ++S WYP+DTGLF++G D +K+WDTN+ +V+ F KV+ AMS + H LIA G + QVRLCDI SGAF+H L+GH + V WS SE++L TG D R WDIRR+G C + LDQ + + S VS+ ++ GK GGG + +GY+K +L P A AH G V + T +G++LL+AG+D+R+RLW+VE+GRNT++N+ + + +P +A AQ S VF P S V AF + S G+ R H++ V CC + + QEL +GG D IL+WSP
Sbjct: 1 MWREIRDREAGKTRPNSFKNRVSSSRISNLQLSNYKDVVSPHRGSINSLQVDLTEGRYLLSGASDASASVFDIQHATDFEGGGE----GALIAKHKSLITIDKQHQ------------------------------NGHKFAISSAIWYPIDTGLFVTGSYDHYIKVWDTNSTQMVINFKLPGKVYRTAMSPLATSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAG---CFLVLDQSQSQLGRRPPVLARSAVSKVSTSKALSKGQNLLGKPRMPQKKSGGGNGIKHSPLGQVPAKGYLKQ-RLHPGMLSSQDRATAHYGAVTGLKITEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETARLQTSKPIQLATAQD----SNLVFVPCMTS--VKAFDVWS--GKTYVTFRGHYEHVNCCWFSSQDQELYTGGNDRQILVWSP 432
BLAST of mRNA_H-paniculata_contig229.6120.1 vs. uniprot
Match: M1ATT5_SOLTU (WD-repeat protein n=9 Tax=Solanaceae TaxID=4070 RepID=M1ATT5_SOLTU) HSP 1 Score: 258 bits (660), Expect = 6.240e-75 Identity = 167/481 (34.72%), Postives = 246/481 (51.14%), Query Frame = 2
Query: 44 LWRDLERRRCGILSPSSFADRLRPARARRLELSVDLEIKSPHRGTITWLDVDRAEERYLITGGADCTIAVFDLDGASEKQESPNSPSTGAIAR-RNINTVSARRKQQANKRRPRELRRIGHTKRTPLSQGGAPGQAYGGHYHSVSVVRWYPVDTGLFISGGMDGVVKLWDTNALDVVLEFNFQEKVFAAAMSGASGQHHLIAVGNDSTQVRLCDIRSGAFSHALTGHSEAVWACAWSPISEFLLATGSADQTARLWDIRRSGASSCLISLDQHRDEEEGDEGHYSFVSRATSGKXXXXXXXDGG-----------------------GVAARQRGYMKHYKLAPQASRVSKFARAHSGPVNSMCFTPNGLHLLTAGTDNRLRLWEVETGRNTMMNYLQTKNRRRRPFGMAVAQPAGRRSETVFFPNDKSGDVLAFPLHSVDGQPSAQLRAHFDPVQCCAYRPRTQELVSGGADGLILLWSP 1414
+W+++ R G L P+ F++R++ AR ++LS +I SPHRG++ L VD E RYL++ +D ++AV+D+ A++ ES G IA+ ++I V + +Q GH +++S WYP+DTGLFI+G D V +WDTN VV+ F KV+ AMS + H LIA G + QVRLCDI SGAF+H L+GH + V + WS SE++L TG D R WDIRR+G C LDQ + S ++R+T+ K GG +A + RG K +L P A AH G VN + T +G++LL+AG+D+RLRLW++E+G NT++N+ ++ + + +A++ S VF P + AF L S G+ LR H++ V CC Y QEL +GG D IL+WSP
Sbjct: 1 MWKEIGDREFGKLRPNLFSNRIKSARIASIQLSNYKDIISPHRGSVNSLQVDLTEGRYLLSSASDASVAVYDVQRATDYDES------GLIAKHKHILLVDKQHEQ--------------------------------GHKYAISTANWYPIDTGLFITGSYDHYVNVWDTNTTQVVVNFKMPGKVYKTAMSPVATSHMLIAAGTEDVQVRLCDISSGAFAHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAG---CFRVLDQSHTQLGR---RPSLLTRSTANKGSTLKPSSGGPNSSAKGRPSQKKMGNGVSIKHSAIARQVRGSGKQ-RLHPGMLSSQDRATAHYGAVNGLKMTNDGMYLLSAGSDSRLRLWDIESGCNTLVNFETSRLQATKATQLAISHD----STLVFVPCMST--TKAFDLWS--GKTMMDLRGHYENVNCCLYNSLDQELFTGGNDRKILVWSP 428
BLAST of mRNA_H-paniculata_contig229.6120.1 vs. uniprot
Match: W1PXX5_AMBTC (Uncharacterized protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PXX5_AMBTC) HSP 1 Score: 258 bits (659), Expect = 8.720e-75 Identity = 172/495 (34.75%), Postives = 243/495 (49.09%), Query Frame = 2
