mRNA_H-paniculata_contig2242.5970.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2242.5970.1 vs. uniprot
Match: D7G846_ECTSI (DNA polymerase zeta catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G846_ECTSI) HSP 1 Score: 958 bits (2477), Expect = 4.440e-298 Identity = 871/2150 (40.51%), Postives = 1070/2150 (49.77%), Query Frame = 2
Query: 212 MAAQDSPLISVRVVNVDWYLSEESKLPVVRIFGCTPAGQRACLHLHGALPYFMIRPMEDDNVGVTAQFEDPDSLTALLPELESALESAMAVSAGRPGGAPPSAAPNNERGKASIASSSRRWAQ-QQRVLAKLEVVRGVPFYGYHGEEALFIKVYVNNPSLTGKVASVLQAGHVISTRFQPYESHVPYLLQVFIDYNISGMSYVHLKNALFLLPLPESSSIPASQL---PDIDKGADSSSRACPGFFVASTVSDSLVAYP---------PRGRPAAARDAYRKPDRREYSAYTSGSEQEPM----DEAAQDHLAGISMSQLFSQPSFPAHTSHARQCAHASSYGVGSLPTPAVPVAPATTTPLK-----------RPPTNWWERQTTTELEITGTVDDVINPGLLMAEKVEAGE-KAVAVASLRELWDEERARSRAEGGGSQLSAPPGLELADSQDAWEPPDCLLTQDMQGAVDDLARSVVRKNPFATVATTAGQSLSQNRSSQASLIERRGNRLELSVSRHVDVTPSREGVLSQAS-------MGSVASVSESPASYLIASYAPDPDG--GSDSHEGLLDMLAALRGSQSQSHKGEEGVLTQNSPPKTRHSTQLSNDVLSQDPVFTPADFADQAEAIAATQEKQFREEEELGVQMALAADLEIQCDSDGSENYQATQPLNSTRKATVEGLIPGTAPYTAVATP-PATASGRMPMTDPLPPWS--QRAASYXXXXXXSRSASPRLRTAATLP-WSQQRLEHRGSGATPVVDRQFPPERMALDEEDGFGADDYDKEEEGXXXXXXXXXGGGDGDDDFLSQLSARTLSDLEESVRARLEMERSIPTNERGKSSQEDTLFRAQLAGSD---SSELVGIIASQVEFEQSERYQMRGNNTERFNAMGVIEEGGDEDE-----------QKEQHQENGEGVISDHEWTRGPIQLQYDDDVGPQIATAENNPTDGTVMNDSEREGNSD---DGDEKSAADESPLRLRGGVGLPRTKSIKS----AQTAPQGDLSERRTTSSISAAAVGEYDGTGEADDSPAQSMNKRPPPHPSRGGMAQNSGAQAAKRHTPLLRAPGGLRRSTSITG--GSFKPPR----SAGAYRKIREAASES------------GPELTASSADNSQQPP--MRDEPKRGLSEMFEGAEPVE---EKSDKKDGSDLEERSQLVVPGWGSQGNHPVEYSEGHLSFVSTSQLRTSPSLIR---RRSGDGLAGNEPESAPGLGNKKQKVLGEEGRSHSSGSMDIAGHGDTASPADDRDGAATGSTTETPQKSAVGQVAKPSLSKAPSFEVDYEFEFGGTQQAIKPTATFVATAYTAGAAAEGQVKAPSYFQPNEKKHGCDEEDKHKESKTDEPIEDVQSRWAGADARLRLAQARGTPPPSFRKQRGDASSARRGRESAKFLSLEPGAEDDVSGVPNVRRCHPSSLASSPVNSCDTAAKLRQASKGSPSTVENRLGTMKGQFDTVETPSSMSCSSALVIEATTTITSKPSPSTISEISLPTGVNEKRRRPSPRLRSISIAKVPVKGKTTPAGIANAPAVHQSINSPSPGRPQHGSAGDIGQRYGDGARSKSVAPRKGLPVVGSASVRQENGRNRSVASADLSNVRAATLPTENPAKAKFVRQNASPKTPSGTEQRQRFQRAGDNNLHIDDVNVAASPVTLGAA------ASSPAASLAS--PTSFSP----AGLDWGHSPALPLSGHSDHSDMIPLGQRSPALPITTSPVSRSAADVRK-----GRGLEGGKAVLSGQPSSRKPRMP----LTPGRGVTGSPDGRERVFSGFTPPSPRPRAVSGR-SEVAVLKPREIAPDPKACAATLARLGVPQVVHAEAYYSRKDDVPERPHVFAGKVFRILHKDDLQAFDTLPSRELLHACNQHHAESTSLTPAEATQGDRTTPSSCYTGDSPTPKTNLPQSQDAGDSRPSPSATR--SEERQEGGSA------------GGYPEWVREAGE--EGGGIPGTESIVVLSSDSGRQQEVPMAISRGIDLLKREAATNRG-SRRAHSQAGQRAVRVVELVPTISPPSPKVVAAWGRANPCSARQKRVVDALDMPVLRSTRNALGVLAGGGEADLTDDKDDSAEMTMVADANTGKLVPL 6277
