mRNA_H-paniculata_contig22362.5954.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig22362.5954.1
Unique NamemRNA_H-paniculata_contig22362.5954.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig22362.5954.1 vs. uniprot
Match: A0A0Y0JJ88_9PHAE (Mg-protoporphyrin IX chelatase n=17 Tax=Fucales TaxID=3009 RepID=A0A0Y0JJ88_9PHAE)

HSP 1 Score: 371 bits (953), Expect = 1.500e-127
Identity = 187/199 (93.97%), Postives = 191/199 (95.98%), Query Frame = 1 
Query:    1 MNNQKLKPIKTPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHPKEEITEQTETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM 597
            M+ Q LK I TPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLP+IEVIKDDPFNRHP EE  ++ ETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM
Sbjct:    1 MSKQTLKNINTPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPKIEVIKDDPFNRHPNEEAFQRFETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM 199
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BLAST of mRNA_H-paniculata_contig22362.5954.1 vs. uniprot
Match: D1J7A0_ECTSI (Mg-protoporphyrin IX chelatase n=40 Tax=Phaeophyceae TaxID=2870 RepID=D1J7A0_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 4.290e-127
Identity = 186/199 (93.47%), Postives = 189/199 (94.97%), Query Frame = 1 
Query:    1 MNNQKLKPIKTPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHPKEEITEQTETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM 597
            M+ Q LK   TPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHP +E  E  ETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEG+KAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM
Sbjct:    1 MSKQNLKDKTTPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHPTDETLENPETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM 199
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BLAST of mRNA_H-paniculata_contig22362.5954.1 vs. uniprot
Match: A0A1I9LVR8_9PHAE (Mg-protoporphyrin IX chelatase n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVR8_9PHAE)

HSP 1 Score: 369 bits (948), Expect = 8.640e-127
Identity = 186/199 (93.47%), Postives = 189/199 (94.97%), Query Frame = 1 
Query:    1 MNNQKLKPIKTPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHPKEEITEQTETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM 597
            M  + LK   TPIFPFTAIVGQEEMKLAL LNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHP E+  EQ+ETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM
Sbjct:    1 MREKNLKDRSTPIFPFTAIVGQEEMKLALTLNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHPNEKTIEQSETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM 199
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BLAST of mRNA_H-paniculata_contig22362.5954.1 vs. uniprot
Match: A0A2I4Q243_9PHAE (Mg-protoporphyrin IX chelatase n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q243_9PHAE)

HSP 1 Score: 367 bits (942), Expect = 7.060e-126
Identity = 185/199 (92.96%), Postives = 191/199 (95.98%), Query Frame = 1 
Query:    1 MNNQKLKPIKTPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHPKEEITEQTETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM 597
            MN+ +LK  +TPIFPFTAIVGQEEMKLAL+LNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFN  P E+ TE+ ETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM
Sbjct:    1 MNDPRLKSQETPIFPFTAIVGQEEMKLALQLNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNSQPLEKNTEEKETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM 199
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BLAST of mRNA_H-paniculata_contig22362.5954.1 vs. uniprot
Match: A0A7U3NQN5_9STRA (Mg-protoporphyrin IX chelatase n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7U3NQN5_9STRA)

HSP 1 Score: 357 bits (916), Expect = 8.300e-122
Identity = 181/199 (90.95%), Postives = 187/199 (93.97%), Query Frame = 1 
Query:   19 KPIKTPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHPKE------EITEQTETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM 597
            K I+TPIFPFTAIVGQEEMKLAL+LNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHP E        T++ ET F+KIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPA+FVLVGSGNPEEGELRPQLLDRFGM
Sbjct:    9 KSIETPIFPFTAIVGQEEMKLALQLNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHPDEAKLDNLSSTDEIETTFVKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPARFVLVGSGNPEEGELRPQLLDRFGM 207
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BLAST of mRNA_H-paniculata_contig22362.5954.1 vs. uniprot
Match: CHLI_TRICV (Magnesium-chelatase subunit ChlI n=68 Tax=cellular organisms TaxID=131567 RepID=CHLI_TRICV)

