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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 782 |
| Cds size | 687 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2198.5807.1 >prot_H-paniculata_contig2198.5807.1 ID=prot_H-paniculata_contig2198.5807.1|Name=mRNA_H-paniculata_contig2198.5807.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=229bp
MNSRTYLPVKENRDDVSQGIVSCRISAAGDTNIVKKEAPEDTEQAAAAAA
TTAAADPPPKRSLTKLAVLEMEIRKVEKEQGEVQAAMEKKLPHHGMSDHR
MLEDNLRRLWRKEEQLRTKEEQLRQKELLLLRSADKVPLDACEPAVLVEG
DADRIVDADADASSNADVDADATSNANTDVSSNATADADADADSVPPVQE
PEPMTCKFQTVGGKILEVEGLYPHTTVQH back to topmRNA from alignment at H-paniculata_contig2198:10187..18259- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2198.5807.1 ID=mRNA_H-paniculata_contig2198.5807.1|Name=mRNA_H-paniculata_contig2198.5807.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8073bp|location=Sequence derived from alignment at H-paniculata_contig2198:10187..18259- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGTAGTACAGGATAACCTTTTGCAGTAGTTGGCGAGTGACAGACAGGGA
TACCTGTTCATCTTCGGACAGTGATATCTTCTCATTTCGGTACCATGAAC
AGCAGGACGTACTTGCCCGTCAAGGAAAATCGCGATGATGTTTCCCAAGG
GATCGTGTCATGTCGCATCAGCGCTGCTGGAGATACCAACATTGTGAAAA
AGGAGGCGCCGGAGGATACCGAGCAGGCAGCAGCAGCAGCAGCAACAACA
GCAGCAGCCGATCCGCCGCCGAAGAGGTCATTGACTAAGTTAGCAGTGCT
CGAGATGGAGATCAGGAAGGTGGAGAAGGAACAAGGGGAGGTGCAGGCGG
CAATGGAGAAGAAACTTCCTCACCACGGCATGAGTGATCATGTGAGGCGA
CGCGATTATTTATGGGTGGTGCCCAGAGGGCTAGTCGGGTTCAAGAGCAG
GCCGTTGACCTATTTTGTATATAACCATTGTGCCCTGTGTGAGTGATGTA
TATGCCCCATACCCGCTGCGTCCATAGCAACGAATGAGCAGCCTTACACA
GTTCCCTGAAGGGGGGAGAGAAGCGGCGGCGTAGCATCGTCTTCCCCGTG
AAGTATTGCTCTGAAACTACATGAGTACTTGTACTGGCTGTCCACACCTC
ACAGACGGACTGTTGCCTCTGACTGGGGTACATGTAGGTGTACATTAGAC
TGGCTGATGCTGTTCCCAAAATCATCAATATCAGTCTTGTAGCATGACAA
GTTGATCCAACGCTACATGGTGGCGCTACTTCAGCTATGGATACGTGCCT
TTAATGGCAGCGTTTCTTTGCATTATGCCTGTATTATACCCTCTGCGTTC
CCCAAATGATGCTCTCATGAAAATACCAACCGCCAAATTTCCTCCCGCCC
ACCTCTGGGCTGCACAGTGCACCCTACCGTTACAATGAAACACGAGACGA
AAACCTACTGGATTTCTTCTGAAGCCGCGCAGACAGTAGTAATGCCGAGG
CCGTACCGAACGGCACTGACTATCTGTCTGCAATTGCCAAGCCCAAGCAC
GAGTTGAAAGAGCGATAACGCGTGACGAATCGCTCCTGCAGAGGTCAGAA
GGACCCCGAACAAAGCTAGCGAATGCCGACCTCTGTCCGGGATCGCTGAT
CGACCCACCGACGGACTACGGAGATATGCAATGGTGCCGCCAGATATACA
