prot_H-paniculata_contig2256.6007.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2256.6007.1
Unique Nameprot_H-paniculata_contig2256.6007.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length258
Homology
BLAST of mRNA_H-paniculata_contig2256.6007.1 vs. uniprot
Match: D7FNZ8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNZ8_ECTSI)

HSP 1 Score: 198 bits (504), Expect = 5.980e-60
Identity = 99/154 (64.29%), Postives = 126/154 (81.82%), Query Frame = 0
Query:  100 LAQAASALDPQRDKNTALPPPPALLLPVQRIRIAVAKLEDLLSEPSKWEEALSLLQSPPLADAEFRTTLDRYSDSNWEKHILGDLYRNQSVESIKALKEIMVFALEQQGKGVEISQDDIQDVGEAGRALVDSLNDFVSLAPPTDVKMIEKLVSD 253
            LA  ASALDPQRD+ TA+PPP  LLLPV ++R A AK+ DLL EPS WEEA SLL+SPPL++ +F   LDRYSDSNWEKHILGDLYRNQ + SIKAL E+M FAL+QQ  GV++SQ+D+ DV ++GRAL  SL+DF++LAPP D+++++ LV+D
Sbjct:   79 LAAPASALDPQRDRRTAVPPPRPLLLPVVKLRAATAKVLDLLEEPSGWEEARSLLRSPPLSNPDFAKILDRYSDSNWEKHILGDLYRNQGLASIKALDEVMSFALQQQEDGVKVSQEDVDDVRDSGRALAASLDDFLALAPPEDLRLVKDLVAD 232          
BLAST of mRNA_H-paniculata_contig2256.6007.1 vs. uniprot
Match: A0A836CFE8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFE8_9STRA)

HSP 1 Score: 118 bits (295), Expect = 7.700e-29
Identity = 66/177 (37.29%), Postives = 94/177 (53.11%), Query Frame = 0
Query:  105 SALDPQRDKNTALPPPPALLLPVQRIRIAVAKLEDLLSEPSKWEEALSLLQSPPLADAEFRTTLDRYSDSNWEKHILGDLYRNQSVESIKALKEIMVFALEQQGK------------------------------GVEISQDDIQDVGEAGRALVDSLNDFVSLAPPTDVKMIEKLV 251
            +ALD QRD + A PPPPA LLP+ ++++ V  ++ LL +P+ WE A   L    L+ +E+R   D YS  NW  HIL DLYRNQ +E + AL +++ + LEQQ K                                 I  +DI D+   G  L+ S++ F+SLAPP DV M+E+ V
Sbjct:   33 AALDSQRDASLARPPPPARLLPIMKVKLRVEGIQALLGDPAGWEAAREKLMDKALSKSEYRRVFDEYSTDNWGSHILADLYRNQGLEQLDALSDLLRYLLEQQAKLSADTASXXXXXXXXXXXXXXXXXXXXXXXXXXILPEDIADLRACGDGLMASIDAFLSLAPPADVAMVERAV 209          
BLAST of mRNA_H-paniculata_contig2256.6007.1 vs. uniprot
Match: D8LMV5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMV5_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 5.150e-26
Identity = 52/133 (39.10%), Postives = 91/133 (68.42%), Query Frame = 0
Query:  123 LLLPVQRIRIAVAKLEDLLSEPSKWEEALSLLQSPPLADAEFRTTLDRYSDSNWEKHILGDLYRNQSVESIKALKEIMVFALEQQGKGVEISQDDIQDVGEAGRALVDSLNDFVSLAPPTDVKMIEKLVSDSS 255
            LL+P  R ++AV  +  L+ +P KW EA   L+SPPLA A+F+     YSD++ E+H+  DLYR Q+ +++KA+ E++ +   ++ KG +I ++D++D+ EAGR+++  ++DF++LAP  DV M+ K  +D +
Sbjct:  128 LLVPALRAKLAVQSVLKLMKDPEKWGEAREALKSPPLAPADFKECFRTYSDADPEQHLAFDLYRIQAQDALKAVSELLAYLASEKNKGSKIDREDVEDLEEAGRSVLQGIDDFLALAPREDVLMVAKNTADQA 260          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2256.6007.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FNZ8_ECTSI5.980e-6064.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CFE8_9STRA7.700e-2937.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LMV5_ECTSI5.150e-2639.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2256contigH-paniculata_contig2256:12188..15600 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2256.6007.1mRNA_H-paniculata_contig2256.6007.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2256 11802..16317 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2256.6007.1 ID=prot_H-paniculata_contig2256.6007.1|Name=mRNA_H-paniculata_contig2256.6007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=258bp
MVLAWVIPAGFYNYHHSWEGRHSELHTIRKARAFRILPQPKSLQYERVRA
LCAPRWGAPHGDLSDNTAFEDTLCGRTLPREMFLRHAANALAGVMTIFAL
AQAASALDPQRDKNTALPPPPALLLPVQRIRIAVAKLEDLLSEPSKWEEA
LSLLQSPPLADAEFRTTLDRYSDSNWEKHILGDLYRNQSVESIKALKEIM
VFALEQQGKGVEISQDDIQDVGEAGRALVDSLNDFVSLAPPTDVKMIEKL
VSDSSPI*
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