HSP 1 Score: 348 bits (892), Expect = 4.360e-118
Identity = 180/211 (85.31%), Postives = 186/211 (88.15%), Query Frame = 1 
Query:    1 MNNQKLKPIKTPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHPKE------EIT------EQTETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM 597
            M  Q LK   TP+FPFTAIVGQEEMKLAL+LNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEV+KDDPFN H  +      EI       E  ETE IKIPMVDLPLGATEDRVCGTIDIEKALTEG+KAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPA+FVLVGSGNPEEGELRPQLLDRFGM
Sbjct:    1 MVTQDLKKFSTPVFPFTAIVGQEEMKLALQLNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVVKDDPFNSHKSDLDLMGNEIKLAIQNGESLETELIKIPMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPARFVLVGSGNPEEGELRPQLLDRFGM 211
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BLAST of mRNA_H-paniculata_contig22362.5954.1 vs. uniprot
Match: A0A8E6D6H5_9PHAE (Magnesium chelatase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D6H5_9PHAE)

HSP 1 Score: 346 bits (888), Expect = 1.400e-117
Identity = 174/205 (84.88%), Postives = 184/205 (89.76%), Query Frame = 1 
Query:    1 MNNQKLKPIKTPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHPKEE------ITEQTETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM 597
            M  Q  K +  PIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLP+IEVIKDDPFN  P E        ++  ET FIKIPM+DLPLGATEDRVCGTIDIEKALTEG+KAFEPGLLAKANRGILYVDEVNLLDDHLVD+LLDSAASGWNTVEREGISI+HP+QFVLVGSGNPEEGELRPQLLDRFG+
Sbjct:    1 MTKQSTKKLNNPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPKIEVIKDDPFNLDPTESNLLARITSKNVETAFIKIPMIDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISIKHPSQFVLVGSGNPEEGELRPQLLDRFGL 205
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BLAST of mRNA_H-paniculata_contig22362.5954.1 vs. uniprot
Match: A0A0K2RWF8_9STRA (Mg-protoporphyrin IX chelatase n=1 Tax=Triparma laevis TaxID=1534972 RepID=A0A0K2RWF8_9STRA)

HSP 1 Score: 346 bits (888), Expect = 1.710e-117
Identity = 176/211 (83.41%), Postives = 188/211 (89.10%), Query Frame = 1 
Query:    1 MNNQKLKPIKTPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHP----------KEEIT--EQTETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM 597
            M  Q LK  +TP+FPFTAIVGQEEMKLAL+LNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEI ++KDDPFN HP          K+ I   E+ + +FIKIPM+DLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRG+LYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPA+FVLVGSGNPEEGELRPQLLDRFGM
Sbjct:    1 MVTQDLKKFETPVFPFTAIVGQEEMKLALQLNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEITIVKDDPFNSHPTDLDLMGNDVKQSIINGEKLQNDFIKIPMIDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGLLYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPARFVLVGSGNPEEGELRPQLLDRFGM 211
[Close]
BLAST of mRNA_H-paniculata_contig22362.5954.1 vs. uniprot
Match: A0A023HBB8_9STRA (Mg-protoporphyrin IX chelatase n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A023HBB8_9STRA)

HSP 1 Score: 346 bits (888), Expect = 1.760e-117
Identity = 180/208 (86.54%), Postives = 183/208 (87.98%), Query Frame = 1 
Query:   10 QKLKPIKTPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHPKE------------EITEQTETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM 597
            Q LK   TPIFPFTAIVGQEEMKLAL+LNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFN H  +            E  E  ET  IKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPA+FVLVGSGNPEEGELRPQLLDRFGM
Sbjct:    4 QDLKKFTTPIFPFTAIVGQEEMKLALQLNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNSHKSDLDLMGNDVKNAIERGETLETALIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPARFVLVGSGNPEEGELRPQLLDRFGM 211
[Close]
BLAST of mRNA_H-paniculata_contig22362.5954.1 vs. uniprot
Match: A0A023HBS0_9STRA (Mg-protoporphyrin IX chelatase n=5 Tax=Bacillariophyta TaxID=2836 RepID=A0A023HBS0_9STRA)