CCGATTGCATGGATAGAGACTTGTCATGTTCCAGATACACGGAGGAGTTA
TAGTGTATAAATATAGCTGTGTACCTCTCTTGTTCGCCCTCCTCCCCTAC
TTCCCGCTGCAGTCAGTCCAGTCAGTAATACTCTATGTGTATCGTCTGTA
CATATTTGGGTGTATATATTGTAGTGTATAGAGCGATTGAGGGGCCGTCT
CCTATAAAGGAGCGTTTCTTCACCCTTTTTACCGCAATTTTAATCAGATG
TATGCCCTACCAACCCACGCTGGAGTCTACTGTGTCGGGTTGGGTGTTGA
TGTCGGTGTCAACCCTTTGACTCCTGGGGGCCTGTAGTGTGACATTTCGT
AACTAGCGAAGTCTCACAAGCCCGTCTCCCAAGAAGGGAGGGGAATTGCA
TTTTGAGGTTAGGGCGGTGACGGACGAAATTGTTTTTGATAAGGATATCA
TCATATCATAGATCACCAATGAAATATCAGTGGGAATATAAATGAGAAAC
GTACCACGGAATGATTATAATAGTACCCAGTGAATCTAAGAGCGGAAGGA
GTCGAAGCGACCATGTTCATTTCAATGATTGCACATCCACCGCAGCTGCA
TGATTTGCTGCAGCTCCAACCCCAGTGCTTGACAGTTGATGTATAGGTAG
AACAGCTGACAGACTGCAGTACCACACACATTGGTTCCATCGAGCATTGC
TAACCAACTGGACAGCGCAAGCAGCATGATACAGTCAGTAGAGTTGCGCC
CGGCCACGAAAGAACAGACAGTAAAATAGAATCCATGCAACAGTTAATGT
ACTGCTGCAGCACCATATCTATTTCCCCGGTGAGACTCTGGCAACAACTA
CGATAATAAAAATAGGGAAATAGGGTAGCAGGCACAGGCATCTCCCGAGA
GTTCCCTAGCGAGCGATCGTCGCCGCTTGTATAGCGTCCTGTTGTGTGTG
ACGCTATTCACAGATATAGCAGCTGACAGCCCGCCACGGTCGTCGCAGGT
GGAACATGACAGCACGAGTGATGACCTACAACAAGATCCGCAATTGATTC
TTCACAAAAACTTTACGTGAGTGGATGGGGTAGCACGGGAACACTCTGTT
TATTTGCTCCCTGGGCAAGCCTTGGGAAGTAAATTTACTGTAATACCCTC
TAAGTTGGCACCCCTCTTTTCTGATCTCCCACGTAAATTAACCCTCTCGC
AGTGCAGGCGACCCCCCTGTATGAGACATTATACAGAGCATTGGCTGTAC
TGCAGTAATCAGTCAGTAGTACGGTACAGCACAGCACCGTGTATCAAAAG
CAAACACACACACACACACACAAACCGTAAAATTACAGGCATGAACGTTT
TCTGCAACTAAACTGATAATTCTTGTCACGGGTACTGTAACTGTGTTGTA
CGAACATTTGGCGGTCTTGCCTGCAGTAGAAATACGTGCGTTCTTCACCC
CATTCATCTCTAGCGTGGTATACACTGGCATCTCGTGCCGGATTAGGGTT
TCATCCATTGTCCTCAACTCGCGGAATACCTCCTCGTGTACCGATAATAG
CTACCCAGGAGACACCTCCGTAGCTTCCACATTCACAGCCGCACTCGCGC
TCTGACCCTGTGCGTTCGGCGTGGCTTCTGAACGCTTGGCGGCGTAGATC
TCCGCGGCCCGCTCCTTGTTGGCAGTGCGTACTTTCACCACCCACGCCCA
TGACTTTCCCGCATAGCTCTACGAGAGCTTTCGACCAACGCTGATACGGC
GACGGATGGAAAACCTGTTCCTCTTGCGAAACCCGGCGTACCATTTGTTG
AGCTTGTTGTTGAACTTTTTCATCTTGGCAGTATCATTGCTGCTCGGAGG
TCCGCCAAACGCGTGGGGCTTATAACCTGTAAGAGCGTGGTCAAGACTTC
CCGCCCACCCACCGACGCCGCGGGACAATTGACGATTGTGGTTGATCCAG
TCACACATGTCCTCCTAAACCTCAGCGCTGCTGGTCGCGCGCCCTCTGTT
ATTGCTCCGAAGACTACCGGCACCTTTCGCGCTCTTGATTTGCGTCTTCA
GCTATTCTTCGCTCTTACACCACTCGATGATTCCCTTTTTGTGCATGCCA
AGGACGGTGTTGCCCACCGCGAGTCCATCAGGGCAAATTATTCAAGAATA
TTCGACAACCTTCAGCATTTTGAGTATTGGGTATCTCCTTCTACCGCTTC
CCCCCATCCTCTCCATCTTGAAGCCAGGTTCGGCTCTTGCGCCTATCCGT
CGACCCCGCCTCCATCTCGTCAATCCCCTCCCTTGCTGCCTTGGAGTCGA
GACACATAAATAGTGGGGAATATTATGTTGGTAACTTCCGAAAAATCTCG
GCCTTCTCGACGAGGGTGTCAGTCACATAGTTACCATAATAGTTTTTGTG
TTGATCCATGTTTGTCATTACACTTGTGCTCCCGTTTCAGCCCATGAGTA
AGCATCAAATTTGTTCTGTAACATTTTCCGAGAAATTTCGAACTGCTTGG
CATACATAGGGTTGATTCAAACATGCGAGTGGCAGTCAATGACTTCAAAA
TGAAAAGTGCCCGGAAATTCCGAAATTGGTAGAATTTTCTTCTTTTGTGA
AAACCTTGCTGAAAAATGGGGGGTGTTGTTGTTTTGTTCTAAACGGGGTT
GCGGGGGGAGTGCCATTTGAAGACGTCGCTATAATGATCGAATCAGCTCT
AATTTCAGTGAAGCTGTGGATTTTTTTTTTTTTTTTAATGCTGAAGATGA
TGACAGAAAATGTTTCCAGTAGAGCACGCCGTGGTAAAAGATTAGTCAAG
TGAACAACTGAAGACAAGAAAACGGGGGTAATGTGATTTTGTCCCCAATC
ACTGTATTTATTTTAGTACAAAGCTAGAACAGTAGTCGTCCCAACGATAC
GGATGTCGGAGGAGGGTCGAAGCGAGTCCCACCACGCGCGCAACGGATTT
TTTTTGTGAAATTTCCCTTGATAGGAGAAGTCTGTTTTTCGCGTTTTTTT
TTCGCTGGCTCTGTGTCCACAATTTTTATCTCACATCGAGCTTAATTTTT
TGTTTTTGAGCACATTGGGTGGGTGCTATGTCTTATATCGTAATGCTAGC
TCTCATGTGATATCTTCGTGAAGTGCCCCAGGTGGCCCTAAATGAAGGTG
TCTGTCTCTGGCAATCAAACAAATGCATTGATGTACTCTCGCTGGTTTAC
TGCGGCAAAACACTGTGCACAAAGCAGTGCACTCGAAAAGTTATTATTCC
CTCTCGTTTTTGGACAGTTTCAAGTACGTCGGGTTTGTGACAACTTGGCC
CTGGCCAGTCTAGTCACTATGTCGGGGTGAGCTTTGCCCTTTGCAGAATT
TCATTAACTGCAGGGCAAACCGAAATTTTTTTTTGAGATGAATTACTATG
AGCTCAAGAAAAAAATTGTTCCAAAACTCCTCCCTATCAGAGTGAAAGGT
AACGAACAAGAGCACGGCCAACATGCAAAAAGCTACAAAGGTAGGTTAAT
CGACCCAAGTCTCCACCTGAAGTGTTCTTCTGTTGCGTGCAATACATGTA
TTCTTGCGTGTGACAATACGCACAGCGCATGCTTGAGGACAACCTTCGGA
GGCTTTGGAGAAAAGAGGAGCAGCTGAGGACGAAAGAGGAACAGCTCAGA
CAGAAGGAGCTTCTCCTACTCCGCTCCGCCGACAAAGTTCCGCTGGATGC
CTGTGAGACACATCTGATTGCCGGAGGCAGTAGTCAATGAGTCAAATTAT
ACATGAGATGTTGATTCGCCTGGTTGCTGCTGCTGCTGGGTCGTGATTTG
TCGACGAAAAACGGGTTTAATAGTGGACGTGTGGTAGCTCTAGAGTAGCG
TGTACAAGGCTGTCGTGGATCACAGAAGCGGCGAAACGCACTGGAGGTTG
ATTCCTCCGTTTACGTAACATAGGGCATCTCGACTGGTCTTAACCATACG
CGAAATTACAGCTCTTGTTCTATAGTAACAGGCAATAATAATCATAAAAA
ATCACGCGACGTACAAAATATTATGATGGTCATAACCTGTATTGATGTTT
AGTGACGACGGCAGAAACAAAATTTGGGCCGACGTAAACTGTAGCCGACA
ATCAGTATAACGTACAAGGCCGATCAACTCTTTCGCCGCGAAGCGGGTGA
GATCTTGACTGCAGCGGCAAACTTTGCGTACAAAATCCTTTCAACAATGC
CCTCAATTTTTGTCACGAAGGAGAAATCTTATATGTACATACACGAAAAA
AGAATATACAGGTCCTCCAGTGGCGGAGAAGACAATTGACACGAGAAATT
TCTTCTTTGGGGGGCCTACTACCTTCTGGAGATGGATTCATCAATCAATC
CATTCTCACCCAGACCCAATCATGTTCCTGTTGTAGAGCCCGTGATTGGT
TCCTAACGCCAAACTAATCCCAATCTTTGTAAAAATATGGCGCTAGGAAC
CAATCGCATGTTCTCTCTCTTATAAAACAGGAGAAGGAATTTCCGTCGTG
GAAATCAACGAAATCCATCTCGATATTGATGAAGGTCCGGGAGGCGTTGG
TGGAGTTTCGCGTTACAAAATTCTTGGATTCATGTATGGTCATGCGATCA
ACACGTACGCATTGACTCCGCCGCCGCCGCCGCCGCCTGGTATTGTTGAA
CGCTTGAACGCTTGAACGCTTGGCCGACTTACTCCTGAATTAAACACGTA
CACACACAACACAGGTGAACCTGCGGTTTTGGTTGAGGGTGATGCCGATC
GCATTGTTGATGCCGATGCCGATGCCAGTTCCAATGCCGATGTCGATGCC
GATGCCACTTCTAATGCCAATACGGATGTCAGCTCCAACGCAACTGCCGA
TGCCGATGCCGATGCCGATTCCGTCCCACCTGTCCAAGAACCAGAGGTGA
GAAGAAGCGCTGTTCGGTTCGTTTGGACCCCAATGTAGCTGTAGAATCGA
TGTTAACAGTTACTCGGTATTTGAGGAATACCTTGCAGTTCTCATATACA
CATGTAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATT
CAGACAGTCTGCCGCCGATGTTGGATCAATTTTTTGTTTGCGCTGCACGG
CAGCTTGTGGACACAGCTATTTACCAGACAACATCGACATCACTCTCTGG
CTTGCTACGACAGCTGGATATCCTCCTCGGGTGTGCTGCAAACGTAGGGT
TGCGGGAAATGGCCCATAATTATTCGTTCACGCTTTTGATGTACTGTCCT
ACCATACCAAAACCCCGATGCGAAGGCTTGGTTCAACCACGGACCTACGC
CCGAACGGGTAGGGTAGCTCGTGAACTGAGCATGACTGGAAGTCTAGTCA
AAGGTCTTTTAGTGGGTGCAACCCCCTCACTACCTACTTGGTTCGGCTGA
ACCGGGGTGGCGCCTACCCCGCAGAGGAATAAATAACTCTATTCTGTTGA
AGGAAATGTAGAAATACTTTGGCAGAAATACTTGGGTATGGAAGCATCGA
TAAAGGTTTTTGCCTTACTTAGCCTTCCGGGGGTTAAAAAAGAAGAGAAA
CAGGTTTGGTTCAAAAGTAACGCCGTAAAATATCATGCTCCACCCGATGC
GAACACAATGCCATGCCTCGGGCCCCCACAGGAGGTTTGGGGAGGTTTAA
TTTAACAAGCATACTTATAGAATTCTTGAAGACTTTTGGCTGCTGATGCC
GTACAGACTTGAGGGACGCAGCCTCGAATTGGTGCTGGAATTGAGGGTCT
CTTGTTCAGGACTCCCTCGATTTTTCAGTCGATGTGAAAAATATGCTGAT
TCGAGCCTAGCAAAAAAAGTTGTGCGGGGGACACACATCTAGTGTCGTCA
CCTTCGGGATATGCCTTCAGCTTTTTTGGTGTACACGCAATGTCTGGGGA
TAAATGGCGATAATATTGGGTCGTAACATGAACTAATTTGTACGAATCTT
GACTCGCTGCAGCCCCCTGTCTTTCCCTCCTGAAGGGCTTTCCATACAAC
GCAACTAATTCTGGAACTATACCTGGGCCAGCAAGTCTGGCAGGTGGACG
TTTGTTTCTTGCGGTGTTTTTGAAGTTGAAGCATAGGTGATGTGATAAAT
AGATAGATCTAACTTGGGTAGCATGACAGCAACTGGCAGTATGGGTCATG
GGCCTATGTCATGAATCTATGCGTATGTATTGCTGAGCCTTTGCGCCCGC
CAACTGCGCGGAAGGGGTCTATATAATTCCCAGCCCGCACCTGCTTGCGT
TAATTTGGTCGGTTTATGGATAATAACGAATTACTTCAGGAGCTTGATGA
TGCTACGCATACCTCTTGTGTTGTTGGTTGTTATCATGTTTTCTACATTC
TTTTATCTCGTTCTACTGCTGGTTCGGTCTGTAACTCACTCTAAGGTACT
TTCTCTAAATCGTATATCTCATGGTGTAGATGCGGTCCCGCCGGTGACGA
GTGTCCTTTTTGCCATTGGCACATGCGGTGGAGTTCTTGCTCCTGCGTAA