Query: 44 LWRDLERRRCGILSPSSFADRLRPARARRLELSVDLEIKSPHRGTITWLDVDRAEERYLITGGADCTIAVFDLDGASEKQESPNSPSTGAIARRNINTVSARRKQQANKRRPRELRRIGHTKRTPLSQGGAPGQAYGGHYHSVSVVRWYPVDTGLFISGGMDGVVKLWDTNALDVVLEFNFQEKVFAAAMSGASGQHHLIAVGNDSTQVRLCDIRSGAFSHALTGHSEAVWACAWSPISEFLLATGSADQTARLWDIRRSGASSCLISLDQHRDE-----------EEGDEGHYSFVSRATSGKXXXXXXXDGGGVAARQ----RGYMKHYKLAPQASRVSKF---ARAHSGPVNSMCFTPNGLHLLTAGTDNRLRLWEVETGRNTMMNYLQTKNRRRRPFGMAVAQPAGRRSETVFFPNDKSGDVLAFPLHSVDGQPSAQLRAHFDPVQCCAYRPRTQELVSGGADGLILLWSPGAPSFASRASYLPGPANGLD 1474
+W+ ++ R G + P+SFA ++ ARA L LS E + H+G + VD E+RYL++G +D +IAV+D+ A++ G +A+ V KR S H +SVS V WYPVDTGLF++G +D VK+WDTN + V + F KV+ AMS S H LIA ++ QVRLCDI SGAFSH L+GH + VWA WS +E++L TG D R WDIRR+G C LDQ + + +G S S + S K G A+Q +G+ K L Q + A AH G V + T +G++LL+AGTD+RLRLW++E+GRNT++NY + + +P +AV +E VF P G A G+ R H++ V CC + + QEL +G D IL+WSP + + GP LD
Sbjct: 1 MWKVVDDRELGKIRPASFASHIQSARASSLHLSNRKEFVTAHKGAVNSFQVDLTEKRYLLSGASDGSIAVYDVQHATDYNGG------GLVAKHTSLFVV--------------------DKRQDFS-----------HKYSVSSVAWYPVDTGLFMTGSLDHYVKVWDTNTVQVEMNFKMPGKVYGIAMSSVSTSHMLIAAVSEDVQVRLCDISSGAFSHTLSGHRDGVWAVQWSTSNEWVLVTGGCDGAIRFWDIRRAG---CFRVLDQFQTQFGRRPPLLKSSTKGSVPESSVASTSASAKVKVPQKKAPCGGGAKQSSINKGWTKGSVLQRQHPGMLSSRNRASAHYGAVTGLKVTEDGMYLLSAGTDSRLRLWDIESGRNTLVNYEAMRLQTNKPIQLAVTPD----TELVFVP----GLTAARAYDIWSGRTILTFRGHYECVNCCWFNSQDQELYTGSNDRQILVWSPDSMVEEEVENNEKGPKRSLD 447
BLAST of mRNA_H-paniculata_contig229.6120.1 vs. uniprot
Match: A0A6P8EH22_PUNGR (WD repeat-containing protein ATCSA-1-like n=3 Tax=Punica granatum TaxID=22663 RepID=A0A6P8EH22_PUNGR) HSP 1 Score: 257 bits (657), Expect = 1.440e-74 Identity = 166/476 (34.87%), Postives = 237/476 (49.79%), Query Frame = 2
Query: 44 LWRDLERRRCGILSPSSFADRLRPARARRLELSVDLEIKSPHRGTITWLDVDRAEERYLITGGADCTIAVFDLDGASEKQESPNSPSTGAIARRNINTVSARRKQQANKRRPRELRRIGHTKRTPLSQGGAPGQAYGGHYHSVSVVRWYPVDTGLFISGGMDGVVKLWDTNALDVVLEFNFQEKVFAAAMSGASGQHHLIAVGNDSTQVRLCDIRSGAFSHALTGHSEAVWACAWSPISEFLLATGSADQTARLWDIRRSGASSCLISLDQHRDE------------EEGDEGHYSFVSRATSGKXXXXXXX--DGGGVAARQRGYM-----KHYKLAPQASRVSKFARAHSGPVNSMCFTPNGLHLLTAGTDNRLRLWEVETGRNTMMNYLQTKNRRRRPFGMAVAQPAGRRSETVFFPNDKSGDVLAFPLHSVDGQPSAQLRAHFDPVQCCAYRPRTQELVSGGADGLILLWSP 1414
+W+++E R G + P FA+RL+ R L+LS +I SPHRG++ L +D E RYL++G +D + AVFD+ + + G IA+ V ++ +Q GH ++VS WYP+DTGLFI+G D +K+WDTN+ VV+ F KV+ AMS + H LIA G + QVRLCDI SGAF+H L+GH + V WS SE++L TG D R WDIRR+G C LDQ + + S ++TS K +G G G + +L P A AH G V + T +G++LL+AG+D+RLRLW+VE+G NT++N+ + + + +AV+Q S+ VF P + V AF S G+ S R HF+ V CC + QEL +GG D IL+WSP
Sbjct: 1 MWKEIESRESGKIRPHRFANRLKSRRVASLQLSNTKDIVSPHRGSVNSLQIDLTEGRYLLSGASDASTAVFDVLQPQDYEGG------GLIAKHKSILVVDKQHEQ-------------------------------GHKYAVSTAIWYPIDTGLFITGSYDHFIKVWDTNSTQVVMNFKMPGKVYTTAMSPLATSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTAQWSASSEWVLVTGGCDGAIRFWDIRRAG---CFRVLDQSHSQLGRRPPILCHATTKASTSKSSLGGQSTSAKTGTTLGKFPNGNGTKKSSLGRILGKTSSKQRLHPGMMSSRDRATAHYGAVTGLKVTEDGMYLLSAGSDSRLRLWDVESGWNTLVNFETVRLQTNKAIQLAVSQE----SDLVFVPCMTA--VKAFDFWS--GKTSMTFRGHFENVNCCWFSSHDQELYTGGNDRQILVWSP 428
