mRNA_H-paniculata_contig10934.605.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10934.605.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 6.160e-17 Identity = 39/70 (55.71%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 1 LPALKENMLWSEGEEIVAQQDGAISHTGTDTPRKFNELGRDGVWNISLVNQPPQSPDLNIDDLGFFASLK 210 LPA+KE M W + +V QQDGA HTG P N G W + LV QP QSPDLNI+DLG FASLK Sbjct: 280 LPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLK 349
BLAST of mRNA_H-paniculata_contig10934.605.1 vs. uniprot
Match: W4FE75_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FE75_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.600e-13 Identity = 35/74 (47.30%), Postives = 44/74 (59.46%), Query Frame = 1 Query: 1 LPALKENMLWSEGEE---IVAQQDGAISHTGTDTPRKFNELGRDGVWNISLVNQPPQSPDLNIDDLGFFASLKS 213 LPALK + W G E + QQD A H + P F DG W+I + NQPPQSPDLN+ DLGFF S+++ Sbjct: 19 LPALKSSWRWPSGVETGTVFLQQDNARPHIAPEDPA-FVSAASDGGWDIQMRNQPPQSPDLNVLDLGFFNSIQA 91
BLAST of mRNA_H-paniculata_contig10934.605.1 vs. uniprot
Match: W4H5M7_9STRA (PH domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5M7_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 2.690e-12 Identity = 35/74 (47.30%), Postives = 44/74 (59.46%), Query Frame = 1 Query: 1 LPALKENMLWSEGEE---IVAQQDGAISHTGTDTPRKFNELGRDGVWNISLVNQPPQSPDLNIDDLGFFASLKS 213 LPALK + W G E + QQD A H + P F DG W+I + NQPPQSPDLN+ DLGFF S+++ Sbjct: 164 LPALKSSWRWPSGVETATVFLQQDNARPHIAPEDPA-FVSAASDGGWDIQMRNQPPQSPDLNVLDLGFFNSIQA 236
BLAST of mRNA_H-paniculata_contig10934.605.1 vs. uniprot
Match: A0A1Z5JF95_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JF95_FISSO) HSP 1 Score: 67.4 bits (163), Expect = 1.750e-11 Identity = 36/71 (50.70%), Postives = 42/71 (59.15%), Query Frame = 1 Query: 1 LPALKENMLWSEGEEIVAQQDGAISHTGTDTPRKFNELGRDGVWNISLVNQPPQSPDLNIDDLGFFASLKS 213 LPA+KE ML SE I+ QQD A H D P E DG + IS QPP SPDLN+ DLGF S++S Sbjct: 115 LPAIKEKMLCSERHRIIIQQDNAKPHCDVDDPILI-EAAEDGNFGISFRCQPPNSPDLNVLDLGFLNSIQS 184
BLAST of mRNA_H-paniculata_contig10934.605.1 vs. uniprot
Match: A0A6G0WM27_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WM27_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 5.900e-11 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 1 Query: 1 LPALKENMLWSEGEEIVAQQDGAISHTGTDTPRKFNELGRDGVWNISLVNQPPQSPDLNIDDLGFFASLKS 213 LPA+K M + + +I QQD A H+ + R FN++G WN++L NQP SPD N+ DLGFF S++S Sbjct: 284 LPAIKRKMSFMKNSKIFIQQDNAGPHSKSVNHR-FNQVGSYDGWNVALKNQPANSPDFNVLDLGFFNSIQS 353
BLAST of mRNA_H-paniculata_contig10934.605.1 vs. uniprot
Match: A0A484LDZ9_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LDZ9_9ASTE) HSP 1 Score: 62.4 bits (150), Expect = 7.170e-11 Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1 Query: 1 LPALKENMLWSEGEEIVAQQDGAISHTGTDTPRKFNELGRDGVWNISLVNQPPQSPDLNIDDLGFFASLKS 213 LPA+KE + + + I+ QQD A H + P DG ++I L QPP SPDLNI DLGFFAS++S Sbjct: 6 LPAIKEKVPEAITKHIIIQQDNAKPHIDVNDPEFVQAANADG-YSIELTCQPPNSPDLNILDLGFFASIQS 75
BLAST of mRNA_H-paniculata_contig10934.605.1 vs. uniprot
Match: A0A484MFG5_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484MFG5_9ASTE) HSP 1 Score: 64.7 bits (156), Expect = 1.620e-10 Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 1 Query: 1 LPALKENMLWSEGEEIVAQQDGAISHTGTDTPRKFNELGRDGVWNISLVNQPPQSPDLNIDDLGFFASLKS 213 +PA K + + ++ QQD A H D P + +DG WNIS+ QPP SPDLN+ DLGFFAS+ S Sbjct: 276 IPAFKAKWPKTRAKIVIIQQDNAKPHVHPDDPDRVLSCQKDG-WNISIKCQPPNSPDLNVLDLGFFASIDS 345
BLAST of mRNA_H-paniculata_contig10934.605.1 vs. uniprot
Match: A0A024TPN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TPN5_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.980e-10 Identity = 33/72 (45.83%), Postives = 42/72 (58.33%), Query Frame = 1 Query: 7 ALKENMLWS---EGEEIVAQQDGAISHTGTDTPRKFNELGRDGVWNISLVNQPPQSPDLNIDDLGFFASLKS 213 A+K W +G +IV QQD A H G D +F G +G W I + NQP QSPDLN+ DLGFF ++S Sbjct: 71 AIKSKWTWPLGVDGGDIVIQQDNARPHIGLDDA-EFVTAGEEGGWTIRIQNQPAQSPDLNVLDLGFFNLIQS 141
BLAST of mRNA_H-paniculata_contig10934.605.1 vs. uniprot
Match: A0A024TAS5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TAS5_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.450e-10 Identity = 33/74 (44.59%), Postives = 42/74 (56.76%), Query Frame = 1 Query: 1 LPALKENMLWS---EGEEIVAQQDGAISHTGTDTPRKFNELGRDGVWNISLVNQPPQSPDLNIDDLGFFASLKS 213 +PA+K W +G IV QQD A H D +F DG W I + NQP QSPD+N+ DLGFF S++S Sbjct: 91 VPAIKSKWKWPVGVDGGAIVLQQDNARPHIAPDDA-EFVTASEDGGWTIRIENQPAQSPDMNVLDLGFFNSIQS 163
BLAST of mRNA_H-paniculata_contig10934.605.1 vs. uniprot
Match: UPI001493C82E (uncharacterized protein LOC117844311 n=2 Tax=Setaria viridis TaxID=4556 RepID=UPI001493C82E) HSP 1 Score: 63.9 bits (154), Expect = 3.170e-10 Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 1 LPALKENMLWSE-GEEIVAQQDGAISHTGTDTPRKFNELGRDGVWNISLVNQPPQSPDLNIDDLGFFASLKS 213 LPA+KE E G I QQD A +H D P F + ++ W+I L QPP SPDLN+ DLGFFA+L++ Sbjct: 389 LPAVKEKWPAEERGRPIFIQQDNAKTHIAVDDP-DFCRVAKEDGWDIRLTCQPPNSPDLNVLDLGFFAALQA 459 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10934.605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10934.605.1 >prot_H-paniculata_contig10934.605.1 ID=prot_H-paniculata_contig10934.605.1|Name=mRNA_H-paniculata_contig10934.605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=64bp MLWSEGEEIVAQQDGAISHTGTDTPRKFNELGRDGVWNISLVNQPPQSPDback to top mRNA from alignment at H-paniculata_contig10934:6801..7013+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10934.605.1 ID=mRNA_H-paniculata_contig10934.605.1|Name=mRNA_H-paniculata_contig10934.605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=213bp|location=Sequence derived from alignment at H-paniculata_contig10934:6801..7013+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10934:6801..7013+ >mRNA_H-paniculata_contig10934.605.1 ID=mRNA_H-paniculata_contig10934.605.1|Name=mRNA_H-paniculata_contig10934.605.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=384bp|location=Sequence derived from alignment at H-paniculata_contig10934:6801..7013+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |