prot_H-paniculata_contig2234.5945.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2234.5945.1
Unique Nameprot_H-paniculata_contig2234.5945.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length82
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2234.5945.1 vs. uniprot
Match: D8LK98_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK98_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 7.080e-18
Identity = 52/65 (80.00%), Postives = 55/65 (84.62%), Query Frame = 0 
Query:   12 RYMAIVDAASGNSALD-SSTSEH-DTSPSEDDGGMMAEILTDRLMEVASKMEASAPQPAEELSDG 74
            RYMAIV+AA+  SALD SSTSEH DTSPSEDDGGMMAEILTDRLMEV SKME SA  P  +LSDG
Sbjct:  662 RYMAIVEAANVKSALDNSSTSEHTDTSPSEDDGGMMAEILTDRLMEVCSKMEQSAASPEADLSDG 726
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2234.5945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LK98_ECTSI7.080e-1880.00Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2234contigH-paniculata_contig2234:21258..21503 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2234.5945.1mRNA_H-paniculata_contig2234.5945.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2234 21258..21503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2234.5945.1 ID=prot_H-paniculata_contig2234.5945.1|Name=mRNA_H-paniculata_contig2234.5945.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp
PAVARAAPPAPRYMAIVDAASGNSALDSSTSEHDTSPSEDDGGMMAEILT
DRLMEVASKMEASAPQPAEELSDGEGQGDASG
back to top