MAA DSPLISVRVVNVDWYLSEESKLPVVRIFG TPAGQR+CLHLHGALPYFM+RPME+++ + AQFEDP SL ALLP+LE ALESAMA S+G PG PS +P G+ R W + +Q VLA+LEVVRGVPFYGYHGEE LF+KVYVNNP+LTGKVASVLQAGHV+STRFQP+ESHVP+LLQVFIDYNISGMSYVHL+NALFL PLPE SS+ +S P+ D+ G F ++TV +SLVA P P G P + D +A G E + DEAAQD LAGISMSQLFSQPS + +R PA P A AT++P K RP WWERQTTTELE+ G +DDVINP LL A + EA + K +AVASLRELWDEE+ RSR GGGSQLSAPPGLELADSQD WEPPD LLTQ ++ + LAR+V+R+ AT A +G + S S GN L+ S V++TPSR+G+LSQAS VA VS SPA+YL P G D +GLLDM+AALRGSQ +G + +SPP + T+ + LSQ P FTP ADQAEA+AATQ+KQ +E+ELG ++ALAA E DSDGS++Y L R A V I + A P P A + P+ PPWS QRAASY A P A+TLP WSQ+ E +G + R+A + G G D + E+G DG + LSQLSAR+L D+++SV+A ++ ER P + R S D L ++ G++ SELV II SQVE EQ + Q + ++M I E + E + G+ DH WTRGP QL+YDD+V E D D D D K PLRLRGGVGLPRTK + A TAP+ S + S++ + D +DD PA S KRP P SGA KR PL R P G+RRS+S+ G G FKPPR +A + EA + S + + DN + P + EP++ G + + +++ S+ +ERSQ+VVPGWGSQG+HPVEYSE LSFV +QLR SP R R+ + ++ E A KKQKVLG+EG + G+ A A PA+ G G E + A P + + GT PT A GQ + P+ D V RW GADARLRLAQ RGTP PS + R D S+ GR + G+E + C A L A+HQ P S D Q P VG+ N + SA S R PT++P P TP +R G N HI +V +P + +PAA++AS PT A G SP PLS SD SD+ PLGQ SP LPIT + + +AA G++ SG S P LT G G SP RER F GFTPP+PR R V GR S VL+P E APDPK CAA L+RLGVPQV+H E YYSRKDDVPERP FAG VFRI HKD+L+AFDTL SRE+LHA Q A + + T R+ SSC S TP+++LP DS P A S+ +GG A GG+ +GE EGGG + ++ + D+G+Q+ P+A+ RGID K AA G +RR Q R VELVP+ISPP K VAAWGRANP S R RVVD LD PVLRSTRNALGVLAGGGEADL D D S +M+MVAD NTG+LVP+
Sbjct: 1 MAALDSPLISVRVVNVDWYLSEESKLPVVRIFGSTPAGQRSCLHLHGALPYFMVRPMEEESSAICAQFEDPGSLNALLPQLEQALESAMASSSGGPGA--PSLSPAGGAGR-----GGRPWGRNRQPVLARLEVVRGVPFYGYHGEEKLFVKVYVNNPALTGKVASVLQAGHVLSTRFQPFESHVPFLLQVFIDYNISGMSYVHLRNALFLQPLPELSSVTSSSQEPSPNSIGLNDNDESPLTGIFTSATVPESLVANPVGQGDAWRSPAGVPGCEWAGGKTADGAARTATARGLEPVTLRGDTDEAAQDLLAGISMSQLFSQPSIAPKVAPSRPPKEG----------PA-PRATATSSPGKTRAGQGGATGDRPRPKWWERQTTTELEVVGIIDDVINPSLLAAGRAEAADGKPMAVASLRELWDEEKERSRVAGGGSQLSAPPGLELADSQDVWEPPDLLLTQHVRDEAEGLARNVLRR---ATPARDSGVFPKEESSEPRSQASASGNDLD-ERSGEVELTPSRDGLLSQASGTDEANTTAPVADVSCSPANYL-----PSLGGICDHDVDQGLLDMIAALRGSQQSQSQGVDRESL-SSPPAGQQYTRSPSGPLSQRPAFTPESSADQAEAVAATQKKQELDEQELGSRIALAAQSERHYDSDGSDDY-----LEPARAAAVNVSISSATGNPSAAIPVPGAAGMQTPVLADPPPWSSSQRAASYPPWS--QHRAGPEPVRASTLPFWSQRSTEVASAGISG---------RLAGRDRHGGGKMDGNHLEQGEEEMDEEDERAEDGVERMLSQLSARSLDDVKDSVQAEIDRERRAPIDPR--MSPYDPLLTSRAQGTEPRSQSELVDIICSQVEVEQDQNAQ--SSTVLADHSMDAIMEXXXXXXXXXXXXXXCAMRTEPPRNRGD---VDHRWTRGPTQLRYDDEVEGNQEGTERGRVDMEEXXXXXXXXXXDGVRDSDTKG-----PLRLRGGVGLPRTKPKPARPSRAATAPEPSSSSASLPGASSSSPRNDPDMR--SDDPPAGS--KRPAPA---------SGA-LPKRRAPL-RVPVGIRRSSSMPGVVGGFKPPRLLSTAAANLPTVDEAGNASRYGGGGGGSCGISGDDSMCGGDNGDKSPGFVHREPRKDNPAAAGGTDSADGDGSSDTQEEDSNKDERSQVVVPGWGSQGHHPVEYSENQLSFVPIAQLRVSPKSTRGMGARTDNDVSDTERVEAA---RKKQKVLGKEGYNRGDGTESAAARVSEA-PAEKHGGGDIG--VEPDSAKGKPRSASPXXXXENPTRKEKPPLYVGTSGEATPTPALGPPRSEATGGQPGQNTDNARASPDGSSGAGDS--------------GVDGRWRGADARLRLAQTRGTPSPSSHQARTDNSNG--GRRGRNENAAARGSE---------------------FSPCSPLAPL-------------------------------------------------------------------------------------------------ALHQE--------PGTSSENDADQ-----------------PHVGT---------NHARGSARSSTPREGRTPTQDP-----------PGTP--------LRRQGLANRHIAADSVLRAPEMAPRCDNPTGLSCTPAAAVASVFPTXXXXXXXLAMYTAGRSPTTPLSAPSDSSDVPPLGQPSPGLPITAARGADAAASDTPLSDAWSSGVQRTGCNNSGTEESPAPNPGEAFFLTSGSGSAASP-ARER-FPGFTPPTPRQRGVGGRESGTVVLRPPETAPDPKTCAAALSRLGVPQVLHTEPYYSRKDDVPERPREFAGNVFRIQHKDNLKAFDTLQSREILHAHQQAEAATATPTSPRHRHAGRSVASSCS---SYTPRSHLP------DSEPGNRAVGGGSDLGADGGLAMSPSPDHRVTGTGGF------SGESYEGGGGGSSGALSLAGGDAGQQE--PIAL-RGIDEWKEAAAMFGGPARRKSRHVSQGPGRTVELVPSISPPPYKAVAAWGRANPSSTRSARVVDDLDKPVLRSTRNALGVLAGGGEADLAGD-DGSGDMSMVADPNTGQLVPV 1865
BLAST of mRNA_H-paniculata_contig2242.5970.1 vs. uniprot
Match: A0A6H5L0N9_9PHAE (DNA polymerase zeta catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N9_9PHAE) HSP 1 Score: 791 bits (2044), Expect = 1.610e-238 Identity = 790/2128 (37.12%), Postives = 971/2128 (45.63%), Query Frame = 2
Query: 212 MAAQDSPLISVRVVNVDWYLSEESKLPVVRIFGCTPAGQRACLHLHGALPYFMIRPMEDDNVGVTAQFEDPDSLTALLPELESALESAMAVSAGRPGGAPPSAAPNNERGKASIASSSRRWAQ-QQRVLAKLEVVRGVPFYGYHGEEALFIK----------------------------------------------------------------VYVNNPSLTGKVASVLQAGHVISTRFQPYESHVPYLLQVFIDYNISGMSYVHLKNALFLLPLPESSSIPASQL---PDIDKGADSSSRACPGFFVASTVSDSLVAYP---------PRGRPAAARDAYRKPDRREYSAYTSGSEQEPM----DEAAQDHLAGISMSQLFSQPSFPAHTSHARQCAHASSYGVGSLPTPAVPVAPATTTPLK-----------RPPTNWWERQTTTELEITGTVDDVINPGLLMAEKVEAGE-KAVAVASLRELWDEERARSRAEGGGSQLSAPPGLELADSQDAWEPPDCLLTQDMQGAVDDLARSVVRKNPFATVATTAGQSLSQNRSSQASLIERRGNRLELSVSRHVDVTPSREGVLSQAS-------MGSVASVSESPASYLIASYAPDPDG--GSDSHEGLLDMLAALRGSQSQSHKGEEGVLTQNSPPKTRHSTQLSNDVLSQDPVFTPADFADQAEAIAATQEKQFREEEELGVQMALAADLEIQCDSDGSENYQATQPLNSTRKATVEGLIPGTAPYTAVATP-PATASGRMPMTDPLPPWS--QRAASYXXXXXXSRSASPRLRTAATLP-WSQQRLEHRGSGATPVVDRQFPPERMALDEEDGFGADDYDKEEEGXXXXXXXXXGGGDGDDDFLSQLSARTLSDLEESVRARLEMERSIPTNERGKSSQEDTLFRAQLAGSD---SSELVGIIASQVEFEQSERYQMRGNNT-----------ERFNAMGVIEEGGDEDEQKEQHQENGEGVISDHEWTRGPIQLQYDDDV--GPQIATAENNPTDGTVMNDSEREGNSDDGDEKSAADESPLRLRGGVGLPRTKSIKS----AQTAPQGDLSERRTTSSISAAAVGEYDGTGEADDSPAQSMNKRPPPHPSRGGMAQNSGAQAAKRHTPLLRAPGGLRRSTSITG--GSFKPPR--SAGAYRKIREAASESG--------------PELTASSADNSQQPP--MRDEPKRGLSEMFEGAEPVEE--KSDKKD-GSDLEERSQLVVPGWGSQGNHPVEYSEGHLSFVSTSQLRTSPSLIR---RRSGDGLAGNEPESAPGLGNKKQKVLGEEGRSHSSGSMDIAGHGDTASPADDRDGAATGSTTETPQKSAVGQVAKPSLSKAPSFEVDYEFE--FGGTQQAIKPTATFVATAYTAGAAAEGQVKAPSYFQPNEKKHGCDEEDKHKESKTDEPIEDVQSRWAGADARLRLAQARGTPPPSFRKQRGDASSARRGRESAKFLSLEPGAEDDVSGVPNVRRCHPSSLASSPVNSCDTAAKLRQASKGSPSTVENRLGTMKGQFDTVETPSSMSCSSALVIEATTTITSKPSPSTISEISLPTGVNEKRRRPSPRLRSISIAKVPVKGKTTPAGIANAPAVHQSINSPSPGRPQHGSAGDIGQRYGDGARSKSVAPRK----GLPVVGSASVRQENGRNRSVASADLSNVRAATLPTENPAKAKFVRQNASPKTPSGTEQRQRFQRAGDNNLHIDDVNVAASPVTLGAAASSPAASLASPTSFSPAGLDWGHSPALPLSGHSDHSDMIPLGQRSPALPITTSPVSRSAADVRK-----GRGLEGGKAVLSGQPSSRKPRMPLTPGRGVTGSPDGRERVFSGFTPPSPRPRAVSGR-SEVAVLKPREIAPDPKACAATLARLGVPQVVHAEAYYSRKDDVPERPHVFAGKVFRILHKDDLQAFDTLPSRELLHACNQHHAESTSLTPAEATQGDRTTPSSCYTGDSPTPKTNLPQSQDA-------------GDSRPSPSATRSEERQEGGSAGGYPEWVREAGEEGGGIPGTESIVVLSSDSGRQQEVPMAISRGIDLLKREAAT-NRGSRRAHSQAGQRAVRVVELVPTISPP 6061
MAA D+PLISVRVVNVDWY SEESKLPVV IFG TPAGQR+CLHLHGALPYFM+RPME+++ + AQFEDP SL ALLP+LE ALESAMA S+G PG PS +P G+ R W + QQ VLA+LEVVRGVPFYGYHGEE LF+K VYVNNP+LTGKVASVLQAGHV+STRFQP+ESHVP+LLQVFIDYNISGMSYVHL+NALFL PLPE SS+ +S PD D+ G F ++TV +SLVA P P G P + R R D + G E + DEAAQD L GISMSQLFSQPS + +R PA P A AT++P K RP WWERQTTTELE+ G +DDVINP LL A + + K +AVASLRELWDEE+ RSR GGGSQLSAPPGLELADSQD WEPP+ LLTQ ++ + LAR+V+R+ AT +G + RS S GN + S V++TPSR+G LSQAS VA S SPA+YL P G D +GLLDM+AALRGSQ +G + +SPP + T+ + LSQ P FTP ADQAEA+AATQE +EEELG +MALAA E DSDGS++Y L R A V I + A P P A + P+ PPWS QRAASY R A P A+TLP WSQ+ E +G + R+ + G G D ++ EEG G DG + LSQLSAR+L D+++SV+ ++ ER IP + R S D L ++ GS+ SELV II SQVE EQ E Q N+T E + E+GG E + + N V DH WTRGP QL+YDD+V + K + + PLRLRGGVGL RTK + A TAP+ S + S++A D M PP + G A + KR PL R P G+RRS+S+ G G FKPPR S A + A +G DN + P + EP++ G + + SD +D ++ +ERSQ+VVPGWGSQG+HPVEYSE LSF +QLR SP R R+ + + E A KKQKVLG+EG + S G+ A A P + G G + SA G+ S P E + GT + PT A GQ + P D V RW GADAR+RLAQ RGTP PS + R D S+ R + L P A G S N D + +GT R + + P + +T I P Q + + +H +A R+ + APR+ GL A+V A+ PT P P SLA T+ G SP PLS SD+SD+ PL Q SP LPIT + + +AA G++ SG + LT G G SP FSGFTPP+PR R + GR S VL+P E APDPK CAA L+RLGVPQV A + DDVPERP FAG VFRI HKD+L+AFDTL SRELLHA Q A + + T R SSC S TP ++LP S+ G SPS G S Y EGGG G+ + + RQQE P+A+ RGID K AA +RR Q R VELVP ISPP
Sbjct: 1 MAALDAPLISVRVVNVDWYHSEESKLPVVLIFGSTPAGQRSCLHLHGALPYFMVRPMEEESSAICAQFEDPGSLNALLPQLEQALESAMASSSGGPGA--PSLSPAGGAGR-----GGRPWGRTQQPVLARLEVVRGVPFYGYHGEEKLFVKDDRVCTLVSYNMRNVESMQCNILKRLRNRAPSPRGVIALVLLPAGLVWRCMPSLNVRLTAFGLKVYVNNPALTGKVASVLQAGHVLSTRFQPFESHVPFLLQVFIDYNISGMSYVHLRNALFLQPLPELSSVTSSSRESSPDSTGLNDNGESPLTGIFTSATVPESLVANPVGQGDAWRSPAGVPGSERAGGRTADGAASTVTVRGLEPVTLRGDTDEAAQDLLEGISMSQLFSQPSIAPKVTRSRPPKEG----------PA-PRATATSSPGKIHADQEGATGDRPRPKWWERQTTTELEVVGIIDDVINPSLLAAGRAGGADGKPMAVASLRELWDEEKERSRVAGGGSQLSAPPGLELADSQDVWEPPELLLTQHVRDEAEGLARNVLRR---ATPCRDSGFFPKEERSEPRSQASASGNDFD-ERSGEVELTPSRDGSLSQASGTGEANAATPVADASCSPANYL-----PSLGGICDHDVDQGLLDMIAALRGSQQSQSQGVDRESL-SSPPAGQQYTRSPSGPLSQRPAFTPQSSADQAEAVAATQEL---DEEELGTRMALAAQSERHYDSDGSDDY-----LEPARAAAVIMSISSATGKPSAAVPVPGAAGMQTPVLADPPPWSSSQRAASYPPWS--QRGAGPEPVRASTLPFWSQRSTEVASAGISG---------RLTGRDWRGGGKMDENRLEEGEEEMDEEDEGAEDGVERMLSQLSARSLDDVKDSVQVEIDRERRIPIDPR--MSPHDPLLASRAQGSEPRSQSELVDIICSQVEVEQDENAQ---NSTFFADHSMDAILEEKDEXXXXEDGGGERTMRTEPPRNRADV--DHRWTRGPTQLRYDDEVEGNQEGRXXXXXXXXXXXXXXXXXXXXXXXXGVKDSGTKGPLRLRGGVGLARTKPKPTRPSRAATAPEPSTSSASLPGASSSSARNGPD------------MQSNDPP--AGGKRAAPASGALPKRRAPL-RVPVGIRRSSSMPGVVGGFKPPRLLSTAANLPTVDEAGSAGRXXXXXXXXXXXXXXXXXMCGGDNGDKSPGLVHREPRKDDPAAAGGTDSADGDGSSDTQDEDANKDERSQVVVPGWGSQGHHPVEYSESQLSFFPIAQLRVSPKSTRGMGARTDNDFSETEGGKAA---RKKQKVLGDEGYNRSGGTESAAARVSEA-PVEKHGGGDIGGEPD----SAKGKPRSASPPPPPENPTQKETPPLYVGTSRETTPTPALGPPRSEATGRKPGQNTDNARASPGGSSSAGDS--------------GVDGRWRGADARIRLAQTRGTPSPSSHQARTDNSNGGRRGSTKNCSPLAPLALHQEPGT-------------SSENDAD----------------QPHVGTNHA------------------------------------------------------RGSARSSTPRESRTQEQDIPGTPLHRQGLAN------RHMAADSA-------LRAPATAPRRDNSTGLSCSPPAAV-------------------ASVFPTPTP----------------------------------------------------PLPSLAVYTA--------GRSPTTPLSAPSDNSDVPPLAQPSPWLPITAARGAGAAASDTPLSDAWSSGVQRTGCNNSGPAPNPGEAFFLTSGSGSAASPV--RESFSGFTPPTPRQRGIGGRESGTVVLRPPETAPDPKTCAAALSRLGVPQV--GGAPNTEMDDVPERPREFAGNVFRIQHKDNLKAFDTLQSRELLHAHQQAEAATATPTSPRHRHAGRGVASSCS---SCTPLSHLPDSEPRNRAVGGGSGLGADGGLAMSPSPDHRVTGTGGLSGESY---------EGGG--GSSEPLSWTGGGPRQQE-PIAL-RGIDEWKEAAAMFGEAARRQSRHVNQGPGRTVELVPAISPP 1842
BLAST of mRNA_H-paniculata_contig2242.5970.1 vs. uniprot
Match: A0A024UBI3_9STRA (DNA polymerase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UBI3_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.130e-35 Identity = 90/234 (38.46%), Postives = 137/234 (58.55%), Query Frame = 2
Query: 206 IKMAAQDSPLISVRVVNVDWYLSEESK------------------LPVVRIFGCTPAGQRACLHLHGALPYFMIRPMEDDNVGVTAQFEDPDSLTALLPELESALESAMAVSAGRPGGAPPSAAPNNERGKASIASSSRRWAQQQRVLAKLEVVRGVPFYGYHGEEALFIKVYVNNPSLTGKVASVLQAGHVISTRFQPYESHVPYLLQVFIDYNISGMSYVHLKNALFLLPLP 853
+++A D ++ V VV+V++Y+++ +PVVRIFG TPAGQ+ C+H+HG PYF +R E+D+ FE D L ALLP++ +E+A+ + G AP +A ++ +S +AKL VV GVPFYGYH EALF+KV++ +P++ ++ V+++G V FQPYE+H+PYLLQVF DY+I GM+Y+ ++ F PLP
Sbjct: 1 MRVAVDDQEMMRVEVVDVNYYMAKPLPALAIPCLPQGPCYRRARVVPVVRIFGATPAGQKCCVHVHGIFPYFYMR-CENDHA-----FESVDELVALLPKIAQDIEAAVRTLSQANGKAPQAAT-------MAVHASKASHRPHTITIAKLAVVTGVPFYGYHSSEALFVKVFMYDPAMMSRIVQVVESGLVTQRTFQPYEAHIPYLLQVFADYHIEGMNYLIARDFKFRRPLP 221
