prot_H-paniculata_contig109.581.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig109.581.1
Unique Nameprot_H-paniculata_contig109.581.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length499
Homology
BLAST of mRNA_H-paniculata_contig109.581.1 vs. uniprot
Match: D7FLF9_ECTSI (Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF9_ECTSI)

HSP 1 Score: 632 bits (1631), Expect = 1.850e-223
Identity = 342/487 (70.23%), Postives = 381/487 (78.23%), Query Frame = 0
Query:    1 MGIHGLSKLLSDEVPGCMKEVGLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYVFDGKPPQLKGGELEKRKEKRAKAEEDLKNATAAEEKNDVDKFSKRLVRVTRQHNEDCKTLLRLMGVPVVDAPSEAEAQCAALARDGAVYGTATEDMDALTFRTPKLLRRMTFSGASQPIMEIDYQKLLQGLDLTYEKFVDLCILCGCDYTGSVKGIGPKKALNLIRQHGTIEEIIKHLDSSKYPVPDDWLETSERNKKRKAMRLEANCRME----------ARAKNEAKVNKPDAQEAKTDT-SKKQEAGVGEGKYGVAAGDESAKGNDTEGNKDGLXXXXXXXXXXXXXGDSKAKRPREVEGGQDEEEEEDLEEIPPMYRQARGLFLAPDVLPASEYKLKWTDPDEPGLLKFLVEGMGFNAERVASGIEKLKNARKNASQKRMDSFFSAIPNPNAGSK 476
            MGIHGL+KLLSDE P CMKEV LDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCY+FDGKPPQLKGGEL KR  KRAKAE +LK AT A++KNDVDKFSKRLVRVTR HNEDCK LL LMGVPVV APSEAEAQCAALAR+G VYGTATEDMDALTF+TPKLLRRMTFSG++QPI+E+DYQKLLQGL+L++EKFVDLC+LCGCDYTGS+KGIGPKKAL L+RQHGTIEEIIKHLD+ KYPVPDDWLE +ER ++RK                     A   N   V++ D Q+ + D+ S K +A   +  +GV+   E+A                          D  AKR RE E   + E+E  +++ PPMYRQARGLFL P+V PA EYKLKWTDPDEPGL+KFLVE  GFNAERVASGI KLK ARKN SQKRMDSFFS IPNPNAG+K
Sbjct:    1 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDVDKFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDAKKYPVPDDWLEPAERAERRKXXXXXXXXXXXXXXXXXXXXXAETANPEAVSEEDVQQKEGDSDSDKAKADTPD--HGVSVAKEAA--------------------------DVSAKRERETEDAAESEQE--MDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFFSVIPNPNAGAK 457          
BLAST of mRNA_H-paniculata_contig109.581.1 vs. uniprot
Match: A0A835Z748_9STRA (Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z748_9STRA)

HSP 1 Score: 443 bits (1140), Expect = 4.850e-149
Identity = 270/476 (56.72%), Postives = 314/476 (65.97%), Query Frame = 0
Query:    1 MGIHGLSKLLSDEVPGCMKEVGLDSLTGRKVAVDASMAMYQFLIAVRSGGEG-QSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYVFDGKPPQLKGGELEKRKEKRAKAEEDLKNATAAEEKNDVDKFSKRLVRVTRQHNEDCKTLLRLMGVPVVDAPSEAEAQCAALARDGAVYGTATEDMDALTFRTPKLLRRMTFSGASQPIMEIDYQKLLQGLDLTYEKFVDLCILCGCDYTGSVKGIGPKKALNLIRQHGTIEEIIKHLDSSKYPVPDDWLETSERNKKRKAMRLEANCRMEARAKNEAKVNKPDAQEAKTDTSKKQEAGVGEGKYGVAAGDESAKGNDTEGNKDGLXXXXXXXXXXXXXGDSKAKRPREVEGGQDEEEEEDLEEIP----PMYRQARGLFLAPDVLPASEYKLKWTDPDEPGLLKFLVEGMGFNAERVASGIEKLKNARKNASQKRMDSFFSAIPNP 471
            MGI GL+KLL+DE P C+KE  L+SLTGRK+A+DASMAMYQFLIAVRSG EG  + MLTNEAGEVTSHIQGMFNRTI++L+ G+KP YVFDGKPP LKGGEL KR  KR KAE D ++A       DVDKFSKRLVRVT QHNEDCKTLLRLMGVPVVDA  EAEAQCAALARDG V+GT TEDMDALTFRTPKL+RR+T +  +QPIME+DY  +L+GL LT+E+FVD+CILCGCDYT S++GIGPKKAL LI++H +IEEI+KHLD SK+ +P DW+                                      +T T   + A                            XXXXXXXXXXXXX                       E +P    PMY++AR LFL PDV PA+ Y LKWTDP+   L  FLVE M FNAERVA+GI+KLK ARK   Q RMD+FF +   P
Sbjct:    1 MGIQGLTKLLNDECPNCIKEYDLNSLTGRKIAIDASMAMYQFLIAVRSGSEGVAATMLTNEAGEVTSHIQGMFNRTIKLLTSGLKPVYVFDGKPPTLKGGELAKRAAKRVKAETDWQDARENGTTEDVDKFSKRLVRVTTQHNEDCKTLLRLMGVPVVDASCEAEAQCAALARDGVVFGTGTEDMDALTFRTPKLIRRLT-TNKNQPIMEVDYAGVLEGLGLTHEEFVDMCILCGCDYTDSIRGIGPKKALMLIKKHHSIEEILKHLDRSKHGIPADWIP------------------------------------GETPTPLAKPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPAAPVVQEAVPADKIPMYKEARRLFLEPDVFPANTYDLKWTDPNVEELTTFLVEKMQFNAERVAAGIKKLKEARKKGGQTRMDTFFKSTAPP 439          
BLAST of mRNA_H-paniculata_contig109.581.1 vs. uniprot
Match: A0A7S2SD31_9STRA (Flap endonuclease 1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD31_9STRA)

HSP 1 Score: 413 bits (1062), Expect = 3.020e-137
Identity = 240/471 (50.96%), Postives = 297/471 (63.06%), Query Frame = 0
Query:    1 MGIHGLSKLLSDEVPGCMKEVGLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQS--QMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYVFDGKPPQLKGGELEKRKEKRAKAEEDLKNATAAEEKNDVDKFSKRLVRVTRQHNEDCKTLLRLMGVPVVDAPSEAEAQCAALARDGAVYGTATEDMDALTFRTPKLLRRMTFSGASQ-PIMEIDYQKLLQGLDLTYEKFVDLCILCGCDYTGSVKGIGPKKALNLIRQHGTIEEIIKHLDSSKYPVPDDWLETSERNKKRKAMRLEANCRMEARAKNEAKVNKP-DAQEAKTDTSKKQEAGVGEGKYGVAAGDESAKGNDTEGNKDGLXXXXXXXXXXXXXGDSKAKRPREVEGGQDEEEEEDLEEIPPMYRQARGLFLAPDVLPASEYKLKWTDPDEPGLLKFLVEGMGFNAERVASGIEKLKNARKNASQKRMDSFFSA 467
            MGIHGL  L++DE P   KE  + +L GRKVA+DASMA+YQFLIAVRS     +  QMLTNEAGEVTSHIQG+FNRTIRML+ GVKPCYVFDGKPP LK GEL KR + R KA+E+LK A   E+  D+DK+SKRLV+VTR+HNED K LLRLMGVPV++AP EAEAQCAALA+ G V+ TATEDMDALTF+TP LL+RMTFS   Q PIM+I + KLL GL +T E+FVDLCILCGCDY     GIGPK AL L+R++G +E I+K+LD  K+P+P  W                           E    KP D   A                      + + + N+T+  +                 D+K +     E  Q+ E+E+  E   P++ + R LF  P V       LKWT+PDE GL+KFLVE  GFNAERV+SGI+KLK  +   +Q+RMDSFF +
Sbjct:   22 MGIHGLMNLVADEAPESCKEQDIKALVGRKVAIDASMALYQFLIAVRSAEHAGAVTQMLTNEAGEVTSHIQGLFNRTIRMLTNGVKPCYVFDGKPPTLKSGELAKRTKARTKAKEELKAAEEREDAEDIDKYSKRLVKVTREHNEDAKRLLRLMGVPVIEAPGEAEAQCAALAKAGLVWATATEDMDALTFQTPHLLKRMTFSAKQQAPIMQISHDKLLHGLGITQEQFVDLCILCGCDYCDRPSGIGPKTALKLVRKYGNLENIVKNLDKKKHPLPVGW---------------------------ERPAPKPADPAPAAXXXXXXXXXXXXXXXXSEGGSEVTHEENETDAQEP----------------DAKPEPAASAETAQEPEKEQPWE---PLFVEVRQLFHTPLVQDPVNCSLKWTEPDEEGLIKFLVEEKGFNAERVSSGIKKLKEMKGKGTQQRMDSFFKS 446          
BLAST of mRNA_H-paniculata_contig109.581.1 vs. uniprot
Match: A0A6G0WCI0_9STRA (Flap endonuclease 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCI0_9STRA)

HSP 1 Score: 380 bits (975), Expect = 2.990e-125
Identity = 216/481 (44.91%), Postives = 278/481 (57.80%), Query Frame = 0
Query:    1 MGIHGLSKLLSDEVPGCMKEVGLDSLTGRKVAVDASMAMYQFLIAVRSGGE--GQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYVFDGKPPQLKGGELEKRKEKRAKAEEDLKNATAAEEKNDVDKFSKRLVRVTRQHNEDCKTLLRLMGVPVVDAPSEAEAQCAALARDGAVYGTATEDMDALTFRTPKLLRRMTFSGASQ-PIMEIDYQKLLQGLDLTYEKFVDLCILCGCDYTGSVKGIGPKKALNLIRQHGTIEEIIKHLD---SSKYPVPDDWLETSERNKKRKAMRLEANCRMEARAKNEAKVNKPDAQEAKTDTSKKQEAGVGEGKYGVAAGDESAKGNDTEGNKDGLXXXXXXXXXXXXXGDSKAKRPREVEGGQDEEEEEDLEEIPPMYRQARGLFLAPDVLPASEYKLKWTDPDEPGLLKFLVEGMGFNAERVASGIEKLKNARKNASQKRMDSFFSAIPNPNAGS 475
            MGI GL KLL+DE PGC+KE+ + +L+GR VA+DASMA+YQFL+AVRS GE  G +QMLTNEAGEVTSHIQGMFNRTIR++  G+KP YVFDGKPP +K GEL KR E+R  A+E+LK AT      D+DKF+KRLVR T QHNEDCK LL+LMGVP ++AP EAEA CAALA+   V+ + TEDMD +TF TP L RR+T + + + PI+EI   K+LQ L+LT+E+FVDLCILCGCDY  +++GIGPKKAL+ I++H  IE  + HL    S    VPD+WL                                                                                                      G+D            +Y+QAR +F+ PDV+  S  ++KW DP    L +FLVE  GFN+ERV + IEKLK A+   SQ+R++SFF+ +P+ +  S
Sbjct:    1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNEAGEVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKSGELAKRSERRQTAQENLKTATEEGNVEDIDKFNKRLVRATPQHNEDCKELLQLMGVPFINAPCEAEATCAALAKSNKVFASGTEDMDVMTFGTPVLFRRLTIAASRKLPILEIRLDKVLQELELTHEQFVDLCILCGCDYCDTIRGIGPKKALSAIKEHKNIETFVAHLQQHPSKGITVPDEWL------------------------------------------------------------------------------------------------------GEDA-----------IYKQARAMFIEPDVVDTSSVEIKWKDPSVEELRQFLVEKHGFNSERVMNAIEKLKKAKTTHSQQRLESFFTVLPSDSKSS 368          
BLAST of mRNA_H-paniculata_contig109.581.1 vs. uniprot
Match: W7U4Z8_9STRA (Flap endonuclease 1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4Z8_9STRA)

HSP 1 Score: 380 bits (975), Expect = 2.850e-124
Identity = 229/468 (48.93%), Postives = 294/468 (62.82%), Query Frame = 0
Query:    1 MGIHGLSKLLSDEVPGCMKEVGLDSLTGRKVAVDASMAMYQFLIAVR--SGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYVFDGKPPQLKGGELEKRKEKRAKAEEDLKNATAAEEKNDVDKFSKRLVRVTRQHNEDCKTLLRLMGVPVVDAPSEAEAQCAALARDGAVYGTATEDMDALTFRTPKLLRRMTFSGASQPIMEIDYQKLLQGLDLTYEKFVDLCILCGCDYTGSVKGIGPKKALNLIRQHGTIEEIIKHLDSSKYPVPDDWLETSERNKKRKAMRLEANCRMEARAKNEAKVNKPDAQEAKTDTSKKQEAGV-GEGKYGVAAGDESAKGNDTEGNKDGLXXXXXXXXXXXXXGDSKAKRPREVEGGQDEEEEEDLEEIPPMYRQARGLFLAPDVLPASEYKLKWTDPDEPGLLKFLVEGMGFNAERVASGIEKLKNARKNASQKRMDSFF 465
            MGI GL+KL++DE P  +KE  ++   GR VAVDASMA+YQFLIA+R  SGG   SQ LTNEAGEVTSHIQG+FNRTIRML+ G+KP +VFDGKPP LKGGEL+KR+EKR KAE +LK A       + D+ SKRLVR  ++ + DCK LL LMGVP ++AP EAEAQCAALA+ G VY  ATED D LTF TP+LLR MT +G   PI EIDY+K+L+GL LT+ +F+DLCIL GCDYT +++GIGPK AL LI+++G IE +++++   KY VP +WL    R K RK   L  +         E     P  + A        +AG+ GE + G+ A    A+                         D  AK    VEG        ++ E+P  Y  AR LF+ P++   +E   KW +P+E GL  FL++ +GFN +RV SGI KLK +R    QKR+DSFF
Sbjct:    1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQ-LTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMTSAG-DNPIKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWLP---RIKVRKPSSLPPSAPPSVSPVEEGDKAMPGDENACKTAEVDSKAGMEGEKEEGIKAAAIVAR---------------------EVAPDEPAKS---VEG--------EVMEMP-AYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQQKRLDSFF 430          
BLAST of mRNA_H-paniculata_contig109.581.1 vs. uniprot
Match: A0A6T7HKT1_9STRA (Flap endonuclease 1 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7HKT1_9STRA)

HSP 1 Score: 376 bits (965), Expect = 5.470e-123
Identity = 247/482 (51.24%), Postives = 296/482 (61.41%), Query Frame = 0
Query:    1 MGIHGLSKLLSDEVPGCMKEVGLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQ---MLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYVFDGKPPQLKGGELEKRKEKRAKAEEDLKNATAAEEKNDVDKFSKRLVRVTRQHNEDCKTLLRLMGVPVVDAPSEAEAQCAALARDGAVYGTATEDMDALTFRTPKLLRRMTFSGASQP-IMEIDYQKLLQGLDLTYEKFVDLCILCGCDYTGSVKGIGPKKALNLIRQHGTIEEIIKHLDSSKYPVPDDWLETSERNKKRKAMRLEANCRMEARAKNEAKVNKPDAQEAKTDTSKKQEAGVGEGKYGVAAGDESAKGNDTEGNKDGLXXXXXXXXXXXXXGDSKAKRPREVEGGQDEEEEEDLEEIPPMYRQARGLFLAPDVLPASEYKLKWTDPDEPGLLKFLVEGMGFNAERVASGIEKLKNARKNAS--QKRMDSFFSAIPNPNAGSK 476
            MGI GL+KLLSDE P C++EV L SL GRK+A+DASMA+YQFLIAVRS G   +    MLTN  GE TSHIQG+FNRTIR LS+G++P YVFDGKPP LK GEL KR+EKR KA+  LKNA       + DK SKRLVR   + NEDC  LL LMGVPVV AP EAEAQ +ALAR G VY TATEDMDALTFRTP LLR+MTF+ AS+  I  +DY+K L+GLDL +++FVDLCIL GCDY  S+KG+GPK AL LIR+H  IE I+KH+D +KY +PD W+                         NEA+ ++ + Q                        +E  K  +        XXXXXXXXXXXXX                    E+L  + P+Y +AR LF   +VL   +  LKW       L KFLV+ MGFNAERVA  IEKL  A +     Q RMDSFF+  PNPNA +K
Sbjct:    1 MGIKGLAKLLSDEAPECVREVPLSSLQGRKIAIDASMAIYQFLIAVRSSGNNPNMAAAMLTNAEGETTSHIQGLFNRTIRFLSEGIRPVYVFDGKPPNLKSGELVKRREKREKAQTALKNAQEDGNVEEQDKQSKRLVRAGTKENEDCIRLLNLMGVPVVRAPCEAEAQASALARAGTVYATATEDMDALTFRTPILLRKMTFANASKSDIQTMDYKKALEGLDLNHDQFVDLCILLGCDYCDSIKGVGPKTALKLIREHSDIETILKHIDRNKYTIPDAWIP------------------------NEARASEKEDQ----------------------VKEEXXKAYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------EEL--LVPIYVEARRLFKEHEVL--EKVDLKWVPCQPEPLTKFLVDEMGFNAERVAKSIEKLTKALQKTCKPQARMDSFFTVKPNPNAAAK 424          
BLAST of mRNA_H-paniculata_contig109.581.1 vs. uniprot
Match: A0A7R9UCR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCR1_9STRA)

HSP 1 Score: 371 bits (953), Expect = 7.700e-123
Identity = 186/283 (65.72%), Postives = 225/283 (79.51%), Query Frame = 0
Query:    1 MGIHGLSKLLSDEVPGCMKEVGLDSLTGRKVAVDASMAMYQFLIAVRSGGEG-QSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYVFDGKPPQLKGGELEKRKEKRAKAEEDLKNATAAEEKNDVDKFSKRLVRVTRQHNEDCKTLLRLMGVPVVDAPSEAEAQCAALARDGAVYGTATEDMDALTFRTPKLLRRMTFSGAS-QPIMEIDYQKLLQGLDLTYEKFVDLCILCGCDYTGSVKGIGPKKALNLIRQHGTIEEIIKHLDSSKYPVPDDWLETS 281
            MGI GL+KLL+DE PGC+KE  L S TGRKVA+DASMA+YQF+IA+RSG EG  +Q+LTNE GE+TSHIQG+FNRTIRML+ G+KP YVFDGKPP LK GEL KR  +R +A+  L+ A + E+K   +K+ KRL RVTR+H+ED   LLRLMGVPVV AP EAEAQCA LAR G V+ T TEDMDAL FRTPKLLRR+TF  A+ QP+ME+DYQK + GL LTYE+FVDLCILCGCDYT ++KGIGPK AL L+R HG+I  +++ LD  KY VP  W++ S
Sbjct:    1 MGIKGLTKLLNDEAPGCIKEAELSSYTGRKVAIDASMALYQFIIAIRSGSEGFAAQVLTNEQGEITSHIQGIFNRTIRMLTNGIKPVYVFDGKPPTLKSGELAKRMARRQEAQSKLEAAESVEDK---EKYGKRLTRVTRKHSEDAMKLLRLMGVPVVQAPCEAEAQCAELARAGKVWATGTEDMDALCFRTPKLLRRLTFGAANKQPVMEVDYQKAIDGLGLTYEQFVDLCILCGCDYTDTIKGIGPKTALKLVRTHGSIANVVRSLDKKKYQVPAGWIKGS 280          
BLAST of mRNA_H-paniculata_contig109.581.1 vs. uniprot
Match: W4FTR5_9STRA (Flap endonuclease 1 n=2 Tax=Aphanomyces TaxID=100860 RepID=W4FTR5_9STRA)

HSP 1 Score: 370 bits (949), Expect = 2.180e-121
Identity = 209/482 (43.36%), Postives = 279/482 (57.88%), Query Frame = 0
Query:    1 MGIHGLSKLLSDEVPGCMKEVGLDSLTGRKVAVDASMAMYQFLIAVRSGGE--GQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYVFDGKPPQLKGGELEKRKEKRAKAEEDLKNATAAEEKNDVDKFSKRLVRVTRQHNEDCKTLLRLMGVPVVDAPSEAEAQCAALARDGAVYGTATEDMDALTFRTPKLLRRMTFSGASQ-PIMEIDYQKLLQGLDLTYEKFVDLCILCGCDYTGSVKGIGPKKALNLIRQHGTIEEIIKHLD---SSKYPVPDDWLETSERNKKRKAMRLEANCRMEARAKNEAKVNKPDAQEAKTDTSKKQEAGVGEGKYGVAAGDESAKGNDTEGNKDGLXXXXXXXXXXXXXGDSKAKRPREVEGGQDEEEEEDLEEIPPMYRQARGLFLAPDVLPASEYKLKWTDPDEPGLLKFLVEGMGFNAERVASGIEKLKNARKNASQKRMDSFFSAIPNPNAGSK 476
            MGI GL KLL+DE PGC+KE+ + +L+GR VA+DASMA+YQFL+AVRS GE  G +QMLTN+AG+VTSHIQGMFNRTIR++  G+KP YVFDGKPP +KGGEL KR E+R  A+++LK AT      D++KF+KRLVR T QHN DCK LL LMGVP ++AP EAEA CAALA+   V+ + TEDMD +TF TP L RR+T + + + PI+EI   K+L  L+L+YE+FVDLCILCGCDY  S++G+GPKKAL+ I++H +IE  + HL    S    VPD+WL                                                                                                      G+D            +Y+QAR +FL PDV+  ++  +KW DP+   L +FLV+  GF+ +RV + IEKLK A+ + SQ+RM+SFF+ +P+ ++  K
Sbjct:    1 MGIKGLMKLLTDEAPGCVKELQMSALSGRSVAIDASMALYQFLVAVRSNGEHGGAAQMLTNDAGDVTSHIQGMFNRTIRLMENGLKPVYVFDGKPPVMKGGELAKRTERRQTAQDNLKTATEEGNVEDIEKFNKRLVRATPQHNNDCKELLALMGVPFINAPCEAEATCAALAKHNKVFASGTEDMDVMTFGTPVLFRRLTIAASRKLPILEIKLDKVLAELELSYEQFVDLCILCGCDYCDSIRGVGPKKALSAIKEHKSIENYVTHLQAHPSKGITVPDEWL------------------------------------------------------------------------------------------------------GEDA-----------IYKQARAMFLEPDVIDMADVDIKWKDPNVDDLRQFLVDKHGFSLDRVMNAIEKLKKAKTSHSQQRMESFFTVLPSSDSKLK 369          
BLAST of mRNA_H-paniculata_contig109.581.1 vs. uniprot
Match: FEN1_OSMMO (Flap endonuclease 1 n=21 Tax=Clupeocephala TaxID=186625 RepID=FEN1_OSMMO)

HSP 1 Score: 366 bits (939), Expect = 4.720e-120
Identity = 205/467 (43.90%), Postives = 271/467 (58.03%), Query Frame = 0
Query:    1 MGIHGLSKLLSDEVPGCMKEVGLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYVFDGKPPQLKGGELEKRKEKRAKAEEDLKNATAAEEKNDVDKFSKRLVRVTRQHNEDCKTLLRLMGVPVVDAPSEAEAQCAALARDGAVYGTATEDMDALTFRTPKLLRRMTFSGASQ-PIMEIDYQKLLQGLDLTYEKFVDLCILCGCDYTGSVKGIGPKKALNLIRQHGTIEEIIKHLDSSKYPVPDDWLETSERNKKRKAMRLEANCRMEARAKNEAKVNKPDAQEAKTDTSKKQEAGVGEGKYGVAAGDESAKGNDTEGNKDGLXXXXXXXXXXXXXGDSKAKRPREVEGGQDEEEEEDLEEIPPMYRQARGLFLAPDVLPASEYKLKWTDPDEPGLLKFLVEGMGFNAERVASGIEKLKNARKNASQKRMDSFFS 466
            MGIHGL+KL++D+ PG +KE  + +  GRK+A+DASM +YQFLIAVR  G     +L NE GE TSH+ GMF RTIRML  G+KP YVFDGKPPQLK GELEKR E+RA+AE+ L  A  A E+ ++DKFSKRLV+VTRQHN++CK LL LMGVP V+AP EAEA CAAL + G V+ TATEDMD LTF T  LLR +T S A + PI E  + ++LQ + L++E+F+DLCIL GCDY G++KGIGPK+A++LIRQHG+IEEI+ ++D SK+PVP+DWL                                                                                                                      Y++ARGLFL PDV+  S  +LKW++PDE GL++F+     F+ +R+ +G +K+  +R+ ++Q R+DSFFS
Sbjct:    1 MGIHGLAKLIADQAPGAIKEQEMKNFFGRKIAIDASMCIYQFLIAVRQDGN----VLQNEDGETTSHLMGMFYRTIRMLENGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEAGEQENIDKFSKRLVKVTRQHNDECKKLLTLMGVPYVEAPCEAEASCAALVKAGKVFATATEDMDGLTFGTGVLLRHLTASEAKKLPIQEFHFSRILQDIGLSHEQFIDLCILLGCDYCGTIKGIGPKRAMDLIRQHGSIEEILDNIDLSKHPVPEDWL----------------------------------------------------------------------------------------------------------------------YKEARGLFLTPDVVDCSCLELKWSEPDEEGLVQFMCAEKQFSEDRMRNGCKKILKSRQGSTQGRLDSFFS 345          
BLAST of mRNA_H-paniculata_contig109.581.1 vs. uniprot
Match: A0A3B4DB77_PYGNA (Flap endonuclease 1 n=5 Tax=Otomorpha TaxID=186634 RepID=A0A3B4DB77_PYGNA)

HSP 1 Score: 363 bits (933), Expect = 3.790e-119
Identity = 198/467 (42.40%), Postives = 271/467 (58.03%), Query Frame = 0
Query:    1 MGIHGLSKLLSDEVPGCMKEVGLDSLTGRKVAVDASMAMYQFLIAVRSGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYVFDGKPPQLKGGELEKRKEKRAKAEEDLKNATAAEEKNDVDKFSKRLVRVTRQHNEDCKTLLRLMGVPVVDAPSEAEAQCAALARDGAVYGTATEDMDALTFRTPKLLRRMTFSGASQ-PIMEIDYQKLLQGLDLTYEKFVDLCILCGCDYTGSVKGIGPKKALNLIRQHGTIEEIIKHLDSSKYPVPDDWLETSERNKKRKAMRLEANCRMEARAKNEAKVNKPDAQEAKTDTSKKQEAGVGEGKYGVAAGDESAKGNDTEGNKDGLXXXXXXXXXXXXXGDSKAKRPREVEGGQDEEEEEDLEEIPPMYRQARGLFLAPDVLPASEYKLKWTDPDEPGLLKFLVEGMGFNAERVASGIEKLKNARKNASQKRMDSFFS 466
            MGIHGL+KL++D+ P  +KE  + +  GRK+AVDASM +YQFLIAVR  G     +L NE GE TSH+ GMF RTIRML  G+KP YVFDGKPPQLK GELEKR E+RA+AE+ L  A    E+ ++DKFSKRLV+VT+QHN++CK LL+LMGVP ++AP EAEA CAAL + G V+ TATEDMD LTF T  LLR +T S A + PI E  + ++LQ ++LT+++F+DLC+L GCDY G++KGIGPK+A++LIRQHG+IEEI++++D SK+P P+DWL                                                                                                                      Y++ARGLFL P+V+  S  +LKW++PDE GL++F+     FN +R+ +G +K+  +R+ ++Q R+D+FF+
Sbjct:    1 MGIHGLAKLIADQAPSAIKEQDIKNYFGRKIAVDASMCIYQFLIAVRQDGN----VLQNEDGETTSHLMGMFYRTIRMLDSGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQETGEQENIDKFSKRLVKVTKQHNDECKKLLKLMGVPYIEAPCEAEASCAALVKAGKVFATATEDMDGLTFGTSVLLRHLTASEAKKLPIQEFHFSRILQEMNLTHQQFIDLCVLLGCDYCGTIKGIGPKRAIDLIRQHGSIEEILENIDQSKHPAPEDWL----------------------------------------------------------------------------------------------------------------------YKEARGLFLEPEVVDCSNVELKWSEPDEDGLIQFMCAEKQFNEDRIRNGCKKIMKSRQGSTQGRLDTFFT 345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig109.581.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF9_ECTSI1.850e-22370.23Flap endonuclease 1 n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835Z748_9STRA4.850e-14956.72Flap endonuclease 1 n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2SD31_9STRA3.020e-13750.96Flap endonuclease 1 n=1 Tax=Rhizochromulina marina... [more]
A0A6G0WCI0_9STRA2.990e-12544.91Flap endonuclease 1 n=1 Tax=Aphanomyces euteiches ... [more]
W7U4Z8_9STRA2.850e-12448.93Flap endonuclease 1 n=2 Tax=Nannochloropsis gadita... [more]
A0A6T7HKT1_9STRA5.470e-12351.24Flap endonuclease 1 n=1 Tax=Attheya septentrionali... [more]
A0A7R9UCR1_9STRA7.700e-12365.72Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
W4FTR5_9STRA2.180e-12143.36Flap endonuclease 1 n=2 Tax=Aphanomyces TaxID=1008... [more]
FEN1_OSMMO4.720e-12043.90Flap endonuclease 1 n=21 Tax=Clupeocephala TaxID=1... [more]
A0A3B4DB77_PYGNA3.790e-11942.40Flap endonuclease 1 n=5 Tax=Otomorpha TaxID=186634... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 439..459
NoneNo IPR availableCOILSCoilCoilcoord: 101..124
NoneNo IPR availableGENE3D3.40.50.1010coord: 2..334
e-value: 5.7E-114
score: 382.9
coord: 373..478
e-value: 3.7E-17
score: 64.5
NoneNo IPR availablePANTHERPTHR11081:SF51FLAP ENDONUCLEASE 1coord: 396..492
coord: 1..284
IPR006084XPG/Rad2 endonucleasePRINTSPR00853XPGRADSUPERcoord: 28..42
score: 49.79
coord: 226..241
score: 48.44
coord: 149..166
score: 60.42
coord: 170..190
score: 42.56
coord: 85..104
score: 53.44
IPR006084XPG/Rad2 endonucleasePANTHERPTHR11081FLAP ENDONUCLEASE FAMILY MEMBERcoord: 1..284
IPR006084XPG/Rad2 endonucleasePANTHERPTHR11081FLAP ENDONUCLEASE FAMILY MEMBERcoord: 396..492
IPR006085XPG N-terminalSMARTSM00485xpgn3coord: 1..111
e-value: 1.3E-46
score: 170.8
IPR006085XPG N-terminalPFAMPF00752XPG_Ncoord: 1..111
e-value: 4.6E-28
score: 97.6
IPR006086XPG-I domainSMARTSM00484xpgineucoord: 150..221
e-value: 2.1E-29
score: 113.7
IPR006086XPG-I domainPFAMPF00867XPG_Icoord: 150..236
e-value: 4.8E-28
score: 97.4
IPR008918Helix-hairpin-helix motif, class 2SMARTSM00279HhH_4coord: 223..256
e-value: 4.5E-13
score: 59.4
IPR019974XPG conserved sitePROSITEPS00842XPG_2coord: 153..167
IPR019974XPG conserved sitePROSITEPS00841XPG_1coord: 83..97
IPR023426Flap endonuclease 1HAMAPMF_00614Fencoord: 1..356
score: 105.662
IPR0362795'-3' exonuclease, C-terminal domain superfamilySUPERFAMILY478075' to 3' exonuclease, C-terminal subdomaincoord: 221..466
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 2..236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig109contigH-paniculata_contig109:2168..8509 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig109.581.1mRNA_H-paniculata_contig109.581.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig109 1708..8635 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig109.581.1 ID=prot_H-paniculata_contig109.581.1|Name=mRNA_H-paniculata_contig109.581.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=499bp
MGIHGLSKLLSDEVPGCMKEVGLDSLTGRKVAVDASMAMYQFLIAVRSGG
EGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYVFDGKPPQLKGGE
LEKRKEKRAKAEEDLKNATAAEEKNDVDKFSKRLVRVTRQHNEDCKTLLR
LMGVPVVDAPSEAEAQCAALARDGAVYGTATEDMDALTFRTPKLLRRMTF
SGASQPIMEIDYQKLLQGLDLTYEKFVDLCILCGCDYTGSVKGIGPKKAL
NLIRQHGTIEEIIKHLDSSKYPVPDDWLETSERNKKRKAMRLEANCRMEA
RAKNEAKVNKPDAQEAKTDTSKKQEAGVGEGKYGVAAGDESAKGNDTEGN
KDGLEEDGDEKDANNKTGDSKAKRPREVEGGQDEEEEEDLEEIPPMYRQA
RGLFLAPDVLPASEYKLKWTDPDEPGLLKFLVEGMGFNAERVASGIEKLK
NARKNASQKRMDSFFSAIPNPNAGSKPKSTAKGKTAAAAKGKGKNKKR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006084XPG/Rad2
IPR006085XPG_DNA_repair_N
IPR006086XPG-I_dom
IPR008918HhH2
IPR019974XPG_CS
IPR023426Flap_endonuc
IPR0362795-3_exonuclease_C_sf
IPR029060PIN-like_dom_sf