prot_H-paniculata_contig2239.5960.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2239.5960.1
Unique Nameprot_H-paniculata_contig2239.5960.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length388
Homology
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BLAST of mRNA_H-paniculata_contig2239.5960.1 vs. uniprot
Match: D8LL69_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL69_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 4.350e-22
Identity = 52/63 (82.54%), Postives = 59/63 (93.65%), Query Frame = 0 
Query:   82 IPFALPQTFELEQVTGKIADVEGALDGTRNYHGITDSALLFQELLSLRKKEEQIRELQLYLLK 144
            +PFALPQ +EL+QVT KIA+VEGALDGTRNYHGIT+ ALL QEL+SLRKKEEQIRELQL+LLK
Sbjct:    6 LPFALPQHYELDQVTKKIANVEGALDGTRNYHGITEQALLVQELISLRKKEEQIRELQLFLLK 68
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2239.5960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL69_ECTSI4.350e-2282.54EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2239contigH-paniculata_contig2239:4855..20527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2239.5960.1mRNA_H-paniculata_contig2239.5960.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2239 4855..20527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2239.5960.1 ID=prot_H-paniculata_contig2239.5960.1|Name=mRNA_H-paniculata_contig2239.5960.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=388bp
SYISRCSSASIRKKGPHSLFVMERIAPRPSSGTTVPLTVGSSVGTHGAGS
QALAGGAGTAIQRATSGGATATAGGMTAAPSIPFALPQTFELEQVTGKIA
DVEGALDGTRNYHGITDSALLFQELLSLRKKEEQIRELQLYLLKVWAPTF
GGGVTTSTSPTAPARSSVPRGAGAGAGGTLAIGSAAMGGARGGGRAAAAS
GLSSSHATVRPAAPPPPQQRPIPQHSLVHLLPPTSSRPTSAAAAASTTSS
SAVTATTNSLKRRRPPSPMGQAAPGATEGCASGSTPPGPPNRESVVSATH
GGHASKTTLVASGGGDGGDDVGGGVLLPATSDSSTLNGNNSGVTSPVAHG
EHVSPRAGPSYSPAGPTGQPYSPGRDNGAATAAGGEAG
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