BLAST of mRNA_H-paniculata_contig2242.5970.1 vs. uniprot
Match: A0A833RZ37_PHYIN (DNA polymerase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833RZ37_PHYIN) HSP 1 Score: 155 bits (391), Expect = 7.770e-34 Identity = 86/232 (37.07%), Postives = 128/232 (55.17%), Query Frame = 2
Query: 212 MAAQDSPLISVRVVNVDWYLSEE------------------SKLPVVRIFGCTPAGQRACLHLHGALPYFMIRPMEDDNVGVTAQFEDPDSLTALLPELESALESAMAVSAGRPGGAPPSAAPNNERGKASIASSSRRWAQQQRVLAKLEVVRGVPFYGYHGEEALFIKVYVNNPSLTGKVASVLQAGHVISTRFQPYESHVPYLLQVFIDYNISGMSYVHLKNALFLLPLP 853
M +D + V V VD+Y+S ++PV+RIFG TPAGQ+A +H+HG PYF R +D + FED + L LLP L +E+A A ++ + + +++ R+ R++AK+ +V+G PFYGYH LF+++++ NP + V +L++G V+ RFQPYE+H+P+LLQVF DYNI GM+YV L N F PLP
Sbjct: 1 MDDEDEEELRVEAVVVDYYMSSPLPADSVKKIPASPCYLRAREVPVIRIFGATPAGQKALVHVHGIFPYFYFRTEDDPD------FEDAERLRTLLPRLAKDIEAANAS--------------KQKQRQQNNGNATARF-NPSRIIAKMLIVQGTPFYGYHPRPKLFVQIFLYNPRVVASVVQLLESGAVVERRFQPYEAHIPFLLQVFADYNIEGMNYVALSNVKFRFPLP 211
BLAST of mRNA_H-paniculata_contig2242.5970.1 vs. uniprot
Match: W4FZR9_9STRA (DNA polymerase zeta catalytic subunit n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FZR9_9STRA) HSP 1 Score: 154 bits (389), Expect = 8.240e-34 Identity = 89/235 (37.87%), Postives = 134/235 (57.02%), Query Frame = 2
Query: 206 IKMAAQDSPLISVRVVNVDWYLSEE------------------SKLPVVRIFGCTPAGQRACLHLHGALPYFMIRPMEDDNVGVTAQFEDPDSLTALLPELESALESAMAVSAGRPGGAPPSAAPNNERGKASIASSSRRWAQQQRV-LAKLEVVRGVPFYGYHGEEALFIKVYVNNPSLTGKVASVLQAGHVISTRFQPYESHVPYLLQVFIDYNISGMSYVHLKNALFLLPLP 853
I + + P++ V VV+V++Y+ + +PVVRIFG TPAGQ+ C HLHG PYF +R D F+ D L +LP++ +ESA+ + AP + S+++ ++QQ + +AKL VV+GVPFYGYH E LFIKV++ +P++ ++ V+++G V FQPYE+H+PYLLQVF DY+I GM+Y++L + F PLP
Sbjct: 3 IDVDSNAQPIMRVEVVDVNYYMDKPLPKDAIPSLPQGPCYERARSVPVVRIFGATPAGQKCCAHLHGIFPYFYMRCENDPT------FDSIDELVTMLPKVAHDIESAVRTLSQANVKAP----------VGTTNSTAKPTSRQQNISVAKLAVVKGVPFYGYHASEVLFIKVFLYDPAMMSRIVQVVESGLVTQRTFQPYEAHIPYLLQVFADYHIEGMNYLNLCDFKFRSPLP 221
BLAST of mRNA_H-paniculata_contig2242.5970.1 vs. uniprot
Match: A0A6A5A6I7_9STRA (DNA_pol_B_exo1 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A6I7_9STRA) HSP 1 Score: 150 bits (379), Expect = 8.500e-34 Identity = 92/237 (38.82%), Postives = 139/237 (58.65%), Query Frame = 2
Query: 206 IKMAAQDSPLISVRVVNVDWYLSEE------------------SKLPVVRIFGCTPAGQRACLHLHGALPYFMIRPMEDDNVGVTAQFEDPDSLTALLPELESALESAMAVSAGRPGGAPPSAAPNNERGKASIASSSRRWAQQQRV-LAKLEVVRGVPFYGYHGEEALFIKVYVNNPSLTGKVASVLQAGHVISTRFQPYESHVPYLLQV--FIDYNISGMSYVHLKN-ALFLLPL 850