AGGGGTGTTGCTGGTTGTCAATTGTAACTGCTGATCGTATTGCAAGCATA
CATCACGTGGTATGTAAATTTGGATTTGACTCGAAATCTCCCGTTGATGT
AATCTTGTTGGTACTTTATATACAAGTGCATACTGAAGTCGGGTGCATAA
CACCAACATGGGGTACAGCGGATATAGTTATGGTTTGACCTTTGGAATTC
TAGTTCAACTGACTGTGACGGAGTAAGTTTACTGATGAAAATTTTATCGA
GATCGCCCCCCCCCATCTCCCCCTCCGGCCTGGCCTGGCCAGCCAATGAC
ATGCAAGTTCCAAACGGTAGGGGGAAAGATTCTGGAGGTGGAGGGACTAT
ACCCTCACACCACTGTGCAGCAT back to topCoding sequence (CDS) from alignment at H-paniculata_contig2198:10187..18259- >mRNA_H-paniculata_contig2198.5807.1 ID=mRNA_H-paniculata_contig2198.5807.1|Name=mRNA_H-paniculata_contig2198.5807.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1374bp|location=Sequence derived from alignment at H-paniculata_contig2198:10187..18259- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACAGCAGGACGTACTTGCCCGTCAAGGAAAATCGCGATGATGTTTC
CCAAGGGATCGTGTCATGTCGCATCAGCGCTGCTGGAGATACCAACATTG
TGAAAAAGGAGGCGCCGGAGGATACCGAGCAGGCAGCAGCAGCAGCAGCA
ACAACAGCAGCAGCCGATCCGCCGCCGAAGAGGTCATTGACTAAGTTAGC
AGTGCTCGAGATGGAGATCAGGAAGGTGGAGAAGGAACAAGGGGAGGTGC
AGGCGGCAATGGAGAAGAAACTTCCTCACCACGGCATGAGTGATCATATG
AACAGCAGGACGTACTTGCCCGTCAAGGAAAATCGCGATGATGTTTCCCA
AGGGATCGTGTCATGTCGCATCAGCGCTGCTGGAGATACCAACATTGTGA
AAAAGGAGGCGCCGGAGGATACCGAGCAGGCAGCAGCAGCAGCAGCAACA
ACAGCAGCAGCCGATCCGCCGCCGAAGAGGTCATTGACTAAGTTAGCAGT
GCTCGAGATGGAGATCAGGAAGGTGGAGAAGGAACAAGGGGAGGTGCAGG
CGGCAATGGAGAAGAAACTTCCTCACCACGGCATGAGTGATCATCGCATG
CTTGAGGACAACCTTCGGAGGCTTTGGAGAAAAGAGGAGCAGCTGAGGAC
GAAAGAGGAACAGCTCAGACAGAAGGAGCTTCTCCTACTCCGCTCCGCCG
ACAAAGTTCCGCTGGATGCCTCGCATGCTTGAGGACAACCTTCGGAGGCT
TTGGAGAAAAGAGGAGCAGCTGAGGACGAAAGAGGAACAGCTCAGACAGA
AGGAGCTTCTCCTACTCCGCTCCGCCGACAAAGTTCCGCTGGATGCCTGT
GAACCTGCGGTTTTGGTTGAGGGTGATGCCGATCGCATTGTTGATGCCGA
TGCCGATGCCAGTTCCAATGCCGATGTCGATGCCGATGCCACTTCTAATG
CCAATACGGATGTCAGCTCCAACGCAACTGCCGATGCCGATGCCGATGCC
GATTCCGTCCCACCTGTCCAAGAACCAGAGGTGAACCTGCGGTTTTGGTT
GAGGGTGATGCCGATCGCATTGTTGATGCCGATGCCGATGCCAGTTCCAA
TGCCGATGTCGATGCCGATGCCACTTCTAATGCCAATACGGATGTCAGCT
CCAACGCAACTGCCGATGCCGATGCCGATGCCGATTCCGTCCCACCTGTC
CAAGAACCAGAGCCAATGACATGCAAGTTCCAAACGGTAGGGGGAAAGAT
TCTGGAGGTGGAGGGACTATACCCTCACACCACTGTGCAGCATCCAATGA
CATGCAAGTTCCAAACGGTAGGGGGAAAGATTCTGGAGGTGGAGGGACTA
TACCCTCACACCACTGTGCAGCAT back to top
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