HSP 1 Score: 345 bits (884), Expect = 7.150e-117
Identity = 175/211 (82.94%), Postives = 186/211 (88.15%), Query Frame = 1 
Query:    1 MNNQKLKPIKTPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVIKDDPFNRHPKE------------EITEQTETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM 597
            M  + LK  +TP+FPFTAIVGQEEMKLAL+LNVIDPKIGGVMIMGDRGTGKSTTIRAI DLLP+IEV+K+DPFN H  +            +  E  ETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRG+LYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPA+FVLVGSGNPEEGELRPQLLDRFGM
Sbjct:    1 MVTENLKKFETPVFPFTAIVGQEEMKLALQLNVIDPKIGGVMIMGDRGTGKSTTIRAITDLLPKIEVVKNDPFNSHKSDLELMGNEVRSAIQNNEPIETEFIKIPMVDLPLGATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGLLYVDEVNLLDDHLVDILLDSAASGWNTVEREGISIRHPARFVLVGSGNPEEGELRPQLLDRFGM 211
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22362.5954.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0Y0JJ88_9PHAE1.500e-12793.97Mg-protoporphyrin IX chelatase n=17 Tax=Fucales Ta... [more]
D1J7A0_ECTSI4.290e-12793.47Mg-protoporphyrin IX chelatase n=40 Tax=Phaeophyce... [more]
A0A1I9LVR8_9PHAE8.640e-12793.47Mg-protoporphyrin IX chelatase n=1 Tax=Pleurocladi... [more]
A0A2I4Q243_9PHAE7.060e-12692.96Mg-protoporphyrin IX chelatase n=1 Tax=Dictyopteri... [more]
A0A7U3NQN5_9STRA8.300e-12290.95Mg-protoporphyrin IX chelatase n=1 Tax=Schizocladi... [more]
CHLI_TRICV4.360e-11885.31Magnesium-chelatase subunit ChlI n=68 Tax=cellular... [more]
A0A8E6D6H5_9PHAE1.400e-11784.88Magnesium chelatase n=1 Tax=Ishige okamurae TaxID=... [more]
A0A0K2RWF8_9STRA1.710e-11783.41Mg-protoporphyrin IX chelatase n=1 Tax=Triparma la... [more]
A0A023HBB8_9STRA1.760e-11786.54Mg-protoporphyrin IX chelatase n=2 Tax=Bacillariop... [more]
A0A023HBS0_9STRA7.150e-11782.94Mg-protoporphyrin IX chelatase n=5 Tax=Bacillariop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22362contigH-paniculata_contig22362:3592..4188 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score370.5
Seed ortholog evalue4.8e-100
Seed eggNOG ortholog2880.D1J7A0
Preferred namechlI
KEGG rclassRC01012
KEGG koko:K03405
KEGG ReactionR03877
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009719,GO:0009725,GO:0009735,GO:0009987,GO:0010007,GO:0010033,GO:0015994,GO:0015995,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016851,GO:0016874,GO:0016887,GO:0017111,GO:0018130,GO:0019438,GO:0030312,GO:0032991,GO:0033013,GO:0033014,GO:0034641,GO:0042221,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044271,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046483,GO:0050896,GO:0051002,GO:0051003,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494
EggNOG free text desc.ligase activity, forming nitrogen-metal bonds, forming coordination complexes
EggNOG OGs2QRUY@2759,COG1239@1
EC6.6.1.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size597
Cds size597
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929620.8681424-CDS-H-paniculata_contig22362:3591..41881622929620.8681424-CDS-H-paniculata_contig22362:3591..4188Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22362 3592..4188 -
1691480938.5584905-CDS-H-paniculata_contig22362:3591..41881691480938.5584905-CDS-H-paniculata_contig22362:3591..4188Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22362 3592..4188 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22362.5954.1prot_H-paniculata_contig22362.5954.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig22362 3592..4188 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig22362.5954.1