I + + P++ V VV+V++Y+ + +PVVRIFG TPAGQ+ C HLHG PYF +R D F+ D L A+LP++ +ESA+ + AP AA N S+++ ++QQ + +AKL VV+GVPFYGYH E LFIKV++ +P++ ++ V+++G V FQPYE+H+PYLLQV F DY+I GM+Y++L++ +F LP+
Sbjct: 3 IDVDSNAQPIMRVEVVDVNYYMDKPLPKDAIPSLLQGPCYERARSVPVVRIFGATPAGQKCCAHLHGIFPYFYMRCENDPT------FDSIDELVAILPKVAHDIESAVRTLSQANVKAP--AATTN--------STAKPTSRQQNISVAKLAVVKGVPFYGYHASEVLFIKVFLYDPAMMSRIVQVVESGLVTQRTFQPYEAHIPYLLQVPVFADYHIEGMNYLNLRDFKVFSLPI 223
BLAST of mRNA_H-paniculata_contig2242.5970.1 vs. uniprot
Match: K3WHC9_GLOUD (DNA polymerase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHC9_GLOUD) HSP 1 Score: 153 bits (386), Expect = 2.790e-33 Identity = 90/236 (38.14%), Postives = 130/236 (55.08%), Query Frame = 2
Query: 212 MAAQDSPL----ISVRVVNVDWYLSEE------------------SKLPVVRIFGCTPAGQRACLHLHGALPYFMIRPMEDDNVGVTAQFEDPDSLTALLPELESALESAMAVSAGRPGGAPPSAAPNNERGKASIASSSRRWAQQQRVLAKLEVVRGVPFYGYHGEEALFIKVYVNNPSLTGKVASVLQAGHVISTRFQPYESHVPYLLQVFIDYNISGMSYVHLKNALFLLPLP 853
MA +D+ + + VVNVD Y++ ++PVVRIFG TPAGQ+A LH+HG PYF R +E+D+V F++ D L LLP++ LE A N+ + A+ +R A + +++AKL +V+G PFYGYH LF+++++ NP L V +L++G + FQ YESHVP+LLQVF DYNI GM+ VH+ N F P+P
Sbjct: 1 MAVEDATAADEELCMEVVNVDHYMAAPLPPHAIPVLPSAPCYLMAREVPVVRIFGATPAGQKALLHIHGIFPYFYFR-VENDSV-----FDNADELRRLLPQIALELEKA------------------NDIKQQQNANGARNSANRTKIVAKLLIVQGTPFYGYHPSPRLFVQIFLYNPRLVSTVVQILESGCIAERPFQTYESHVPFLLQVFADYNIEGMNNVHMSNVKFRAPVP 212
BLAST of mRNA_H-paniculata_contig2242.5970.1 vs. uniprot
Match: W2QX79_PHYPN (DNA polymerase n=10 Tax=Phytophthora TaxID=4783 RepID=W2QX79_PHYPN) HSP 1 Score: 153 bits (386), Expect = 3.000e-33 Identity = 85/232 (36.64%), Postives = 128/232 (55.17%), Query Frame = 2
Query: 212 MAAQDSPLISVRVVNVDWYLSEE------------------SKLPVVRIFGCTPAGQRACLHLHGALPYFMIRPMEDDNVGVTAQFEDPDSLTALLPELESALESAMAVSAGRPGGAPPSAAPNNERGKASIASSSRRWAQQQRVLAKLEVVRGVPFYGYHGEEALFIKVYVNNPSLTGKVASVLQAGHVISTRFQPYESHVPYLLQVFIDYNISGMSYVHLKNALFLLPLP 853
M +D + V V VD+Y++ ++PVVRIFG TPAGQ+A +H+HG PYF R +D + FEDP+ L LLP L +E+A A ++ + + +++ R+ + R++AK+ +V+G PFYGYH LF+++++ NP + V +L++G + RFQPYE+H+P+LLQVF DYNI GM+YV N F PLP
Sbjct: 1 MDDEDVEELRVEAVVVDYYMNSPLPVNAIKKIPTSPCYLRAREVPVVRIFGATPAGQKALIHVHGIFPYFYFRAEDDPD------FEDPERLRTLLPRLAKDIEAANAS--------------KQQQRQQNNGNATTRF-KSSRIIAKMLIVQGTPFYGYHPRPKLFVQIFLYNPRVVTSVVQLLESGGIAERRFQPYEAHIPFLLQVFADYNIEGMNYVAFGNVKFRFPLP 211
BLAST of mRNA_H-paniculata_contig2242.5970.1 vs. uniprot
Match: A0A6G0XLP9_9STRA (DNA polymerase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XLP9_9STRA) HSP 1 Score: 151 bits (381), Expect = 1.040e-32 Identity = 86/228 (37.72%), Postives = 133/228 (58.33%), Query Frame = 2
