mRNA_H-paniculata_contig22.5813.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig22.5813.1
Unique NamemRNA_H-paniculata_contig22.5813.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A6H5K9Y9_9PHAE (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Y9_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 7.520e-78
Identity = 189/406 (46.55%), Postives = 236/406 (58.13%), Query Frame = 1
Query:  478 TRAPRMYLGGLGHALHVDQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGS----------------GRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLI-AIEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQF--ALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWAS 1638
            TRAPR+YL G    LHV Q V+L+ +Q  Y+V+VMRLRDG+ VRVFDG++GEFLA V+  +ST S                GR G+GKR S +G  + VE    LR+E LTR+QPG     I   G  E+   +   AP++ L+FAPIRKQRLK+LVEKAVE+GASRL PVLT RT+K    D+S   L +L  + A+EAAEQCERM VP V S P+ L S L                + SS  L+S   + G+A               +D  GDL+                    LP ++FVCKER  +APPLL+AL ++  A   ER Q   NSS D +  +N     A  +GPEGGF P+EI A+A   FVRFVSLG TVLRAETAA+YALS WSAFWAS
Sbjct:  141 TRAPRVYLNGAN--LHVGQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSSSTSSSSRLERSGEKIGSGRGGRRGRGKR-STVGADKVVE----LRVECLTRRQPG-----IGGGGDGEV---EDVDAPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGAVSDAS--MLDRLGAVTAVEAAEQCERMTVPPVAS-PVTLASYLRS-----------LELRQSSCDLSS---IIGLA---------------RDRGGDLS--------------------LPDIVFVCKERDVDAPPLLEALAEYEQAFSEERRQDHVNSS-DGSRNANA----AFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYALSSWSAFWAS 474          
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: D7G8G1_ECTSI (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G1_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 4.100e-68
Identity = 164/371 (44.20%), Postives = 208/371 (56.06%), Query Frame = 1
Query:  580 MRLRDGNHVRVFDGISGEFLATVSGVASTGS--------------GRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLI-AIEAAEQCERMIVPRVESTPMPLVSLLNEWP-KHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQF--ALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWAS 1638
            MRLRDGN VRVFDG++GEFLA V+  +S+ S              GR G+GKR +G       EK + LR+E LTR+QPG     I   G  E+   +   AP++ L+FAPIRKQRLK+LVEKAVE+GASRL PVLT RT+K    D+S   L +L  + A+EAAEQCERM VP + S P+ L S L     +H    G+                + G+A               +D  G                    D  LP ++FVCKER  +APPLL+AL ++  A   +R Q   NSS+DN + +     +A  +GPEGGF P+EI  +A   FVRFVSLG TVLRAETAA+YALS WSAFWAS
Sbjct:    1 MRLRDGNPVRVFDGVNGEFLAAVATSSSSSSRLERSGEKIGSGRGGRRGRGKRSAG-----GAEKVIELRVECLTRRQPG-----IGGGGGGEV---EDLDAPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGAVSDAS--MLDRLGAVTAVEAAEQCERMTVPPMAS-PVTLASYLRSLELRHSSCDGS---------------SIVGLA---------------RDRDG--------------------DRSLPDIVFVCKERDVDAPPLLEALAEYEQAFSEQRRQDHVNSSDDNRNAN-----AAFLIGPEGGFDPDEIGTLAQYPFVRFVSLGRTVLRAETAAVYALSSWSAFWAS 300          
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A835ZHN8_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHN8_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.210e-32
Identity = 117/355 (32.96%), Postives = 164/355 (46.20%), Query Frame = 1
Query:  580 MRLRDGNHVRVFDGISGEFLATVSGVASTGSGRN-GKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKS-GAEDSSEGSLKKLRLIAIEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWAS 1638
            MRLRDG+ VR F+G  GE+L T+S    + S +  GKG+R        + +  +AL++E   R Q   S   +                 DV L+ API++QR+K+LVEKA E+G + + PVLT  T+++  AE +S     +L  IAIEAAEQCER+ +P +   P PL  LL  W  H + H                                                             T   QL    FVC+ER+  +PPLL+AL   +  R                 +    +A  VGPEGGF+ +E   +A   +++ VSLG TVLRAETAA+YALSC+S+F A+
Sbjct:    1 MRLRDGSTVRAFNGRDGEYLCTLSQTDGSSSSKPAGKGRR--------SAKPALALQVEQQLRSQAEDSCADL-----------------DVWLLCAPIKRQRMKLLVEKATELGVTCIAPVLTAHTQEALDAEGTS-----RLLPIAIEAAEQCERLSLPHLHP-PAPLPELLARW--HSEPH-------------------------------------------------------------TRARQL----FVCQERSPQSPPLLEALAAASAAR--------------GVPSSAAPAAFLVGPEGGFSADEREMLAGLPWIQGVSLGATVLRAETAALYALSCYSSFAAA 243          
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A2E4XSR1_9PROT (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XSR1_9PROT)

HSP 1 Score: 120 bits (300), Expect = 6.210e-27
Identity = 111/380 (29.21%), Postives = 155/380 (40.79%), Query Frame = 1
Query:  517 ALHVDQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTR-KSGAEDSSEGSLKKLRLIAIEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWASTDRPP 1653
            AL   + V+LS +Q HY+ +V+RL  G  V +F+G  GE+ A +  +           +R +G           +L +E   R Q                      + PD+ L+FAPI++ RL +LV+KAVE+G SRL+PVLT RT  K    D    +L       IEAAEQCERM +P +   P P++ +L+++P                                                     G +                    + VC ER  +A P+   LE    E +R                     AI  GPEGGFA  E+ A    SF+RFVSLGP +LRAETAA+ A++CW A      R P
Sbjct:   16 ALDAGRSVDLSANQSHYLKHVLRLGPGAEVALFNGKDGEWRARIETI-----------RRNAG-----------SLGVETQIRPQ---------------------ITEPDLWLLFAPIKRARLDMLVQKAVELGVSRLVPVLTERTEVKRLNADRHRSNL-------IEAAEQCERMTLPEIVE-PRPILDVLSDFP----------------------------------------------------TGRR--------------------LLVCAERG-HAAPINQILEDDTGEADR--------------------CAILCGPEGGFAETELDAFQKLSFIRFVSLGPRILRAETAAISAVTCWQAALGDWRRRP 251          
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: UPI0010745A2F (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Terasakiella sp. SH-1 TaxID=2560057 RepID=UPI0010745A2F)

HSP 1 Score: 117 bits (293), Expect = 5.050e-26
Identity = 107/382 (28.01%), Postives = 151/382 (39.53%), Query Frame = 1
Query:  517 ALHVDQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLIA--IEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWASTDRPPR 1656
            +L V    +LS DQ HY+ NVMRL+ G+ V VF+G  GE+L  +S                       A +K   +++    R+Q                      S PD+ML+FAPI+KQRL  ++EKA E+G S   PV+T RT  S         ++  RL A  IEA+EQCER+ +P V    + LV L+ +WP+                                                                           +FV  E    A P+L+ L++FA +                    I   AI VGPEGGF P E+  +A    V  +S+GP +LRA+TAA+ A+SCW +       P R
Sbjct:    9 SLSVGLSQDLSSDQAHYVNNVMRLKVGDEVAVFNGQDGEWLGQISS----------------------ARKKNCTIQLIEKIREQD---------------------SCPDLMLVFAPIKKQRLDFIMEKATELGVSDFQPVITQRTIAS--------KIRSDRLCAQTIEASEQCERLNIPVVHEA-VSLVQLVKDWPQE------------------------------------------------------------------------RTLFVLNEHGG-AKPILEGLQEFAGKE-------------------IGPCAILVGPEGGFDPSELDLLAKLQNVVPLSIGPRILRADTAALAAISCWQSVLGDWQVPLR 246          
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A2E7V032_9RICK (Ribosomal RNA small subunit methyltransferase E n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7V032_9RICK)

HSP 1 Score: 116 bits (291), Expect = 1.130e-25
Identity = 107/389 (27.51%), Postives = 150/389 (38.56%), Query Frame = 1
Query:  505 GLGHALHVDQ------IVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLIAIEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWASTDRPP 1653
            G+   LHVDQ       + LS +Q HY+ NV+RL     V +F+G  GE+LA +                       R  ++ ++L +  L R Q                     A  P++ LMFAPI++ RL I+V+KAVE+G SRLIP+ T RT      +    +L + R   +EAAEQCER+ +P +   P  +  +L  +P                             D C                                            I VC ER  +A P+   L++      R                     AI  GPEGGF+  E+ A    SF+RFVSLGP +LRAETA + A++CW        R P
Sbjct:    6 GVRARLHVDQELDTGQFINLSGNQSHYLKNVLRLAPDAEVALFNGKDGEWLARID----------------------RVSQRSISLEVRRLLRAQ---------------------AVEPELWLMFAPIKRARLDIIVQKAVELGVSRLIPIFTERT------EVKRLNLVRHRANIVEAAEQCERLTLPEIVE-PRAIFDVLANFP----------------------------GDGC--------------------------------------------ILVCVERG-DADPIHKVLQEDLASVGRF--------------------AILCGPEGGFSDTELDAFGKLSFIRFVSLGPRILRAETAVISAVTCWQVTLGDWRRRP 251          
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A1C3RIS7_9PROT (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Candidatus Terasakiella magnetica TaxID=1867952 RepID=A0A1C3RIS7_9PROT)

HSP 1 Score: 114 bits (284), Expect = 8.940e-25
Identity = 103/377 (27.32%), Postives = 148/377 (39.26%), Query Frame = 1
Query:  529 DQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLIAIEAAEQCERMIVPRV-ESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWASTDRPPR 1656
            D ++EL  DQ HY+ NVMRL+ G+ + +F+G  GE+ AT++                      +A +K   L++   TR+Q                      S PD+ML+FAPI+KQRL  ++EKA E+G SR  PV+T RT  S           +L    IEA+EQCER+ +P V E+  +P   L+ +W K                                                D T+                        FV  E   + P +L+ L+QF                           A  VGPEGGF P E+  +     V  +S+GP +LRA+TAA+ A+SCW +       P R
Sbjct:   16 DGLIELPSDQAHYVNNVMRLKVGDKLALFNGREGEWSATIT----------------------QARKKNCTLQVGKKTRQQE---------------------SCPDLMLVFAPIKKQRLDFIMEKATELGVSRFQPVITKRTIVSKIRTD------RLHAQTIEASEQCERLNIPEVLEAVSLP--QLIQDWSK------------------------------------------------DRTL------------------------FVLNEHGGSKP-ILEGLQQFV-------------------GKSCGPCAFLVGPEGGFDPSELDLLEKLQNVVPLSVGPRILRADTAALAAISCWQSVLGDWQAPLR 249          
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A2Z4UFE5_9HYPH (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2Z4UFE5_9HYPH)

HSP 1 Score: 112 bits (281), Expect = 3.240e-24
Identity = 107/370 (28.92%), Postives = 155/370 (41.89%), Query Frame = 1
Query:  505 GLGHALHVDQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLIAIEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALS 1614
            GLG  L V      ++DQ+HY++NVMRL DG+HVR+F+G  GE+L  +  V           K+RS +           + +E  TR+Q                        PD+ L+FAP+++ RL  +V+KAVE+GA RL+PV T RT  +  +        +LR  A+EAAEQC  + VP VE  P  L +LLN+W                SA +                                  G + +  D+A   A+  EQL  ++       A+A PL                                  AI +GPEGGF+P E   +        +SLGP ++RA+TAA+ AL+
Sbjct:   33 GLGEGLGVVP----NRDQIHYLLNVMRLSDGDHVRLFNGRDGEWLGRLDEV-----------KKRSCL-----------IALEKKTREQD---------------------VLPDIWLLFAPVKRARLDFMVQKAVEMGAGRLLPVNTARTNVARIKQD------RLRANAVEAAEQCGLLSVPEVEE-PQSLGALLNDW----------------SADMG---------------------------------GRRIIFCDEAAPKASTLEQLQNLVGA----GASAGPL----------------------------------AILIGPEGGFSPAEREQLLNRDDTHAISLGPRIMRADTAAVAALA 261          
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A7Y7D3H1_9HYPH (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Methylocystaceae bacterium TaxID=2052174 RepID=A0A7Y7D3H1_9HYPH)

HSP 1 Score: 112 bits (279), Expect = 3.860e-24
Identity = 99/381 (25.98%), Postives = 143/381 (37.53%), Query Frame = 1
Query:  529 DQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLIAIEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWASTDRPPR*HLGD 1671
            D+ +ELS DQ HYI NVMRL  G+ V +F+ + GE+ AT+                        + +K+  L++   TR                      T   PD+ L FAPI+KQRL  ++EKA E+G S L PV+T  T  S           +L   AIEA+EQCER+ +P V+   + L  L+ +WP++ +                                                                        +FV  ER    P     ++Q     +   H                  A   GPEGGF   E+  +    FV  +SLGP +LRA+TAA+ A+SCW +      +P R   G+
Sbjct:   16 DKQIELSSDQAHYINNVMRLNVGDEVLLFNALDGEWAATIQ----------------------ESKKKRCVLQVGSKTR---------------------DTEKMPDLWLCFAPIKKQRLDFIIEKATELGVSCLQPVITRHTIVSKIRTD------RLHAQAIEASEQCERLNIPDVKEA-VSLTQLIKDWPENRR------------------------------------------------------------------------LFVLDERGGAEP-----IDQALRTHKDGPH------------------AFLTGPEGGFEASELDLLRKLPFVTPISLGPRILRADTAALAAISCWQSVCGDWQKPLRNRFGE 251          
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Match: A0A516H2H2_9PROT (Ribosomal RNA small subunit methyltransferase E n=2 Tax=Ferrovibrio terrae TaxID=2594003 RepID=A0A516H2H2_9PROT)

HSP 1 Score: 110 bits (275), Expect = 1.040e-23
Identity = 109/366 (29.78%), Postives = 148/366 (40.44%), Query Frame = 1
Query:  517 ALHVDQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISGEFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGSSAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASRLIPVLTTRTRKSGAEDSSEGSLKKLRLIAIEAAEQCERMIVPRVESTPMPLVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNNDSYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLLDALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITAMAACSFVRFVSLGPTVLRAETAAMYALS 1614
            AL     V L  DQ HY+ +V+RL+ G  V +F+G  GEF A ++                       A +K V L +    R QP S+A                    DV L FAPI++ R++++VEKA E+ A RL+PV+T RT+          + ++L   A EAAEQCER+ VP V +  + L  LL +WP+                                                                    D QL    F+C ER+ +AP LL A +                             A+ VGPEGGFAPEE+  +AA S V  VSLGP +LRAETAA+ AL+
Sbjct:   14 ALSAGGSVMLPDDQAHYLRHVLRLQPGEAVALFNGRDGEFRAVIA----------------------EAGKKGVRLDLAAQLRPQPASTA--------------------DVWLCFAPIKQGRIEMIVEKATELDAGRLLPVITRRTQMQKV------NAERLAAHAREAAEQCERLDVPEV-APAVTLEKLLQDWPQ--------------------------------------------------------------------DRQL----FLCAERS-DAPSLLAAAKGRGP------------------------CALLVGPEGGFAPEELDRLAALSQVVTVSLGPRILRAETAAIAALA 233          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig22.5813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9Y9_9PHAE7.520e-7846.5516S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
D7G8G1_ECTSI4.100e-6844.2016S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A835ZHN8_9STRA1.210e-3232.9616S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A2E4XSR1_9PROT6.210e-2729.21Ribosomal RNA small subunit methyltransferase E n=... [more]
UPI0010745A2F5.050e-2628.0116S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A2E7V032_9RICK1.130e-2527.51Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A1C3RIS7_9PROT8.940e-2527.32Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A2Z4UFE5_9HYPH3.240e-2428.92Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A7Y7D3H1_9HYPH3.860e-2425.98Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A516H2H2_9PROT1.040e-2329.78Ribosomal RNA small subunit methyltransferase E n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig22contigH-paniculata_contig22:14774..17596 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score235.3
Seed ortholog evalue5.3e-59
Seed eggNOG ortholog2880.D7G8G1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.RNA methyltransferase
EggNOG OGs2SA8N@2759,COG1385@1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1785
Cds size1329
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig22.5813.1prot_H-paniculata_contig22.5813.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig22 15104..17470 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929602.258572-UTR-H-paniculata_contig22:14773..151031622929602.258572-UTR-H-paniculata_contig22:14773..15103Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22 14774..15103 +
1691480931.3229225-UTR-H-paniculata_contig22:14773..151031691480931.3229225-UTR-H-paniculata_contig22:14773..15103Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22 14774..15103 +
1622929602.3075123-UTR-H-paniculata_contig22:17470..175961622929602.3075123-UTR-H-paniculata_contig22:17470..17596Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22 17471..17596 +
1691480931.3615978-UTR-H-paniculata_contig22:17470..175961691480931.3615978-UTR-H-paniculata_contig22:17470..17596Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig22 17471..17596 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929602.2743454-CDS-H-paniculata_contig22:15103..151241622929602.2743454-CDS-H-paniculata_contig22:15103..15124Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22 15104..15124 +
1691480931.3344624-CDS-H-paniculata_contig22:15103..151241691480931.3344624-CDS-H-paniculata_contig22:15103..15124Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22 15104..15124 +
1622929602.293071-CDS-H-paniculata_contig22:16162..174701622929602.293071-CDS-H-paniculata_contig22:16162..17470Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22 16163..17470 +
1691480931.3520353-CDS-H-paniculata_contig22:16162..174701691480931.3520353-CDS-H-paniculata_contig22:16162..17470Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig22 16163..17470 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig22.5813.1

>prot_H-paniculata_contig22.5813.1 ID=prot_H-paniculata_contig22.5813.1|Name=mRNA_H-paniculata_contig22.5813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=443bp
MRYVDNHLHQQAESSGDYPEEFLPKKKRPSPFLGLDIADSEHSSNCGVET
RAPRMYLGGLGHALHVDQIVELSQDQVHYIVNVMRLRDGNHVRVFDGISG
EFLATVSGVASTGSGRNGKGKRRSGIGGGRAVEKKVALRMEHLTRKQPGS
SAFGIAAHGFAEMGGQQTASAPDVMLMFAPIRKQRLKILVEKAVEIGASR
LIPVLTTRTRKSGAEDSSEGSLKKLRLIAIEAAEQCERMIVPRVESTPMP
LVSLLNEWPKHIKRHGNYTTKKSSSATLASSEHVAGVADACNVSDSKNND
SYEKDEQGDLTVGEKRVAEDQATTTATLDEQLPTVIFVCKERAANAPPLL
DALEQFALERERHQHLSNSSNDNTSYSNIIYSSAIFVGPEGGFAPEEITA
MAACSFVRFVSLGPTVLRAETAAMYALSCWSAFWASTDRPPR*
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mRNA from alignment at H-paniculata_contig22:14774..17596+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig22.5813.1 ID=mRNA_H-paniculata_contig22.5813.1|Name=mRNA_H-paniculata_contig22.5813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2823bp|location=Sequence derived from alignment at H-paniculata_contig22:14774..17596+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTTGGCTAATAATCCGTTGAAAAATTAACCTCCGAAGGCTCTCCAAGGC CAAGCTGGCGTCCCGAAAGAACGAGCGAAAATGTACAAAAACAAAGGGCA CCCACCGCCTGTCGTTGCTTTTCTTCATCGTGGGGCTAATAGTATGGGAA AATTCCGTCGTCGCTCTCTGCCGCCTTGTCGCGTCGCTAGCTCAGCACCA GCAGGTTCACTTCGAAACGGAGTACTGTGTTGCACCTTTACCATCGTGTC CGGGCAGATTGCTTCGGTGTATCAAGTTTAGGAACGTGGGCGCACGAGCT GCACTTGGGCAACAACCACGACGACGGCGGATGCGCTACGTTGACAACCA CGTATGTCTTTCCATACACTCACGTGCCTCTTCAATCATTTCTGCAATTG ATAGTCCGGATACTGTATCCCGATGGGTTTTTTTTTATCTATGCTAGTTC ATGACAACTCTATTTCTGCAGATTGTTACTTTTAGGTGATATTCTCACCC TTGAAAACAAGAGTTCGCCGCCACCGGGTCGGCTACGGGCGGTTCAGCGG ACTTGAAATGTTTGTGCAGTGCGGGATCGAATACCATGCCAAGTGCGCAA GTGTCAAGGACGATGAACCAATATTTTTATTAGAGATGAACAAACCATAC GTCAACACTCCAGAGAGAGCACTGCGCCATTTGGCTGTTTGTGTTGAAGC AGTGACATTCAAGATGGGCGACAATATCCGACTTACACCCGCCTGGAAGA TGGCTCTCGTCGTTGTTTAAACCCATGTATAGGGTCGGAGAGTATGCAAA TGATATAAGTGTAGGCGTGTGAGCAGCGGCTCTCATTGTAAACATTTATG CAAATAGACGTATCATCGATGCCCCCACCATGGGCGGGTTTCCTACACTA CACACTTTTTCCCGCCTGAACGCTGTGCCCGAGCGCACAACGTGTGTTAC CGACGAAAAACGGGCGAGGGTTGCGCGAAAGTTGCGTCAACCCTACCCCG TATCAACACTGCGCATGCAATGCAATTCTAACGCTGCTTTCTAAACCGTG CCCTCGTATCGTCTCTCGTAGAAACAGAGCTTCAGATGAAACTTATACGC ACGTACAAATGAAAAGATGAAATTATAAGCAGACGACTAAAGTTGTTTAC TTCGCATGTGGCAAATAATTATAAAAGCACGTGCGTTACGTCGCCTATGC AATCGATCGATATCCTGGCATGCTGCATAAAACGCAAGCCCCAAGGTCAA ATGCCGCACACCCTGGAGCCCACTATTATAATTCGGGCTAACGCTACATA CAGTACCATTATCCCGATTTGTGTACAATCCGTGCCAAAATCGGCATGTG TATTAACACCTTCACATCTGTTTCGTCCTTCGTCTGCAGCTCCATCAGCA AGCAGAGAGCAGCGGAGACTACCCGGAGGAGTTTTTACCGAAAAAGAAGC GGCCATCCCCCTTTTTAGGCCTAGATATAGCAGACAGTGAACATTCCAGT AATTGTGGGGTGGAAACCCGCGCACCCCGCATGTACCTCGGCGGCCTTGG ACATGCCTTGCATGTGGATCAGATCGTAGAGCTTTCTCAAGACCAGGTAC ACTACATCGTCAATGTCATGCGCCTGCGAGACGGCAATCATGTCCGCGTG TTCGACGGGATCAGCGGCGAGTTTCTCGCCACCGTCTCCGGTGTAGCAAG TACTGGCAGCGGGCGCAACGGAAAGGGGAAACGAAGGTCGGGCATCGGAG GAGGTCGTGCGGTCGAAAAAAAGGTGGCATTGCGCATGGAGCACCTCACA AGAAAGCAGCCCGGAAGCTCTGCCTTTGGGATAGCAGCTCATGGCTTCGC CGAAATGGGGGGACAACAAACAGCGTCTGCGCCCGATGTAATGCTCATGT TTGCCCCCATCCGGAAACAACGCCTCAAGATACTAGTAGAAAAAGCGGTC GAAATTGGCGCGTCGCGCCTTATTCCCGTGTTGACTACCCGCACGCGTAA GAGCGGCGCGGAAGACTCTTCTGAAGGATCACTAAAAAAATTGCGCCTTA TCGCTATTGAGGCAGCCGAGCAATGTGAGCGGATGATTGTTCCACGCGTC GAGTCCACCCCCATGCCTCTGGTATCGCTTCTAAACGAATGGCCGAAGCA TATCAAAAGACATGGTAACTACACAACTAAAAAAAGCTCCAGCGCAACGC TCGCGTCATCAGAACATGTAGCAGGTGTTGCCGACGCTTGCAACGTCAGT GACAGTAAAAATAACGACAGCTACGAAAAAGACGAACAAGGTGATTTGAC AGTGGGTGAGAAACGGGTTGCGGAGGATCAGGCCACAACAACGGCAACGC TCGATGAACAACTGCCCACTGTTATCTTCGTGTGCAAGGAAAGGGCCGCA AATGCGCCGCCGCTACTGGACGCGCTTGAACAGTTTGCTCTTGAGCGCGA GCGACACCAACATCTTTCCAATAGCAGCAACGACAACACCAGCTACAGCA ATATCATTTATAGCAGTGCTATATTTGTGGGCCCCGAGGGGGGCTTTGCG CCAGAGGAAATCACGGCGATGGCGGCCTGTTCATTTGTGCGTTTCGTCTC CCTTGGACCGACGGTTTTGCGAGCGGAAACGGCCGCCATGTATGCTCTTA GCTGCTGGAGCGCGTTTTGGGCGTCGACCGACCGGCCTCCACGATGACAT TTAGGTGACATTGTGTCGATATCAATACTATTACGCCTTGGTATACGTCG AGAATTCGAAGCGAGGCAGCGACGGTAACAATGCGTTGGTCAAGGAAATG GCACAATTCACAGGAATATATTA
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Coding sequence (CDS) from alignment at H-paniculata_contig22:14774..17596+

>mRNA_H-paniculata_contig22.5813.1 ID=mRNA_H-paniculata_contig22.5813.1|Name=mRNA_H-paniculata_contig22.5813.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2658bp|location=Sequence derived from alignment at H-paniculata_contig22:14774..17596+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGCTACGTTGACAACCACATGCGCTACGTTGACAACCACCTCCATCA
GCAAGCAGAGAGCAGCGGAGACTACCCGGAGGAGTTTTTACCGAAAAAGA
AGCGGCCATCCCCCTTTTTAGGCCTAGATATAGCAGACAGTGAACATTCC
AGTAATTGTGGGGTGGAAACCCGCGCACCCCGCATGTACCTCGGCGGCCT
TGGACATGCCTTGCATGTGGATCAGATCGTAGAGCTTTCTCAAGACCAGG
TACACTACATCGTCAATGTCATGCGCCTGCGAGACGGCAATCATGTCCGC
GTGTTCGACGGGATCAGCGGCGAGTTTCTCGCCACCGTCTCCGGTGTAGC
AAGTACTGGCAGCGGGCGCAACGGAAAGGGGAAACGAAGGTCGGGCATCG
GAGGAGGTCGTGCGGTCGAAAAAAAGGTGGCATTGCGCATGGAGCACCTC
ACAAGAAAGCAGCCCGGAAGCTCTGCCTTTGGGATAGCAGCTCATGGCTT
CGCCGAAATGGGGGGACAACAAACAGCGTCTGCGCCCGATGTAATGCTCA
TGTTTGCCCCCATCCGGAAACAACGCCTCAAGATACTAGTAGAAAAAGCG
GTCGAAATTGGCGCGTCGCGCCTTATTCCCGTGTTGACTACCCGCACGCG
TAAGAGCGGCGCGGAAGACTCTTCTGAAGGATCACTAAAAAAATTGCGCC
TTATCGCTATTGAGGCAGCCGAGCAATGTGAGCGGATGATTGTTCCACGC
GTCGAGTCCACCCCCATGCCTCTGGTATCGCTTCTAAACGAATGGCCGAA
GCATATCAAAAGACATGGTAACTACACAACTAAAAAAAGCTCCAGCGCAA
CGCTCGCGTCATCAGAACATGTAGCAGGTGTTGCCGACGCTTGCAACGTC
AGTGACAGTAAAAATAACGACAGCTACGAAAAAGACGAACAAGGTGATTT
GACAGTGGGTGAGAAACGGGTTGCGGAGGATCAGGCCACAACAACGGCAA
CGCTCGATGAACAACTGCCCACTGTTATCTTCGTGTGCAAGGAAAGGGCC
GCAAATGCGCCGCCGCTACTGGACGCGCTTGAACAGTTTGCTCTTGAGCG
CGAGCGACACCAACATCTTTCCAATAGCAGCAACGACAACACCAGCTACA
GCAATATCATTTATAGCAGTGCTATATTTGTGGGCCCCGAGGGGGGCTTT
GCGCCAGAGGAAATCACGGCGATGGCGGCCTGTTCATTTGTGCGTTTCGT
CTCCCTTGGACCGACGGTTTTGCGAGCGGAAACGGCCGCCATGTATGCTC
TTAGCTGCTGGAGCGCGTTTTGGGCGTCGACCGACCGGCCTCCACGATGA
CTCCATCAGCAAGCAGAGAGCAGCGGAGACTACCCGGAGGAGTTTTTACC
GAAAAAGAAGCGGCCATCCCCCTTTTTAGGCCTAGATATAGCAGACAGTG
AACATTCCAGTAATTGTGGGGTGGAAACCCGCGCACCCCGCATGTACCTC
GGCGGCCTTGGACATGCCTTGCATGTGGATCAGATCGTAGAGCTTTCTCA
AGACCAGGTACACTACATCGTCAATGTCATGCGCCTGCGAGACGGCAATC
ATGTCCGCGTGTTCGACGGGATCAGCGGCGAGTTTCTCGCCACCGTCTCC
GGTGTAGCAAGTACTGGCAGCGGGCGCAACGGAAAGGGGAAACGAAGGTC
GGGCATCGGAGGAGGTCGTGCGGTCGAAAAAAAGGTGGCATTGCGCATGG
AGCACCTCACAAGAAAGCAGCCCGGAAGCTCTGCCTTTGGGATAGCAGCT
CATGGCTTCGCCGAAATGGGGGGACAACAAACAGCGTCTGCGCCCGATGT
AATGCTCATGTTTGCCCCCATCCGGAAACAACGCCTCAAGATACTAGTAG
AAAAAGCGGTCGAAATTGGCGCGTCGCGCCTTATTCCCGTGTTGACTACC
CGCACGCGTAAGAGCGGCGCGGAAGACTCTTCTGAAGGATCACTAAAAAA
ATTGCGCCTTATCGCTATTGAGGCAGCCGAGCAATGTGAGCGGATGATTG
TTCCACGCGTCGAGTCCACCCCCATGCCTCTGGTATCGCTTCTAAACGAA
TGGCCGAAGCATATCAAAAGACATGGTAACTACACAACTAAAAAAAGCTC
CAGCGCAACGCTCGCGTCATCAGAACATGTAGCAGGTGTTGCCGACGCTT
GCAACGTCAGTGACAGTAAAAATAACGACAGCTACGAAAAAGACGAACAA
GGTGATTTGACAGTGGGTGAGAAACGGGTTGCGGAGGATCAGGCCACAAC
AACGGCAACGCTCGATGAACAACTGCCCACTGTTATCTTCGTGTGCAAGG
AAAGGGCCGCAAATGCGCCGCCGCTACTGGACGCGCTTGAACAGTTTGCT
CTTGAGCGCGAGCGACACCAACATCTTTCCAATAGCAGCAACGACAACAC
CAGCTACAGCAATATCATTTATAGCAGTGCTATATTTGTGGGCCCCGAGG
GGGGCTTTGCGCCAGAGGAAATCACGGCGATGGCGGCCTGTTCATTTGTG
CGTTTCGTCTCCCTTGGACCGACGGTTTTGCGAGCGGAAACGGCCGCCAT
GTATGCTCTTAGCTGCTGGAGCGCGTTTTGGGCGTCGACCGACCGGCCTC
CACGATGA
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