prot_H-paniculata_contig22567.6009.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig22567.6009.1
Unique Nameprot_H-paniculata_contig22567.6009.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length74
Homology
[Close]
BLAST of mRNA_H-paniculata_contig22567.6009.1 vs. uniprot
Match: A0A6H5LAY0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAY0_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 4.950e-26
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 0 
Query:    9 SYKVLDGGRGYEAGKPPGVKIESPPFLSDVARATATLKRSGSMFRVVLRAVGKGYDKAPDVLISPP 74
            SYKV +GGRGYEAG PP VKIE+PP+L+D ARATATL+RSGS+FRV LR+ GKGY  AP V ISPP
Sbjct:  254 SYKVTNGGRGYEAGHPPAVKIEAPPYLTDTARATATLRRSGSVFRVALRSPGKGYQTAPTVTISPP 319
[Close]
BLAST of mRNA_H-paniculata_contig22567.6009.1 vs. uniprot
Match: D7G8I8_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8I8_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 4.690e-25
Identity = 49/66 (74.24%), Postives = 56/66 (84.85%), Query Frame = 0 
Query:    9 SYKVLDGGRGYEAGKPPGVKIESPPFLSDVARATATLKRSGSMFRVVLRAVGKGYDKAPDVLISPP 74
            SYKV +GGRGYEAG PP VKIE+PP+L+D ARATATL+RSGS+FRV LR+ GKGY  AP V ISPP
Sbjct:  241 SYKVTNGGRGYEAGHPPAVKIEAPPYLTDTARATATLRRSGSVFRVALRSPGKGYQTAPTVTISPP 306
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22567.6009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LAY0_9PHAE4.950e-2674.24EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7G8I8_ECTSI4.690e-2574.24N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22567contigH-paniculata_contig22567:3393..3614 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22567.6009.1mRNA_H-paniculata_contig22567.6009.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig22567 3393..3614 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig22567.6009.1 ID=prot_H-paniculata_contig22567.6009.1|Name=mRNA_H-paniculata_contig22567.6009.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp
MLVCPTRNSYKVLDGGRGYEAGKPPGVKIESPPFLSDVARATATLKRSGS
MFRVVLRAVGKGYDKAPDVLISPP
back to top