Query: 236 ISVRVVNVDWYLSEES------------------KLPVVRIFGCTPAGQRACLHLHGALPYFMIRPMEDDNVGVTAQFEDPDSLTALLPELESALESAMAVSAGRPGGAPPSAAPNNERGKASIASSSRRWAQQQRVLAKLEVVRGVPFYGYHGEEALFIKVYVNNPSLTGKVASVLQAGHVISTRFQPYESHVPYLLQVFIDYNISGMSYVHLKNALFLLPLPESSS 865
+ V VV+V++Y+++ K+PVVRIFG TPAGQ+ C+H+HG PYF +R E+D F+ ++L LLP + +ESA+ N + + ++++R +AKL VV+G+PFYGYH E LFIKV++ +P++T ++ V+++G V FQPYE+H+PYLLQVF DY+I GM+++H+ F LPLP++ S
Sbjct: 6 LRVEVVDVNYYMAKPLPRRAIDSLIEGPCYQRAYKVPVVRIFGATPAGQKCCVHIHGIYPYFYMR-CENDRA-----FDTGEALAELLPTVARDIESAV----------------KNLSQQVNDKAANQRHTVS---IAKLVVVKGIPFYGYHSSEKLFIKVFLYDPAMTSRIVQVVESGLVAQRVFQPYEAHIPYLLQVFADYHIEGMNFLHIYKYKFRLPLPQTQS 208
BLAST of mRNA_H-paniculata_contig2242.5970.1 vs. uniprot
Match: A0A6A3UTE3_9STRA (DNA polymerase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UTE3_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.990e-32 Identity = 87/222 (39.19%), Postives = 124/222 (55.86%), Query Frame = 2
Query: 284 KLPVVRIFGCTPAGQRACLHLHGALPYFMIRPMEDDNVGVTAQFEDPDSLTALLPELESALESAMAVSAGRPGGAPPSAAPNNERGKASIASSSRRWAQQQRVLAKLEVVRGVPFYGYHGEEALFIKVYVNNPSLTGKVASVLQAGHVISTRFQPYESHVPYLLQVFIDYNISGMSYVHLKNALFLLPLPES----------------SSIPASQLPDIDKG 901
++PVVRIFG TPAGQ+A +H+HG PYF R +D + FEDP L LLP L +E+A A ++ + + +S+ R+ R +AK+ +V+G PFYGYH + LF+++++ NP + V VL++G V RFQPYE+HVP+LLQVF DYNI GM+ V N F PLP + S+IP ++ +DKG
Sbjct: 43 EVPVVRIFGATPAGQKALVHVHGIFPYFYFRAEDDPD------FEDPKRLRTLLPRLAKDIEAANAS--------------KQQQNRQNKGNSTARY-NAARTIAKMMIVQGTPFYGYHPKPKLFVQIFLYNPRVVTSVVQVLESGCVGERRFQPYEAHVPFLLQVFADYNIEGMNSVAFSNVKFRFPLPVTQEHLDHDLDEYPSILLSTIPVRKINGLDKG 243 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2242.5970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2242.5970.1 >prot_H-paniculata_contig2242.5970.1 ID=prot_H-paniculata_contig2242.5970.1|Name=mRNA_H-paniculata_contig2242.5970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2060bp MAAQDSPLISVRVVNVDWYLSEESKLPVVRIFGCTPAGQRACLHLHGALPback to top mRNA from alignment at H-paniculata_contig2242:10622..21877+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2242.5970.1 ID=mRNA_H-paniculata_contig2242.5970.1|Name=mRNA_H-paniculata_contig2242.5970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11256bp|location=Sequence derived from alignment at H-paniculata_contig2242:10622..21877+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2242:10622..21877+ >mRNA_H-paniculata_contig2242.5970.1 ID=mRNA_H-paniculata_contig2242.5970.1|Name=mRNA_H-paniculata_contig2242.5970.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=12360bp|location=Sequence derived from alignment at H-paniculata_contig2242:10622..21877+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |