mRNA_H-paniculata_contig22181.5886.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig22181.5886.1
Unique NamemRNA_H-paniculata_contig22181.5886.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig22181.5886.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI)

HSP 1 Score: 237 bits (604), Expect = 5.010e-70
Identity = 163/391 (41.69%), Postives = 213/391 (54.48%), Query Frame = 1
Query:    1 ERNYLYVLLVAGFAILAIPIYHEYTLDPWEIIPKQTDMLALASIVLACILMAIYPFIRKVDDIFSISKELTIVTVALLVLAVGGKLVDKYGDDDLIRWIGPTNLFFFVTAFIFGVSVVDPLRRLAFDPLAGFKRKHVGRVLLNRRDVRTSMGKICVRHSAVAGGKRDFVSCDRLSPLSLRETARCESEDEG---------RPASVTSQVDEGVIGGSGNGDGGTNGRESTALGGT----AVVTSSLRNPANYGPFITTIHPNSNSNHYSRNN------------FWTGREEGAG----------EVWSFERVASTPLLAVAFEEFSRKALCHESVLFLSEVSRYESLDYSVA--DSPLSAPSQYNDVTQFDALCRLAHTFVRTGAREEINI 1062
            ERNY+ VLLV    ++AIPIY EYTL+ WEIIPKQT +L   ++V A  L  IYPFIR VDD+F+ISKEL +VTVA++ LAV  K   ++G     RW+G  N+  F+ A +FG+S+VDPLRRLA DPLA  KR +  RVLL+R    T+        S V+ G+    S  R +     E AR E  D G             V++ V   V+G         NG  +T+   T    A  T + R P N   F       SN      N             F+ GR  G G          EVW+FER+A TPLLAVAFE++S++ALCHESVLFL+EVSRY+  DY+    D+  S+PSQ      F   C + +TF++ G+ EE+NI
Sbjct:   80 ERNYMVVLLVVSVGMMAIPIYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELLLVTVAIVCLAVVQKAAAEWGGVYEQRWVG-NNISIFIAAVLFGISIVDPLRRLAMDPLAATKRNYADRVLLSR----TAPDSTVRTASGVSSGRSRDPSRIRANS---EEEARLEEGDLGGVLDKDETTTAGDVSNVVASAVVG---------NGVITTSTADTNDAVAAGTWNEREPINTSVFTKQSSSVSNDTSIGGNRRDVVQRGPRERAFFRGRRGGGGGRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDAIRSSPSQ------FGTFCYITNTFIKAGSPEEVNI 447          
BLAST of mRNA_H-paniculata_contig22181.5886.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 1.030e-61
Identity = 152/385 (39.48%), Postives = 212/385 (55.06%), Query Frame = 1
Query:    1 ERNYLYVLLVAGFAILAIPIYHEYTLDPWEIIPKQTDMLALASIVLACILMAIYPFIRKVDDIFSISKELTIVTVALLVLAVGGKLVDKYGDDDLIRWIGPTNLFFFVTAFIFGVSVVDPLRRLAFDPLAGFKRKHVGRVLLNRRDVRTSMGKICVRHSAVAGGKRDFVSCDRLSPLSLRETARCESEDEGRPASVTSQVDEGVIGGSGNGDGGTNGRESTALGGTAVVTSSLRNPANYGPFI------------TTIHPNSNSNHYSRNNFWTGREEGAG-------------------EVWSFERVASTPLLAVAFEEFSRKALCHESVLFLSEVSRYESLDYSVADSPLSAPSQYNDVTQFDALCRLAHTFVRTGAREEINI 1062
            ERNYL VLL+A   ILAIPIYHEYTL+ W+ IPKQT +L   + VLA +L+ IYPFIR VDD+F+IS EL  VTV ++V+ +  ++VDK+G +   RW+  +N+     A +F +S+V PLRRLA DPLA  KR +  RVLL+R +  ++     +  S    G+   +  D    ++       E E+ G    + +    GV GGS  G   T    S+A+ G+ V+T+S  +     P              T++   S S    R+    G + G G                   EVW FER+  TPLLA AFE++S++ALCHESVLFLSEVSRY++ DY+   +P +A       TQF   C +  TF++ GA EE+NI
Sbjct:  174 ERNYLAVLLLASIGILAIPIYHEYTLEVWDAIPKQTSILKAQARVLAVMLVCIYPFIRNVDDLFNISTELITVTVTIVVVTIVQEVVDKWGGNFEQRWL-TSNISVVFVAVLFCISIVAPLRRLALDPLAATKRNYADRVLLSRTESHSTRSASGI--SPERAGRSSRIVDDSDDEVAF------EDEELGGVPGMDTTAAAGVGGGS-TGKVAT----SSAVVGSGVITTSTADANVVAPRTWKGREMTIANGSTSVPKGSGSTGKRRDAVQRG-QRGRGXXXXXXXXXXXXPSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYA---TPTNAAGTCP--TQFGTFCYITDTFIKAGAPEEVNI 538          
BLAST of mRNA_H-paniculata_contig22181.5886.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 5.630e-56
Identity = 144/390 (36.92%), Postives = 194/390 (49.74%), Query Frame = 1
Query:    1 ERNYLYVLLVAGFAILAIPIYHEYTLDPWEIIPKQTDMLALASIVLACILMAIYPFIRKVDDIFSISKELTIVTVALLVLAVGGKLVDKYGDDDLIRWIGPTNLFFFVTAFIFGVSVVDPLRRLAFDPLAGFKRKHVGRVLLNRRDVRTSMGKICVRHSAVAGGKRDFVSCDRLSPLSLRETARCESED---EGRPASVTSQVDEGVIGGSGNGDGGTNGRESTALGGTAVVTSSLRNPANYGPFITTIHPNSNSNHYSRNNFWTGREEGAG---------------------------------EVWSFERVASTPLLAVAFEEFSRKALCHESVLFLSEVSRYESLDYSVADSPLSAPSQYNDVTQFDALCRLAHTFVRTGAREEINI 1062
            E NY+ VLLVA   +LAIPIYHEYTL  W+ I KQT++L + + VLA  L  IYPFIR VDD+FSIS EL IVT A +VL    ++  ++      RW    N+       +FGVS++ PLRRLA DPLA  +  +  RVL NR +  ++  +        A G    + C+     S RE      E    E     +T+   EG   G            ++A  G AV TSS        P   T    +NS+  +   ++   + GAG                                 ++W FER+  TPLLAVAFE++S+KALCHES LFLSEVSRY++ DY++A    S  S     TQF   C +  TF++ G+ EE+NI
Sbjct:  163 EHNYMVVLLVASVGMLAIPIYHEYTLGVWDAISKQTNILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVT-ATIVLITSEEVDGQWWGPYERRWFA-NNMSVVFMIILFGVSIIAPLRRLASDPLAATRHNYANRVLPNRTEPHSTARR--------ASGFSSGLDCESSMMCSEREDETTLEEGKLGEALATGITTTEREGGSAGY---------VAASATIGKAVTTSSADANGAVAPHTWTDREPTNSSVVTTATWFVSNDNGAGGNRLDGVRRGQSEIGLDRGRDGGRRSRSHKQDIDIWDFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRYQNGDYAMATRASSGSSC---PTQFGTFCYITDTFIKAGSPEEVNI 530          
BLAST of mRNA_H-paniculata_contig22181.5886.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 2.290e-53
Identity = 137/348 (39.37%), Postives = 185/348 (53.16%), Query Frame = 1
Query:  109 DMLALASIVLACILMAIYPFIRKVDDIFSISKELTIVTVALLVLAVGGKLVDKYGDDDLIRWIGPTNLFFFVTAFIFGVSVVDPLRRLAFDPLAGFKRKHVGRVLLNRRDVRTSMGKICVRHSAVAGGKRDFVSCDRLSPLSLRETARCESEDEGRPASVTSQVDEGVIGGSGN----------GDGGTNGRESTALGGTAVVTSSLRNPANYGPFI--TTIHPNSNSNHYSRNNFW-------TGREEGAG----------EVWSFERVASTPLLAVAFEEFSRKALCHESVLFLSEVSRYESLDYSVADSPLSAPSQYNDVTQFDALCRLAHTFVRTGAREEINIR 1065
            D L+  ++ LAC     +PFIR VDD+FSISKE+ IVT A+++LA+   +VDK+G     RWI  +    FV A +FGVS+VDPLRRLAFDPLA  +  H  R+LL+R +   S+ +     S + GG +      R    S  E    E + EG P   T+       GG G+          G G T    + A G  A  T + R P N       ++   N NS    R  F        +GR+ G            EVW FER+ASTPLLA AFE++S++ALCHESVLFLSEVSRY++ +Y +   P  A S  +   QF + C +  TF++ G+ EE+NIR
Sbjct:   91 DDLSAFAVALACT----FPFIRNVDDLFSISKEIIIVTAAVVILAIEQNVVDKWGGVYERRWIDKSVSILFV-AVLFGVSIVDPLRRLAFDPLAATQHNHANRILLSRTEPHNSVRRELGFSSVIGGGSQ------RTRGDSEEEARLEEGQREGVPGKDTTTA----AGGDGDTGDVPTSAAIGRGATTAPTADADGAVAPCTWNEREPTNSSVVAEGSSSVSNDNSTRGRRGAFQRVQRARGSGRDRGCSSRSRSDREEMEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPM---PTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNIR 420          
BLAST of mRNA_H-paniculata_contig22181.5886.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 3.750e-53
Identity = 147/392 (37.50%), Postives = 201/392 (51.28%), Query Frame = 1
Query:    1 ERNYLYVLLVAGFAILAIPIYHEYTLDPWEIIPKQTDMLALASIVLACILMAIYPFIRKVDDIFSISKELTIVTVALLVLAVGGKLV---DKYGDDDLIRWIGPTNLFF---FVTAFIFGVSVVDPLRRLAFDPLAGFKRKHVGRVLLNRRDVRTSMGKICVRHSAVAGGKRDFVSCDRLSPLSLRETARCESEDEGRPASVTSQVDEGVIGGSGNGDGGTNGRESTALGGTAVVTSSLRN------PANY-GPFIT-----TIHPNSNSNHYSRNNFWTGREEGAG-------------------EVWSFERVASTPLLAVAFEEFSRKALCHESVLFLSEVSRYESLDYSVADSPLSAPSQYNDVTQFDALCRLAHTFVRTGAREEINIR 1065
            ERNYL VLL+A   ILAIPIY EYTL+ W+ IPKQT +L   + VLA +L+ IYPFIR VDD+F+ISKEL  VTV + V+            + +  L + + PT   F      + +   SVV PLRRLA DPLA  KR +  RVLL+R +  ++     +      G  R       +   S  E A  + E  G P   T+         +G G G T    ++A+ G+ V+T+S  +      P  + G  +T     T  P  +S+   R +     + G G                   EVW FER+  TPLLA AFE++S++ALCHESVLFLSEVSRY++ DY+   +  +        TQF   C +  TF++ GA EE+NIR
Sbjct:   96 ERNYLAVLLLASIGILAIPIYQEYTLEVWDAIPKQTSILKTQARVLAVMLVCIYPFIRNVDDLFNISKELITVTVTIAVVTCEAHSFVHRSTHVESCLQQHVPPTTKRFPYPMSPSNLSTRSVVAPLRRLALDPLAATKRNYADRVLLSRTESHSTRSASGISPERAGGSSR-------IVDDSEDEVAFEDEELGGVPGFDTTAA-------AGVGGGSTGKVATSAVVGSGVITTSSADANGAVAPCPWKGRELTIANGSTSVPKGSSSTGKRRDAVQRGQRGRGXXXXXXXXXXXXXSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCP----TQFGTFCFITDTFIKAGAPEEVNIR 469          
BLAST of mRNA_H-paniculata_contig22181.5886.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 5.790e-49
Identity = 128/354 (36.16%), Postives = 173/354 (48.87%), Query Frame = 1
Query:    1 ERNYLYVLLVAGFAILAIPIYHEYTLDPWEIIPKQTDMLALASIVLACILMAIYPFIRKVDDIFSISKELTIVTVALLVLAVGGKLVDKYGDDDLIRWIGPTNLFFFVTAFIFGVSVVDPLRRLAFDPLAGFKRKHVGRVLLNRRDVRTSMGKICVRHSAVAGGKRDFVSCDRLSPLSLRETARCESEDEGRPASVTSQVDEGVIGGSGNGDGGTNGRESTALGGTAVVTSSLRNPANYGPFITTIHPNSNSNHYSRNNFWTGREEGAGEVWSFERVASTPLLAVAFEEFSRKALCHESVLFLSEVSRYESLDYSVADSPLSAPSQYNDVTQFDALCRLAHTFVRTGAREEINI 1062
            ERNY+ VLLVA   +LAIPIYHE+TL  W+ I KQT +L + + VLA  L  IYPFIR VDD+FSIS EL IVT  + ++ +  ++   +G     RW+   NL       +FGVS+V PLRRLA DP A  +R +  RVL +  +           HS   GG       +RL  +   ++ R   +D GR                   DGG   R                                               +   ++W FER+  TPLLAVAFE++S++ALCHES LFLSEVSRY++ DY+     + A S  +  TQF   C +  TF++ G+ EE+NI
Sbjct:  163 ERNYMVVLLVASVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIGLITIVQEIDGLWGGCYERRWLA-NNLSVLFMIVLFGVSIVAPLRRLASDPFAATRRNYANRVLPDHTEP----------HSI--GG-------NRLDAVRRGQSER--GDDRGR-------------------DGGRRSRS---------------------------------------------HKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATT---IRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNI 427          
BLAST of mRNA_H-paniculata_contig22181.5886.1 vs. uniprot
Match: D8LJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ7_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 2.930e-48
Identity = 90/144 (62.50%), Postives = 105/144 (72.92%), Query Frame = 1
Query:    1 ERNYLYVLLVAGFAILAIPIYHEYTLDPWEIIPKQTDMLALASIVLACILMAIYPFIRKVDDIFSISKELTIVTVALLVLAVGGKLVDKYGDDDLIRWIGPTNLFFFVTAFIFGVSVVDPLRRLAFDPLAGFKRKHVGRVLLNR 432
            ERNY+ VL+VA   +LAIP+YHEYTL+ WEIIPKQTD+L   SI  A +   IYPFIR VDD+FSISKEL IVT A+++LAVG KL   YG     RW+G  NLF    A +F VSVVDPLRRLAFDPLA  KR +  RVLL+R
Sbjct:   62 ERNYVAVLMVASCGMLAIPLYHEYTLEVWEIIPKQTDILIWVSIAFAVVQACIYPFIRNVDDLFSISKELAIVTAAVILLAVGQKLEGDYGGVYERRWLG-NNLFLLFAAVVFSVSVVDPLRRLAFDPLAATKRNYADRVLLSR 204          
BLAST of mRNA_H-paniculata_contig22181.5886.1 vs. uniprot
Match: A0A6H5L7K1_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7K1_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 3.720e-44
Identity = 132/378 (34.92%), Postives = 174/378 (46.03%), Query Frame = 1
Query:    1 ERNYLYVLLVAGFAILAIPIYHEYTLDPWEIIPKQTDMLALASIVLACILMAIYPFIRKVDDIFSISKELTIVTVALLVLAVGGKLVDKYGDDDLIRWIGPTNLFFFVTAFIFGVSVVDPLRRLAFDPLAGFKRKHVGRVLLNRRDVRTSMGKICVRHSA-VAGGKRDFVSCDRLSPLSLRETARCESEDEGRPASVTSQVDEGVIGGSGNGDGGTNGRESTALGGTAVVTSSLRN---PANYGPFITTIHPNSNSNHYSRNNFWTGREEGAG--------------------EVWSFERVASTPLLAVAFEEFSRKALCHESVLFLSEVSRYESLDYSVADSPLSAPSQYNDVTQFDALCRLAHTFVRTGAREEINI 1062
            ERN+L+ L     A L +PIY + TL+ W                             KVDD+F+IS+EL IVT+  L+LA+G K    Y  D    W G  NL FF+TA +FGVSVV PLR LA DPLAG K++ + R +L RRD R+       + +A + G  R      R     L      E++D+G   +                                   +SL +   PAN  P  +   P + +  Y   NF T R  GAG                    E W FER+A  PL+A AFE ++RKALCHE VLFL EVSRY+S D+    + LS PSQY       A CR+   F+R G+REE++I
Sbjct:   73 ERNHLFFLSATVVAFLIVPIYQDMTLEVW-----------------------------KVDDLFNISRELIIVTILFLILAIGIKCGLYYEVD---MWTGG-NLNFFITAAVFGVSVVGPLRLLAVDPLAGSKQRCMDRAVLARRDTRSEDVSYSAKATADIRGSSRAVRVASRKLEEGLYGDGVDENDDDGCDTTPXXXX------------------XXXXXXXXXXXATSLYDEPPPANLSPSPSPGDPGAGNWQYQGINFCTSRGGGAGXXXXXXXXXXXXXXXXEEMVEAWDFERLARKPLVAAAFEAYTRKALCHECVLFLREVSRYQSGDFP-EPAGLSGPSQYQ------AFCRINDVFIRPGSREEVSI 392          
BLAST of mRNA_H-paniculata_contig22181.5886.1 vs. uniprot
Match: D8LJQ9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ9_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 3.120e-38
Identity = 82/149 (55.03%), Postives = 107/149 (71.81%), Query Frame = 1
Query:    1 ERNYLYVLLVAGFAILAIPIYHEYTLDPWEIIPKQTDMLALASIVLACILMAIYPFIRKVDDIFSISKELTIVTVALLVLAVGGKLVDKYGDDDLIRWIGPTNLFFFVTAFIFGVSVVDPLRRLAFDPLAGFKRKHVGRVLLNRRDVRT 447
            ERN+L+ L     A+L IPIY + TL+ WE+I KQ D+LA A++VLA  L  I+PFIRKVDD+F+IS+EL IVT+  L+LA+G K    Y + D+  W G  NL FF+TA +FGVSVV PLRRLA DPLAG K++  GR +L RR+ R+
Sbjct:   73 ERNHLFFLSAMAVALLIIPIYQDMTLEVWEVIAKQVDLLASATLVLAGTLACIFPFIRKVDDLFNISRELIIVTILFLILAIGIKC-GLYFEVDM--WTGG-NLNFFITAAVFGVSVVGPLRRLAVDPLAGSKQRCTGRAVLARRETRS 217          
BLAST of mRNA_H-paniculata_contig22181.5886.1 vs. uniprot
Match: D7FTW2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 1.220e-30
Identity = 110/354 (31.07%), Postives = 145/354 (40.96%), Query Frame = 1
Query:    1 ERNYLYVLLVAGFAILAIPIYHEYTLDPWEIIPKQTDMLALASIVLACILMAIYPFIRKVDDIFSISKELTIVTVALLVLAVGGKLVDKYGDDDLIRWIGPTNLFFFVTAFIFGVSVVDPLRRLAFDPLAGFKRKHVGRVLLNRRDVRTSMGKICVRHSAVAGGKRDFVSCDRLSPLSLRETARCESEDEGRPASVTSQVDEGVIGGSGNGDGGTNGRESTALGGTAVVTSSLRNPANYGPFITTIHPNSNSNHYSRNNFWTGREEGAGEVWSFERVASTPLLAVAFEEFSRKALCHESVLFLSEVSRYESLDYSVADSPLSAPSQYNDVTQFDALCRLAHTFVRTGAREEINI 1062
            ERNY+ VLLV+   +LAIPIYHE+TL  W+ I KQT +L + + VLA  L  IYPFIR VDD+FSIS EL IVT                                        + ++   RR            +  RVL +  +           HS   GG       +RL  +   +T R   +D GR                   DGG   R                                               +   ++W FER+  TPLLAVAFE++S++ALCHES LFLSEVSRY++ DY+      S  S     TQF   C +  TF++ G+ EE+NI
Sbjct:   72 ERNYMVVLLVSSVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTAT--------------------------------------IGLITTTRR-----------NYANRVLPDHTEP----------HSI--GG-------NRLDAVRRGQTER--GDDRGR-------------------DGGRRSRS---------------------------------------------HKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTKRASSGSSF---PTQFGTFCYITDTFIKAGSHEEVNI 288          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22181.5886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7G2T7_ECTSI5.010e-7041.69RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G2T8_ECTSI1.030e-6139.48RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JE98_9PHAE5.630e-5636.92RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTW1_ECTSI2.290e-5339.37RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LEP9_9PHAE3.750e-5337.50RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTW0_ECTSI5.790e-4936.16RGS domain-containing protein n=2 Tax=Ectocarpus s... [more]
D8LJQ7_ECTSI2.930e-4862.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7K1_9PHAE3.720e-4434.92RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJQ9_ECTSI3.120e-3855.03Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FTW2_ECTSI1.220e-3031.07RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22181contigH-paniculata_contig22181:337..3757 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons8
Model size1068
Cds size1068
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22181.5886.1prot_H-paniculata_contig22181.5886.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig22181 337..3757 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929612.2817488-CDS-H-paniculata_contig22181:336..4811622929612.2817488-CDS-H-paniculata_contig22181:336..481Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 337..481 -
1691480935.4520085-CDS-H-paniculata_contig22181:336..4811691480935.4520085-CDS-H-paniculata_contig22181:336..481Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 337..481 -
1622929612.293997-CDS-H-paniculata_contig22181:1076..14571622929612.293997-CDS-H-paniculata_contig22181:1076..1457Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 1077..1457 -
1691480935.462388-CDS-H-paniculata_contig22181:1076..14571691480935.462388-CDS-H-paniculata_contig22181:1076..1457Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 1077..1457 -
1622929612.3072793-CDS-H-paniculata_contig22181:1728..18241622929612.3072793-CDS-H-paniculata_contig22181:1728..1824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 1729..1824 -
1691480935.4725175-CDS-H-paniculata_contig22181:1728..18241691480935.4725175-CDS-H-paniculata_contig22181:1728..1824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 1729..1824 -
1622929612.3179653-CDS-H-paniculata_contig22181:2022..21211622929612.3179653-CDS-H-paniculata_contig22181:2022..2121Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 2023..2121 -
1691480935.4826436-CDS-H-paniculata_contig22181:2022..21211691480935.4826436-CDS-H-paniculata_contig22181:2022..2121Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 2023..2121 -
1622929612.327832-CDS-H-paniculata_contig22181:2275..23781622929612.327832-CDS-H-paniculata_contig22181:2275..2378Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 2276..2378 -
1691480935.4916663-CDS-H-paniculata_contig22181:2275..23781691480935.4916663-CDS-H-paniculata_contig22181:2275..2378Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 2276..2378 -
1622929612.9020672-CDS-H-paniculata_contig22181:2652..27231622929612.9020672-CDS-H-paniculata_contig22181:2652..2723Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 2653..2723 -
1691480935.501377-CDS-H-paniculata_contig22181:2652..27231691480935.501377-CDS-H-paniculata_contig22181:2652..2723Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 2653..2723 -
1622929612.917184-CDS-H-paniculata_contig22181:3222..33091622929612.917184-CDS-H-paniculata_contig22181:3222..3309Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 3223..3309 -
1691480935.5108893-CDS-H-paniculata_contig22181:3222..33091691480935.5108893-CDS-H-paniculata_contig22181:3222..3309Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 3223..3309 -
1622929612.953561-CDS-H-paniculata_contig22181:3671..37571622929612.953561-CDS-H-paniculata_contig22181:3671..3757Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 3672..3757 -
1691480935.5199199-CDS-H-paniculata_contig22181:3671..37571691480935.5199199-CDS-H-paniculata_contig22181:3671..3757Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22181 3672..3757 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig22181.5886.1

>prot_H-paniculata_contig22181.5886.1 ID=prot_H-paniculata_contig22181.5886.1|Name=mRNA_H-paniculata_contig22181.5886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=356bp
ERNYLYVLLVAGFAILAIPIYHEYTLDPWEIIPKQTDMLALASIVLACIL
MAIYPFIRKVDDIFSISKELTIVTVALLVLAVGGKLVDKYGDDDLIRWIG
PTNLFFFVTAFIFGVSVVDPLRRLAFDPLAGFKRKHVGRVLLNRRDVRTS
MGKICVRHSAVAGGKRDFVSCDRLSPLSLRETARCESEDEGRPASVTSQV
DEGVIGGSGNGDGGTNGRESTALGGTAVVTSSLRNPANYGPFITTIHPNS
NSNHYSRNNFWTGREEGAGEVWSFERVASTPLLAVAFEEFSRKALCHESV
LFLSEVSRYESLDYSVADSPLSAPSQYNDVTQFDALCRLAHTFVRTGARE
EINIR*
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mRNA from alignment at H-paniculata_contig22181:337..3757-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig22181.5886.1 ID=mRNA_H-paniculata_contig22181.5886.1|Name=mRNA_H-paniculata_contig22181.5886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3421bp|location=Sequence derived from alignment at H-paniculata_contig22181:337..3757- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAACGAAACTATCTCTATGTCTTGCTGGTGGCGGGCTTTGCTATACTCGC CATCCCGATTTACCATGAGTATACCTTGGATCCATGGTGAGAATCGCGGG CGGAGGGGGTAGGGGGCAAGGGAGGGGGGGGGGGGGGCAGGTGCATGTAG GGCGAACGAACTAGAAACGTTTTTTGTCGTGTTTGAGGTGGATTTGTGTG AGGATATCACCCCACCCACCAACTCTATGTTTTCCTATTTGTCTTTTATA CCACGCCTACAATTTGTCTTCCGGCAATATGCAGACTCGAGTATGGGGTG CGGCGATTGAGAAACATCGAAACGAAGCGAAATCAAATTATTGAGATTTG CCGTGTCTGGTGTATTGTAACGATCGATTAAATAACTCGAAACAGTATTT TGGCCCTCTACTTTTGGCTTCGTGTGTGTGCGTTCGTTTGTTCGTCAGGG AAATAATCCCGAAGCAGACCGACATGTTGGCGCTGGCATCCATCGTGTTG GCATGCATTCTCATGGCTATCTACCCCTTCATCAGGTAAAGACAACATGT GCCGTGTGTTATGGTGGCGTATTAAACAATTTATGATTGACCACATGAAC GGTCGCTGATAATCTTTTTGTTTTTAACGACCCAATGAAATGTGTTGTAT CGCGACAATCACGTCGGTCGTTGATTTCATAGTAAATACTACTCTTCGTC GCTTTCAAAGCGCGTTCGACATCTGATTCAAGTTGGGGATGACCCGTGAC CTGGCCTACTGTCAATCGCGAACTCCTGACAATCCAACATTTATCTTCAG TCCGTAATTACCCGTTCCCGGGAAAGCAATTGTCAGCATGATGAAGTTCA ACTTGCGCAACTGCCTATACCCCCACCCCCACAACCAGTCTCTTGGCCTA CTCTCAACAATACCCACGCCAGAAGATGGATTTGATTGTCGTCTTTTGTT GTCGCTCTCAACTACTGATGTTGGTGCGTGTATCTTTTGCCTTATACAAA TATTTATGTGTATATGTGTACACCAACCCAACAGGAAAGTGGATGATATT TTCAGCATCAGCAAGGAGCTCACCATCGTCACCGTCGCCCTCCTCGTTCT CGCCGGTATGTTGCATCAATCGTAGATTGGAAAACAACGAAATATGAAGT GAAATATAACTTAAAACGTACCTCCTGAAACCTAGCATTTTCTCGAGCTA CACCTAGTGTAGGGGAGGAGGTCGACCGGGAGACGGGTGGAGAGGTCCTG GAAGATGCAACCACAAACATTTTCGATCAGTGGTCATAGTGCATCGTTCG CTTGGAAACCAGCATTCACACTTTGCACGTCCTTTTCTTGCCACCGCGTC CCCCCTGCCGTCCCTACTCGAACCCTCAGTCGGAGGAAAGCTTGTAGACA AGTACGGAGATGACGATTTGATTCGGTGGATAGGCCCGACCAATCTCTTC TTCTTCGTCACAGCCTTCATATTTGGAGTTAGGTAAGGAAACCGCGCCAC GGGACCATGGGCAGGACGCTCCCCCTCATTCTCGGTTGGTGCCGATGAAA AAATATCCATCTTCCCTTCGAACAATCAACTGATGGGTCCTACCCCTCCC CCCCCCCTTCCCAACTCCTCGCACGTCCATCTCTAGCGTGGTGGATCCGC TACGTCGTTTGGCTTTTGATCCTTTGGCCGGATTCAAGCGCAAGCACGTT GGCAGGGTGCTGCTAAATCGTCGAGATGTTCGAACGTGAGTGCATTGGTG GTAGAGGCGCTTGACCCTGTAAGTTGAAGTGTAGCGCGGTCCTACGTACT CCGGATAACCTCGTCGTACAACTACCCTTAGACCTTGCCCCTTGCTGGCT GAAGCGATTCGAGGTGGGGTGACAACTTCGATACGAAGGCAAGGCTCCGT TTTCGTGGTGTTGATTGTACGCCCTACTTGTAGCTCAATGGGTAAAATAT GTGTTCGTCACTCTGCCGTCGCGGGAGGCAAACGTGATTTTGTTTCATGT GATCGTTTATCTCCGCTCTCCTTGCGAGAGTTAGGCCCGATTGGATTATC ATGCCTCCTTCCGCACACCGCGCCATGATACATTGGGTGTCGGTACGCTA TCCAAAACAAGGTGGACTGATTCTCCAACTAGCTGAACAGGCAACACTTG ATTTTTACTGTGGTAAAATTCTCACGCCCAACCTCACTTGCCACCCTCTT TTGCCCCGCGCCCCCCCTGTACCCTCCTTCCCCAAAACATTTGCGCGTAT CTTCACGACAAACTTATGGGAAAAACAACAACCTAAAAAAAACAACAAAG AACGGCGCGATGTGAGAGCGAGGATGAAGGGCGTCCGGCGAGCGTTACAA GCCAAGTGGATGAAGGCGTTATCGGTGGCAGCGGCAACGGCGACGGCGGC ACTAACGGGCGCGAATCAACCGCCCTCGGGGGTACCGCAGTGGTTACTTC TTCATTACGCAACCCAGCCAATTATGGTCCTTTCATCACCACCATCCACC CCAACTCCAATAGCAACCATTACTCTCGCAATAACTTCTGGACTGGGCGG GAGGAGGGCGCCGGGGAAGTGTGGAGCTTCGAGAGGGTGGCTTCCACGCC GCTATTGGCCGTCGCATTCGAGGAATTTTCTCGCAAAGCTCTGTGCCACG AGTCGGTCCTCTTTCTCAGCGAGGTTTCTCGGTGGGTGGAAGCTCCTTAT TTTTCCGCTGTGTTCCTTCTGTGTGCATGCAGGATTTTGTTGTGTCTTTT CTTGTCCGTGGAGATGTTGTGAAATTGTGACCATCTGTGGAATATTTACT GTTTCGTTTCGGGGGACTTTCTAGGGCGGGGTAGACACGGCATTTCGGTG AAAATGCCACTATCACCCCCTGGATGCTCTCGGCCCACATATGATTTTCG GATATCCCCACATATGTTTCAAGTTGTGCTTCCTATGTTTTAAGGTATTG TCATCGAAGCGAACTTGAACACACTGGTCTGGCGGAAAACAGACCCCGTG CGGCGGTATGCTTTGGCTTAGGTAAAGGTTCCAAGGAGATGGGGAATGTT ATATTTGATCGCATAGAAGATATCGAGTGGTGTGTTCGAGGGAATCATCC CTCGGGTGACGTGCAGGGATCGCGTTTTGCGGTCCGGAATCCCAGGAACC TCAACAAAGTTTTTCTCCACACATACTCGAGTACATGCGTTCCTGTGGGC AGACACAGAGGAAACGCTCGCTCCATACACTCCTCTCTTGTTGTGATGCT TTCATTTTTGTTTTTGCGTGACACAGATACGAGAGCTTGGATTACTCGGT TGCCGATTCACCCCTGTCCGCACCAAGCCAATACAACGATGTGACCCAAT TCGACGCCTTGTGTCGCCTGGCGCACACTTTCGTCCGGACCGGTGCTCGC GAAGAGATCAACATAAGGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig22181:337..3757-

>mRNA_H-paniculata_contig22181.5886.1 ID=mRNA_H-paniculata_contig22181.5886.1|Name=mRNA_H-paniculata_contig22181.5886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2136bp|location=Sequence derived from alignment at H-paniculata_contig22181:337..3757- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAACGAAACTATCTCTATGTCTTGCTGGTGGCGGGCTTTGCTATACTCGC
CATCCCGATTTACCATGAGTATACCTTGGATCCATGGAACGAAACTATCT
CTATGTCTTGCTGGTGGCGGGCTTTGCTATACTCGCCATCCCGATTTACC
ATGAGTATACCTTGGATCCATGGGAAATAATCCCGAAGCAGACCGACATG
TTGGCGCTGGCATCCATCGTGTTGGCATGCATTCTCATGGCTATCTACCC
CTTCATCAGGGAAATAATCCCGAAGCAGACCGACATGTTGGCGCTGGCAT
CCATCGTGTTGGCATGCATTCTCATGGCTATCTACCCCTTCATCAGGAAA
GTGGATGATATTTTCAGCATCAGCAAGGAGCTCACCATCGTCACCGTCGC
CCTCCTCGTTCTCGCCGGAAAGTGGATGATATTTTCAGCATCAGCAAGGA
GCTCACCATCGTCACCGTCGCCCTCCTCGTTCTCGCCGTCGGAGGAAAGC
TTGTAGACAAGTACGGAGATGACGATTTGATTCGGTGGATAGGCCCGACC
AATCTCTTCTTCTTCGTCACAGCCTTCATATTTGGAGTTAGTCGGAGGAA
AGCTTGTAGACAAGTACGGAGATGACGATTTGATTCGGTGGATAGGCCCG
ACCAATCTCTTCTTCTTCGTCACAGCCTTCATATTTGGAGTTAGCGTGGT
GGATCCGCTACGTCGTTTGGCTTTTGATCCTTTGGCCGGATTCAAGCGCA
AGCACGTTGGCAGGGTGCTGCTAAATCGTCGAGATGTTCGAACCGTGGTG
GATCCGCTACGTCGTTTGGCTTTTGATCCTTTGGCCGGATTCAAGCGCAA
GCACGTTGGCAGGGTGCTGCTAAATCGTCGAGATGTTCGAACCTCAATGG
GTAAAATATGTGTTCGTCACTCTGCCGTCGCGGGAGGCAAACGTGATTTT
GTTTCATGTGATCGTTTATCTCCGCTCTCCTTGCGAGACTCAATGGGTAA
AATATGTGTTCGTCACTCTGCCGTCGCGGGAGGCAAACGTGATTTTGTTT
CATGTGATCGTTTATCTCCGCTCTCCTTGCGAGAAACGGCGCGATGTGAG
AGCGAGGATGAAGGGCGTCCGGCGAGCGTTACAAGCCAAGTGGATGAAGG
CGTTATCGGTGGCAGCGGCAACGGCGACGGCGGCACTAACGGGCGCGAAT
CAACCGCCCTCGGGGGTACCGCAGTGGTTACTTCTTCATTACGCAACCCA
GCCAATTATGGTCCTTTCATCACCACCATCCACCCCAACTCCAATAGCAA
CCATTACTCTCGCAATAACTTCTGGACTGGGCGGGAGGAGGGCGCCGGGG
AAGTGTGGAGCTTCGAGAGGGTGGCTTCCACGCCGCTATTGGCCGTCGCA
TTCGAGGAATTTTCTCGCAAAGCTCTGTGCCACGAGTCGGTCCTCTTTCT
CAGCGAGGTTTCTCGAACGGCGCGATGTGAGAGCGAGGATGAAGGGCGTC
CGGCGAGCGTTACAAGCCAAGTGGATGAAGGCGTTATCGGTGGCAGCGGC
AACGGCGACGGCGGCACTAACGGGCGCGAATCAACCGCCCTCGGGGGTAC
CGCAGTGGTTACTTCTTCATTACGCAACCCAGCCAATTATGGTCCTTTCA
TCACCACCATCCACCCCAACTCCAATAGCAACCATTACTCTCGCAATAAC
TTCTGGACTGGGCGGGAGGAGGGCGCCGGGGAAGTGTGGAGCTTCGAGAG
GGTGGCTTCCACGCCGCTATTGGCCGTCGCATTCGAGGAATTTTCTCGCA
AAGCTCTGTGCCACGAGTCGGTCCTCTTTCTCAGCGAGGTTTCTCGATAC
GAGAGCTTGGATTACTCGGTTGCCGATTCACCCCTGTCCGCACCAAGCCA
ATACAACGATGTGACCCAATTCGACGCCTTGTGTCGCCTGGCGCACACTT
TCGTCCGGACCGGTGCTCGCGAAGAGATCAACATAAGGTGAATACGAGAG
CTTGGATTACTCGGTTGCCGATTCACCCCTGTCCGCACCAAGCCAATACA
ACGATGTGACCCAATTCGACGCCTTGTGTCGCCTGGCGCACACTTTCGTC
CGGACCGGTGCTCGCGAAGAGATCAACATAAGGTGA
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