>prot_H-paniculata_contig22362.5954.1 ID=prot_H-paniculata_contig22362.5954.1|Name=mRNA_H-paniculata_contig22362.5954.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=199bp
MNNQKLKPIKTPIFPFTAIVGQEEMKLALELNVIDPKIGGVMIMGDRGTG
KSTTIRAIADLLPEIEVIKDDPFNRHPKEEITEQTETEFIKIPMVDLPLG
ATEDRVCGTIDIEKALTEGIKAFEPGLLAKANRGILYVDEVNLLDDHLVD
ILLDSAASGWNTVEREGISIRHPAQFVLVGSGNPEEGELRPQLLDRFGM
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mRNA from alignment at H-paniculata_contig22362:3592..4188-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig22362.5954.1 ID=mRNA_H-paniculata_contig22362.5954.1|Name=mRNA_H-paniculata_contig22362.5954.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=597bp|location=Sequence derived from alignment at H-paniculata_contig22362:3592..4188- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACAACCAAAAATTAAAACCTATTAAAACACCTATTTTTCCATTTAC
AGCGATTGTTGGTCAAGAAGAAATGAAACTGGCTTTAGAATTAAATGTTA
TTGATCCAAAAATTGGTGGAGTAATGATTATGGGTGACCGAGGAACTGGA
AAATCTACTACAATTAGAGCAATTGCAGACTTACTTCCGGAAATTGAAGT
TATTAAAGATGATCCCTTCAATAGACACCCAAAAGAAGAAATAACCGAAC
AAACTGAAACAGAATTCATTAAAATTCCTATGGTTGATTTACCTCTAGGT
GCTACAGAAGATCGAGTTTGTGGGACCATAGATATTGAAAAAGCGTTAAC
TGAAGGAATAAAAGCCTTTGAACCTGGTCTCTTAGCAAAAGCAAATCGTG
GTATTCTATATGTAGATGAAGTAAACTTACTTGATGATCATTTAGTAGAT
ATTTTATTAGATTCTGCAGCGTCAGGATGGAATACGGTCGAACGGGAAGG
GATTTCTATTCGTCATCCTGCACAATTTGTTTTAGTTGGTTCTGGAAATC
CAGAAGAAGGAGAATTACGTCCCCAATTACTCGATCGTTTTGGTATG
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Coding sequence (CDS) from alignment at H-paniculata_contig22362:3592..4188-

>mRNA_H-paniculata_contig22362.5954.1 ID=mRNA_H-paniculata_contig22362.5954.1|Name=mRNA_H-paniculata_contig22362.5954.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1194bp|location=Sequence derived from alignment at H-paniculata_contig22362:3592..4188- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACAACCAAAAATTAAAACCTATTAAAACACCTATTTTTCCATTTAC
AGCGATTGTTGGTCAAGAAGAAATGAAACTGGCTTTAGAATTAAATGTTA
TTGATCCAAAAATTGGTGGAGTAATGATTATGGGTGACCGAGGAACTGGA
AAATCTACTACAATTAGAGCAATTGCAGACTTACTTCCGGAAATTGAAGT
TATTAAAGATGATCCCTTCAATAGACACCCAAAAGAAGAAATAACCGAAC
AAACTGAAACAGAATTCATTAAAATTCCTATGGTTGATTTACCTCTAGGT
GCTACAGAAGATCGAGTTTGTGGGACCATAGATATTGAAAAAGCGTTAAC
TGAAGGAATAAAAGCCTTTGAACCTGGTCTCTTAGCAAAAGCAAATCGTG
GTATTCTATATGTAGATGAAGTAAACTTACTTGATGATCATTTAGTAGAT
ATTTTATTAGATTCTGCAGCGTCAGGATGGAATACGGTCGAACGGGAAGG
GATTTCTATTCGTCATCCTGCACAATTTGTTTTAGTTGGTTCTGGAAATC
CAGAAGAAGGAGAATTACGTCCCCAATTACTCGATCGTTTTGGTATGATG
AACAACCAAAAATTAAAACCTATTAAAACACCTATTTTTCCATTTACAGC
GATTGTTGGTCAAGAAGAAATGAAACTGGCTTTAGAATTAAATGTTATTG
ATCCAAAAATTGGTGGAGTAATGATTATGGGTGACCGAGGAACTGGAAAA
TCTACTACAATTAGAGCAATTGCAGACTTACTTCCGGAAATTGAAGTTAT
TAAAGATGATCCCTTCAATAGACACCCAAAAGAAGAAATAACCGAACAAA
CTGAAACAGAATTCATTAAAATTCCTATGGTTGATTTACCTCTAGGTGCT
ACAGAAGATCGAGTTTGTGGGACCATAGATATTGAAAAAGCGTTAACTGA
AGGAATAAAAGCCTTTGAACCTGGTCTCTTAGCAAAAGCAAATCGTGGTA
TTCTATATGTAGATGAAGTAAACTTACTTGATGATCATTTAGTAGATATT
TTATTAGATTCTGCAGCGTCAGGATGGAATACGGTCGAACGGGAAGGGAT
TTCTATTCGTCATCCTGCACAATTTGTTTTAGTTGGTTCTGGAAATCCAG
AAGAAGGAGAATTACGTCCCCAATTACTCGATCGTTTTGGTATG
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