BLAST of mRNA_H-paniculata_contig229.6120.1 vs. uniprot
Match: A0A2P6Q132_ROSCH (Putative transcription factor WD40-like family n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6Q132_ROSCH) HSP 1 Score: 256 bits (654), Expect = 4.040e-74 Identity = 167/477 (35.01%), Postives = 240/477 (50.31%), Query Frame = 2
Query: 44 LWRDLERRRCGILSPSSFADRLRPARARRLELSVDLEIKSPHRGTITWLDVDRAEERYLITGGADCTIAVFDLDGASEKQESPNSPSTGAIARRNINTVSARRKQQANKRRPRELRRIGHTKRTPLSQGGAPGQAYGGHYHSVSVVRWYPVDTGLFISGGMDGVVKLWDTNALDVVLEFNFQEKVFAAAMSGASGQHHLIAVGNDSTQVRLCDIRSGAFSHALTGHSEAVWACAWSPISEFLLATGSADQTARLWDIRRSGASSCLISLDQHRDE-------------EEGDEGHYSFVSRATSGKXXXXXXXDGGGVAARQ-------RGYMKHYKLAPQASRVSKFARAHSGPVNSMCFTPNGLHLLTAGTDNRLRLWEVETGRNTMMNYLQTKNRRRRPFGMAVAQPAGRRSETVFFPNDKSGDVLAFPLHSVDGQPSAQLRAHFDPVQCCAYRPRTQELVSGGADGLILLWSP 1414
+WR++ R G L PSSF++R++ R + L+LS EI SPHRG I L VD E RYL++G +D + AV+D+ ++ + GAI++ V KQ N GH ++VS WYPVDTGLF++G D + +WDTN VV+ F KV+ AMS + H LIA G + QVRLCDI SGAF+H L+GH + V WS SE++L TG D R WDIRR+G C + LDQ + + +G S+++ K G A+ +G MK +L P A AH G V + T +G++LL+AG+D+RLRLW+VE+G NT++N+ + + +P +A + S F P + V AF + S G+ + R H++ V CC + + QEL +GG D IL+WSP
Sbjct: 1 MWREIGDREAGKLRPSSFSNRVKSNRIQTLQLSNQKEIVSPHRGAINSLQVDLTEGRYLLSGASDASAAVYDIQRGTDYEGG------GAISKHKAIFVVD--KQHEN-----------------------------GHKYAVSSAVWYPVDTGLFVTGSYDHHINVWDTNTTQVVMNFKMPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAG---CFLVLDQSQSQLGRRPPVLQRSATNKGSTAKPLLASQSSFAKARAQQRKHTNGNGAKSSTSKIPVKGSMKQ-RLHPGMLSSQDRATAHYGAVTGLKVTDDGMYLLSAGSDSRLRLWDVESGCNTLVNFETVRLQTSKPIQLATSP----NSPLAFVPCMTA--VKAFDMWS--GRTALTFRGHYEHVNCCWFSLQDQELYTGGNDRQILVWSP 428 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig229.6120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig229.6120.1 >prot_H-paniculata_contig229.6120.1 ID=prot_H-paniculata_contig229.6120.1|Name=mRNA_H-paniculata_contig229.6120.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=559bp MALWRDLERRRCGILSPSSFADRLRPARARRLELSVDLEIKSPHRGTITWback to top mRNA from alignment at H-paniculata_contig229:11258..25667+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig229.6120.1 ID=mRNA_H-paniculata_contig229.6120.1|Name=mRNA_H-paniculata_contig229.6120.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14410bp|location=Sequence derived from alignment at H-paniculata_contig229:11258..25667+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig229:11258..25667+ >mRNA_H-paniculata_contig229.6120.1 ID=mRNA_H-paniculata_contig229.6120.1|Name=mRNA_H-paniculata_contig229.6120.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3354bp|location=Sequence derived from alignment at H-paniculata_contig229:11258..25667+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |